RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C KEL1P38853 1164 aaKnown RBP2.62□□□□□ -1.99
VPS20YMR077C FLC2P39719 783 aa2.62□□□□□ -1.99
VPS20YMR077C IES5P40060 125 aa2.62□□□□□ -1.99
VPS20YMR077C NDE2Q07500 545 aa2.62□□□□□ -1.99
VPS20YMR077C YPR022CQ12139 1133 aa2.62□□□□□ -1.99
VPS20YMR077C RFM1Q12192 310 aa2.62□□□□□ -1.99
VPS20YMR077C AVL9Q12500 764 aa2.62□□□□□ -1.99
VPS20YMR077C CCH1P50077 2039 aa2.62□□□□□ -1.99
VPS20YMR077C RPL31BP0C2H9 113 aaKnown RBP2.61□□□□□ -1.99
VPS20YMR077C REC114P32841 428 aa2.61□□□□□ -1.99
VPS20YMR077C FLC3P53121 802 aa2.61□□□□□ -1.99
VPS20YMR077C CAF130P53280 1122 aaPredicted RBP2.61□□□□□ -1.99
VPS20YMR077C YNR048WP53740 393 aa2.61□□□□□ -1.99
VPS20YMR077C IOC4Q04213 475 aa2.61□□□□□ -1.99
VPS20YMR077C IZH2Q12442 317 aa2.61□□□□□ -1.99
VPS20YMR077C YJR112W-AQ3E743 109 aa2.61□□□□□ -1.99
VPS20YMR077C ITR1P30605 584 aa2.6□□□□□ -1.99
VPS20YMR077C YGR066CP53242 292 aa2.6□□□□□ -1.99
VPS20YMR077C DSL1P53847 754 aa2.6□□□□□ -1.99
VPS20YMR077C CYS4P32582 507 aaKnown RBP2.59□□□□□ -1.99
VPS20YMR077C WBP1P33767 430 aaKnown RBP2.59□□□□□ -1.99
VPS20YMR077C ECM27P47144 725 aa2.59□□□□□ -1.99
VPS20YMR077C ARE2P53629 642 aaKnown RBP2.59□□□□□ -1.99
VPS20YMR077C ADA2Q02336 434 aa2.59□□□□□ -1.99
VPS20YMR077C NGL3Q03210 505 aa2.59□□□□□ -1.99
VPS20YMR077C JID1Q12350 301 aa2.59□□□□□ -1.99
VPS20YMR077C YDL007C-AQ2V2Q0 85 aa2.59□□□□□ -1.99
VPS20YMR077C ARG4P04076 463 aaPredicted RBP2.58□□□□□ -2
VPS20YMR077C ECM25P32525 599 aa2.58□□□□□ -2
VPS20YMR077C LYS14P40971 790 aa2.58□□□□□ -2
VPS20YMR077C MDE1P47095 244 aa2.58□□□□□ -2
VPS20YMR077C DUO1P53168 247 aaKnown RBP2.58□□□□□ -2
VPS20YMR077C TEF1P02994 458 aaKnown RBP2.57□□□□□ -2
VPS20YMR077C RML2P32611 393 aa2.57□□□□□ -2
VPS20YMR077C YER186CP40101 306 aa2.57□□□□□ -2
VPS20YMR077C YGL108CP53139 140 aa2.57□□□□□ -2
VPS20YMR077C CRH1P53301 507 aa2.57□□□□□ -2
VPS20YMR077C FRE4P53746 719 aa2.57□□□□□ -2
VPS20YMR077C SGT1Q08446 395 aa2.57□□□□□ -2
VPS20YMR077C HIS4P00815 799 aaKnown RBP2.56□□□□□ -2
VPS20YMR077C GAL80P04387 435 aa2.56□□□□□ -2
VPS20YMR077C RHO2P06781 192 aa2.56□□□□□ -2
VPS20YMR077C CBP6P07253 162 aaPredicted RBP2.56□□□□□ -2
VPS20YMR077C NAM2P11325 894 aa2.56□□□□□ -2
VPS20YMR077C ATP10P18496 279 aa2.56□□□□□ -2
VPS20YMR077C AAT2P23542 418 aaKnown RBP2.56□□□□□ -2
VPS20YMR077C PRR1P28708 518 aa2.56□□□□□ -2
VPS20YMR077C RTC2P38279 296 aa2.56□□□□□ -2
VPS20YMR077C HST1P53685 503 aa2.56□□□□□ -2
VPS20YMR077C MTQ1P53944 314 aa2.56□□□□□ -2
VPS20YMR077C MRPS16Q02608 121 aa2.56□□□□□ -2
VPS20YMR077C DNL4Q08387 944 aaPredicted RBP2.56□□□□□ -2
VPS20YMR077C YRM1Q12340 786 aa2.56□□□□□ -2
VPS20YMR077C CDC16P09798 840 aa2.55□□□□□ -2
VPS20YMR077C FMT1P32785 401 aa2.55□□□□□ -2
VPS20YMR077C SGN1P40561 250 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
VPS20YMR077C YML131WQ03102 365 aa2.55□□□□□ -2
VPS20YMR077C ATG16Q03818 150 aa2.55□□□□□ -2
VPS20YMR077C COX4P04037 155 aa2.54□□□□□ -2
VPS20YMR077C SEC53P07283 254 aaKnown RBP2.54□□□□□ -2
VPS20YMR077C IES6P32617 166 aa2.54□□□□□ -2
VPS20YMR077C MRE11P32829 692 aa2.54□□□□□ -2
VPS20YMR077C THI2P38141 450 aa2.54□□□□□ -2
VPS20YMR077C PFS2P42841 465 aaKnown RBP2.54□□□□□ -2
VPS20YMR077C YDR387CQ04162 555 aa2.54□□□□□ -2
VPS20YMR077C LIP2Q06005 328 aa2.54□□□□□ -2
VPS20YMR077C SEC39Q12745 709 aa2.54□□□□□ -2
VPS20YMR077C DFR1P07807 211 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
VPS20YMR077C RPI1P23250 407 aaKnown RBP2.53□□□□□ -2
VPS20YMR077C APE2P32454 952 aaKnown RBP2.53□□□□□ -2
VPS20YMR077C LYS1P38998 373 aaRIP-Chip data2.53□□□□□ -2not detected
VPS20YMR077C RMD9P53140 646 aaKnown RBP2.53□□□□□ -2
VPS20YMR077C VMS1Q04311 632 aaKnown RBP2.53□□□□□ -2
VPS20YMR077C HSP31Q04432 237 aa2.53□□□□□ -2
VPS20YMR077C RCN2Q12044 265 aa2.53□□□□□ -2
VPS20YMR077C HIR2P32480 875 aa2.52□□□□□ -2.01
VPS20YMR077C TFG2P41896 400 aaPredicted RBP2.52□□□□□ -2.01
VPS20YMR077C AHC1Q12433 566 aa2.52□□□□□ -2.01
VPS20YMR077C RTP1Q12751 981 aa2.52□□□□□ -2.01
VPS20YMR077C DPH2P32461 534 aa2.51□□□□□ -2.01
VPS20YMR077C DTR1P38125 572 aa2.51□□□□□ -2.01
VPS20YMR077C CCT2P39076 527 aaKnown RBP2.51□□□□□ -2.01
VPS20YMR077C RHO5P53879 331 aaKnown RBP2.51□□□□□ -2.01
VPS20YMR077C OPY2Q06810 360 aa2.51□□□□□ -2.01
VPS20YMR077C RPB5P20434 215 aa2.5□□□□□ -2.01
VPS20YMR077C RAD14P28519 371 aa2.5□□□□□ -2.01
VPS20YMR077C SMY1P32364 656 aaKnown RBP2.5□□□□□ -2.01
VPS20YMR077C PRP21P32524 280 aaPredicted RBP2.5□□□□□ -2.01
VPS20YMR077C RCK2P38623 610 aa2.5□□□□□ -2.01
VPS20YMR077C DLD2P46681 530 aaKnown RBP2.5□□□□□ -2.01
VPS20YMR077C YGR018CP53211 109 aa2.5□□□□□ -2.01
VPS20YMR077C YMR018WQ04364 514 aa2.5□□□□□ -2.01
VPS20YMR077C ADH1P00330 348 aaKnown RBP2.49□□□□□ -2.01
VPS20YMR077C AFG1P32317 509 aa2.49□□□□□ -2.01
VPS20YMR077C IME2P32581 645 aa2.49□□□□□ -2.01
VPS20YMR077C JLP2P40206 208 aa2.49□□□□□ -2.01
VPS20YMR077C YFR057WP43625 151 aa2.49□□□□□ -2.01
VPS20YMR077C PET130P47065 347 aa2.49□□□□□ -2.01
VPS20YMR077C YPS5P53057 165 aa2.49□□□□□ -2.01
VPS20YMR077C YPL107WQ02873 248 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms