RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A XYL2Q07993 356 aa12.15□□□□□ -0.46
LSM3YLR438C-A GPN2Q08726 347 aaPredicted RBP12.15□□□□□ -0.46
LSM3YLR438C-A YKL018C-AQ3E7A7 99 aa12.15□□□□□ -0.46
LSM3YLR438C-A SYP1P25623 870 aaKnown RBP12.14□□□□□ -0.47
LSM3YLR438C-A SRB5P32585 307 aa12.14□□□□□ -0.47
LSM3YLR438C-A SEC17P32602 292 aa12.14□□□□□ -0.47
LSM3YLR438C-A FAA3P39002 694 aa12.14□□□□□ -0.47
LSM3YLR438C-A JEM1P40358 645 aa12.14□□□□□ -0.47
LSM3YLR438C-A DIC1Q06143 298 aa12.14□□□□□ -0.47
LSM3YLR438C-A IRC13Q08630 104 aa12.14□□□□□ -0.47
LSM3YLR438C-A PUS9Q12069 462 aa12.14□□□□□ -0.47
LSM3YLR438C-A YPR022CQ12139 1133 aa12.14□□□□□ -0.47
LSM3YLR438C-A BMT6Q12291 365 aa12.14□□□□□ -0.47
LSM3YLR438C-A YPR064WQ12492 139 aa12.14□□□□□ -0.47
LSM3YLR438C-A STE7P06784 515 aa12.13□□□□□ -0.47
LSM3YLR438C-A UNG1P12887 359 aa12.13□□□□□ -0.47
LSM3YLR438C-A SLM5P25345 492 aaKnown RBP12.13□□□□□ -0.47
LSM3YLR438C-A NRP1P32770 719 aaKnown RBP RIP-Chip data12.13□□□□□ -0.47not detected
LSM3YLR438C-A CAT2P32796 670 aaKnown RBP12.13□□□□□ -0.47
LSM3YLR438C-A OAR1P35731 278 aa12.13□□□□□ -0.47
LSM3YLR438C-A NEO1P40527 1151 aa12.13□□□□□ -0.47
LSM3YLR438C-A YIL001WP40560 513 aa12.13□□□□□ -0.47
LSM3YLR438C-A PRM10P42946 383 aa12.13□□□□□ -0.47
LSM3YLR438C-A GET1P53192 235 aa12.13□□□□□ -0.47
LSM3YLR438C-A FHN1P53279 174 aa12.13□□□□□ -0.47
LSM3YLR438C-A SIZ1Q04195 904 aa12.13□□□□□ -0.47
LSM3YLR438C-A SPC2Q04969 178 aa12.13□□□□□ -0.47
LSM3YLR438C-A SKM1Q12469 655 aa12.13□□□□□ -0.47
LSM3YLR438C-A TY4B-PA0A0B7P3V8 1104 aa12.12□□□□□ -0.47
LSM3YLR438C-A RPS17AP02407 136 aaKnown RBP12.12□□□□□ -0.47
LSM3YLR438C-A RPS17BP14127 136 aaKnown RBP12.12□□□□□ -0.47
LSM3YLR438C-A TFC1P32367 649 aa12.12□□□□□ -0.47
LSM3YLR438C-A GPI1P53306 609 aa12.12□□□□□ -0.47
LSM3YLR438C-A GMC2Q06201 188 aa12.12□□□□□ -0.47
LSM3YLR438C-A PSR1Q07800 427 aa12.12□□□□□ -0.47
LSM3YLR438C-A YPR096CO13587 100 aa12.11□□□□□ -0.47
LSM3YLR438C-A RPL24AP04449 155 aaKnown RBP12.11□□□□□ -0.47
LSM3YLR438C-A MGR1P25573 417 aa12.11□□□□□ -0.47
LSM3YLR438C-A NTH1P32356 751 aa12.11□□□□□ -0.47
LSM3YLR438C-A SSO1P32867 290 aa12.11□□□□□ -0.47
LSM3YLR438C-A TDP1P38319 544 aa12.11□□□□□ -0.47
LSM3YLR438C-A MNL1P38888 796 aa12.11□□□□□ -0.47
LSM3YLR438C-A CFD1P40558 293 aa12.11□□□□□ -0.47
LSM3YLR438C-A RIM21P48565 533 aa12.11□□□□□ -0.47
LSM3YLR438C-A YNL033WP53964 284 aa12.11□□□□□ -0.47
LSM3YLR438C-A YNL019CP53975 284 aa12.11□□□□□ -0.47
LSM3YLR438C-A SVL3Q03088 825 aaKnown RBP12.11□□□□□ -0.47
LSM3YLR438C-A ATP2P00830 511 aaKnown RBP12.1□□□□□ -0.47
LSM3YLR438C-A MSS18P08593 268 aa12.1□□□□□ -0.47
LSM3YLR438C-A RAP1P11938 827 aa12.1□□□□□ -0.47
LSM3YLR438C-A OMA1P36163 345 aa12.1□□□□□ -0.47
LSM3YLR438C-A FAD1P38913 306 aa12.1□□□□□ -0.47
LSM3YLR438C-A VRG4P40107 337 aa12.1□□□□□ -0.47
LSM3YLR438C-A DIM1P41819 318 aaKnown RBP12.1□□□□□ -0.47
LSM3YLR438C-A ILM1P47155 203 aa12.1□□□□□ -0.47
LSM3YLR438C-A IBA57P47158 497 aa12.1□□□□□ -0.47
LSM3YLR438C-A RAD17P48581 401 aa12.1□□□□□ -0.47
LSM3YLR438C-A ROG1P53118 685 aa12.1□□□□□ -0.47
LSM3YLR438C-A SED5Q01590 340 aa12.1□□□□□ -0.47
LSM3YLR438C-A HFD1Q04458 532 aa12.1□□□□□ -0.47
LSM3YLR438C-A APC4Q04601 652 aa12.1□□□□□ -0.47
LSM3YLR438C-A ASA1Q06822 443 aa12.1□□□□□ -0.47
LSM3YLR438C-A YLR030WQ07967 263 aa12.1□□□□□ -0.47
LSM3YLR438C-A YOL131WQ08270 108 aa12.1□□□□□ -0.47
LSM3YLR438C-A POL2P21951 2222 aaKnown RBP12.09□□□□□ -0.47
LSM3YLR438C-A CBS2P14905 389 aa12.09□□□□□ -0.47
LSM3YLR438C-A SIN4P32259 974 aa12.09□□□□□ -0.47
LSM3YLR438C-A CDC12P32468 407 aaKnown RBP12.09□□□□□ -0.47
LSM3YLR438C-A NUP2P32499 720 aa12.09□□□□□ -0.47
LSM3YLR438C-A MRP8P35719 219 aa12.09□□□□□ -0.47
LSM3YLR438C-A DUG1P43616 481 aaKnown RBP12.09□□□□□ -0.47
LSM3YLR438C-A HOC1P47124 396 aa12.09□□□□□ -0.47
LSM3YLR438C-A PUN1Q06991 263 aa12.09□□□□□ -0.47
LSM3YLR438C-A ULA1Q12059 462 aa12.09□□□□□ -0.47
LSM3YLR438C-A COR1P07256 457 aa12.08□□□□□ -0.48
LSM3YLR438C-A SUI1P32911 108 aaKnown RBP12.08□□□□□ -0.48
LSM3YLR438C-A MNN2P38069 597 aa12.08□□□□□ -0.48
LSM3YLR438C-A RPL10P41805 221 aaKnown RBP12.08□□□□□ -0.48
LSM3YLR438C-A ALK1P43633 760 aaKnown RBP12.08□□□□□ -0.48
LSM3YLR438C-A COS6P53344 381 aa12.08□□□□□ -0.48
LSM3YLR438C-A MSC1Q03104 513 aa12.08□□□□□ -0.48
LSM3YLR438C-A GIC2Q06648 383 aa12.08□□□□□ -0.48
LSM3YLR438C-A BSC6Q08280 497 aa12.08□□□□□ -0.48
LSM3YLR438C-A YOL159CQ08300 171 aa12.08□□□□□ -0.48
LSM3YLR438C-A MMT2Q08970 484 aa12.08□□□□□ -0.48
LSM3YLR438C-A PIN2Q12057 282 aa12.08□□□□□ -0.48
LSM3YLR438C-A STT4P37297 1900 aa12.07□□□□□ -0.48
LSM3YLR438C-A IMG1P25626 169 aa12.07□□□□□ -0.48
LSM3YLR438C-A YJU2P28320 278 aaPredicted RBP12.07□□□□□ -0.48
LSM3YLR438C-A CTS1P29029 562 aa12.07□□□□□ -0.48
LSM3YLR438C-A SSH4P32343 579 aa12.07□□□□□ -0.48
LSM3YLR438C-A PEX6P33760 1030 aa12.07□□□□□ -0.48
LSM3YLR438C-A YRO2P38079 344 aa12.07□□□□□ -0.48
LSM3YLR438C-A BNA4P38169 460 aa12.07□□□□□ -0.48
LSM3YLR438C-A ERP6P53198 216 aa12.07□□□□□ -0.48
LSM3YLR438C-A NRM1P53718 249 aa12.07□□□□□ -0.48
LSM3YLR438C-A BCY1P07278 416 aaKnown RBP12.06□□□□□ -0.48
LSM3YLR438C-A ALG7P07286 448 aa12.06□□□□□ -0.48
LSM3YLR438C-A RPP1BP10622 106 aaKnown RBP12.06□□□□□ -0.48
LSM3YLR438C-A MRPL32P25348 183 aa12.06□□□□□ -0.48
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms