RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS9	YML097C	GID7	P25569	745 aa		3.17	□□□□□ -1.9
VPS9	YML097C	CRM1	P30822	1084 aa	Known RBP	3.17	□□□□□ -1.9
VPS9	YML097C	SPC110	P32380	944 aa		3.17	□□□□□ -1.9
VPS9	YML097C	FRE1	P32791	686 aa		3.17	□□□□□ -1.9
VPS9	YML097C	SUR1	P33300	382 aa		3.17	□□□□□ -1.9
VPS9	YML097C	LEU5	P38702	357 aa		3.17	□□□□□ -1.9
VPS9	YML097C	GPI16	P38875	610 aa		3.17	□□□□□ -1.9
VPS9	YML097C	PHO86	P46956	311 aa		3.17	□□□□□ -1.9
VPS9	YML097C	YJR011C	P47086	261 aa	Predicted RBP	3.17	□□□□□ -1.9
VPS9	YML097C	SLD5	Q03406	294 aa		3.17	□□□□□ -1.9
VPS9	YML097C	YDR415C	Q04033	374 aa	Predicted RBP	3.17	□□□□□ -1.9
VPS9	YML097C	YFH1	Q07540	174 aa		3.17	□□□□□ -1.9
VPS9	YML097C	NOP6	Q07623	225 aa	Known RBP	3.17	□□□□□ -1.9
VPS9	YML097C	BSC1	Q12140	328 aa		3.17	□□□□□ -1.9
VPS9	YML097C	ADE4	P04046	510 aa	Known RBP	3.16	□□□□□ -1.9
VPS9	YML097C	NFT1	P0CE68	1218 aa		3.16	□□□□□ -1.9
VPS9	YML097C	MBR1	P23493	339 aa		3.16	□□□□□ -1.9
VPS9	YML097C	MGR1	P25573	417 aa		3.16	□□□□□ -1.9
VPS9	YML097C	GEX1	P25596	615 aa		3.16	□□□□□ -1.9
VPS9	YML097C	FAA1	P30624	700 aa	Known RBP	3.16	□□□□□ -1.9
VPS9	YML097C	UTR4	P32626	227 aa		3.16	□□□□□ -1.9
VPS9	YML097C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
VPS9	YML097C	PTK1	P36002	662 aa	Predicted RBP	3.16	□□□□□ -1.9
VPS9	YML097C	KAP104	P38217	918 aa	Known RBP	3.16	□□□□□ -1.9
VPS9	YML097C	SPP381	P38282	291 aa	Predicted RBP	3.16	□□□□□ -1.9
VPS9	YML097C	RFC3	P38629	340 aa		3.16	□□□□□ -1.9
VPS9	YML097C	OSH3	P38713	996 aa	Known RBP	3.16	□□□□□ -1.9
VPS9	YML097C	RRF1	P38771	230 aa		3.16	□□□□□ -1.9
VPS9	YML097C	ISC1	P40015	477 aa	Known RBP	3.16	□□□□□ -1.9
VPS9	YML097C	RTS2	P40962	232 aa		3.16	□□□□□ -1.9
VPS9	YML097C	TRS85	P46944	698 aa		3.16	□□□□□ -1.9
VPS9	YML097C	PHB2	P50085	310 aa		3.16	□□□□□ -1.9
VPS9	YML097C	PRM1	P53835	661 aa		3.16	□□□□□ -1.9
VPS9	YML097C	YNL181W	P53878	407 aa		3.16	□□□□□ -1.9
VPS9	YML097C	GIP3	Q03016	1276 aa		3.16	□□□□□ -1.9
VPS9	YML097C	YDR541C	Q03049	344 aa		3.16	□□□□□ -1.9
VPS9	YML097C	PRP3	Q03338	469 aa	Predicted RBP	3.16	□□□□□ -1.9
VPS9	YML097C	GSH2	Q08220	491 aa		3.16	□□□□□ -1.9
VPS9	YML097C	RTC5	Q12108	567 aa	Known RBP	3.16	□□□□□ -1.9
VPS9	YML097C	ILV5	P06168	395 aa	Known RBP	3.15	□□□□□ -1.9
VPS9	YML097C	SEC62	P21825	274 aa		3.15	□□□□□ -1.9
VPS9	YML097C	GRR1	P24814	1151 aa		3.15	□□□□□ -1.9
VPS9	YML097C	ILV6	P25605	309 aa	Known RBP	3.15	□□□□□ -1.9
VPS9	YML097C	BUB3	P26449	341 aa		3.15	□□□□□ -1.9
VPS9	YML097C	CYS4	P32582	507 aa	Known RBP	3.15	□□□□□ -1.9
VPS9	YML097C	YSC83	P32792	385 aa		3.15	□□□□□ -1.9
VPS9	YML097C	SRB2	P34162	210 aa		3.15	□□□□□ -1.9
VPS9	YML097C	YPK3	P38070	525 aa		3.15	□□□□□ -1.9
VPS9	YML097C	QDR3	P38227	689 aa		3.15	□□□□□ -1.9
VPS9	YML097C	SPC97	P38863	823 aa		3.15	□□□□□ -1.9
VPS9	YML097C	YER079W	P40052	210 aa	Known RBP	3.15	□□□□□ -1.9
VPS9	YML097C	FAU1	P40099	211 aa		3.15	□□□□□ -1.9
VPS9	YML097C	IAH1	P41734	238 aa		3.15	□□□□□ -1.9
VPS9	YML097C	ELP2	P42935	788 aa		3.15	□□□□□ -1.9
VPS9	YML097C	RPA34	P47006	233 aa	Predicted RBP	3.15	□□□□□ -1.9
VPS9	YML097C	ASN2	P49090	572 aa	Known RBP	3.15	□□□□□ -1.9
VPS9	YML097C	YGL082W	P53155	381 aa		3.15	□□□□□ -1.9
VPS9	YML097C	HST1	P53685	503 aa		3.15	□□□□□ -1.9
VPS9	YML097C	TDA7	P53882	636 aa	Predicted RBP	3.15	□□□□□ -1.9
VPS9	YML097C	SAM50	P53969	484 aa		3.15	□□□□□ -1.9
VPS9	YML097C	ABZ2	Q03266	374 aa		3.15	□□□□□ -1.9
VPS9	YML097C	MSS11	Q03825	758 aa		3.15	□□□□□ -1.9
VPS9	YML097C	REX4	Q08237	289 aa		3.15	□□□□□ -1.9
VPS9	YML097C	YLL056C	Q12177	298 aa		3.15	□□□□□ -1.9
VPS9	YML097C	YCR007C	P25354	239 aa		3.14	□□□□□ -1.91
VPS9	YML097C	HSP104	P31539	908 aa	Known RBP	3.14	□□□□□ -1.91
VPS9	YML097C	ACH1	P32316	526 aa		3.14	□□□□□ -1.91
VPS9	YML097C	RAD24	P32641	659 aa		3.14	□□□□□ -1.91
VPS9	YML097C	VPS17	P32913	551 aa		3.14	□□□□□ -1.91
VPS9	YML097C	RSM22	P36056	628 aa		3.14	□□□□□ -1.91
VPS9	YML097C	INM1	P38710	295 aa		3.14	□□□□□ -1.91
VPS9	YML097C	TOM71	P38825	639 aa	Known RBP	3.14	□□□□□ -1.91
VPS9	YML097C	STN1	P38960	494 aa		3.14	□□□□□ -1.91
VPS9	YML097C	GAT2	P40209	560 aa		3.14	□□□□□ -1.91
VPS9	YML097C	CFD1	P40558	293 aa		3.14	□□□□□ -1.91
VPS9	YML097C	AZF1	P41696	914 aa		3.14	□□□□□ -1.91
VPS9	YML097C	HMS2	P47175	358 aa		3.14	□□□□□ -1.91
VPS9	YML097C	ESBP6	P53918	673 aa		3.14	□□□□□ -1.91
VPS9	YML097C	UTP6	Q02354	440 aa	Known RBP	3.14	□□□□□ -1.91
VPS9	YML097C	VTC3	Q02725	835 aa		3.14	□□□□□ -1.91
VPS9	YML097C	ECI1	Q05871	280 aa		3.14	□□□□□ -1.91
VPS9	YML097C	LSP1	Q12230	341 aa	Known RBP	3.14	□□□□□ -1.91
VPS9	YML097C	ARP6	Q12509	438 aa		3.14	□□□□□ -1.91
VPS9	YML097C	NBL1	Q3E7Y6	73 aa		3.14	□□□□□ -1.91
VPS9	YML097C	PGK1	P00560	416 aa	Known RBP	3.13	□□□□□ -1.91
VPS9	YML097C	DST1	P07273	309 aa		3.13	□□□□□ -1.91
VPS9	YML097C	IMA3	P0CW40	589 aa		3.13	□□□□□ -1.91
VPS9	YML097C	IMA4	P0CW41	589 aa		3.13	□□□□□ -1.91
VPS9	YML097C	RAD57	P25301	460 aa		3.13	□□□□□ -1.91
VPS9	YML097C	NDI1	P32340	513 aa		3.13	□□□□□ -1.91
VPS9	YML097C	SMY1	P32364	656 aa	Known RBP	3.13	□□□□□ -1.91
VPS9	YML097C	ECM15	P35195	104 aa		3.13	□□□□□ -1.91
VPS9	YML097C	YNK1	P36010	153 aa	Known RBP	3.13	□□□□□ -1.91
VPS9	YML097C	FRE2	P36033	711 aa		3.13	□□□□□ -1.91
VPS9	YML097C	YCR041W	P37265	110 aa		3.13	□□□□□ -1.91
VPS9	YML097C	PCH2	P38126	564 aa		3.13	□□□□□ -1.91
VPS9	YML097C	MSG5	P38590	489 aa		3.13	□□□□□ -1.91
VPS9	YML097C	STP2	P38704	541 aa		3.13	□□□□□ -1.91
VPS9	YML097C	VPS52	P39904	641 aa		3.13	□□□□□ -1.91
VPS9	YML097C	XBP1	P40489	647 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms