RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C RRN9P53437 365 aa7.12□□□□□ -1.27
AFG2YLR397C YDR131CQ03899 556 aa7.12□□□□□ -1.27
AFG2YLR397C YLR224WQ05947 369 aa7.12□□□□□ -1.27
AFG2YLR397C ECM7Q06200 448 aa7.12□□□□□ -1.27
AFG2YLR397C DSE3Q08729 430 aa7.12□□□□□ -1.27
AFG2YLR397C GRE2Q12068 342 aaKnown RBP7.12□□□□□ -1.27
AFG2YLR397C CIT2P08679 460 aa7.11□□□□□ -1.27
AFG2YLR397C HXT9P40885 567 aa7.11□□□□□ -1.27
AFG2YLR397C AAD10P47182 288 aa7.11□□□□□ -1.27
AFG2YLR397C HCH1P53834 153 aa7.11□□□□□ -1.27
AFG2YLR397C YMD8Q03697 442 aa7.11□□□□□ -1.27
AFG2YLR397C TRE2Q08693 809 aa7.11□□□□□ -1.27
AFG2YLR397C YOR365CQ08844 703 aa7.11□□□□□ -1.27
AFG2YLR397C ECM3Q99252 613 aa7.11□□□□□ -1.27
AFG2YLR397C TIM9O74700 87 aa7.11□□□□□ -1.27
AFG2YLR397C INO1P11986 533 aa7.11□□□□□ -1.27
AFG2YLR397C URA6P15700 204 aa7.11□□□□□ -1.27
AFG2YLR397C PUP1P25043 261 aa7.11□□□□□ -1.27
AFG2YLR397C FUN30P31380 1131 aa7.11□□□□□ -1.27
AFG2YLR397C CDC12P32468 407 aaKnown RBP7.11□□□□□ -1.27
AFG2YLR397C GLC3P32775 704 aa7.11□□□□□ -1.27
AFG2YLR397C FLO10P36170 1169 aa7.11□□□□□ -1.27
AFG2YLR397C SRO77P38163 1010 aa7.11□□□□□ -1.27
AFG2YLR397C BIG1P38813 335 aa7.11□□□□□ -1.27
AFG2YLR397C AIM18P38884 321 aa7.11□□□□□ -1.27
AFG2YLR397C YEL025CP39991 1188 aa7.11□□□□□ -1.27
AFG2YLR397C AGP3P43548 558 aa7.11□□□□□ -1.27
AFG2YLR397C YCL001W-AP87012 153 aa7.11□□□□□ -1.27
AFG2YLR397C ADI1Q03677 179 aa7.11□□□□□ -1.27
AFG2YLR397C VPS74Q06385 345 aa7.11□□□□□ -1.27
AFG2YLR397C RAD34Q06665 692 aa7.11□□□□□ -1.27
AFG2YLR397C YOL159CQ08300 171 aa7.11□□□□□ -1.27
AFG2YLR397C LCB4Q12246 624 aa7.11□□□□□ -1.27
AFG2YLR397C RKM5Q12367 367 aa7.11□□□□□ -1.27
AFG2YLR397C PRC1P00729 532 aa7.1□□□□□ -1.27
AFG2YLR397C RPP2BP02400 110 aaKnown RBP7.1□□□□□ -1.27
AFG2YLR397C CHS1P08004 1131 aa7.1□□□□□ -1.27
AFG2YLR397C FUS3P16892 353 aaKnown RBP7.1□□□□□ -1.27
AFG2YLR397C UGA1P17649 471 aa7.1□□□□□ -1.27
AFG2YLR397C ATP7P30902 174 aa7.1□□□□□ -1.27
AFG2YLR397C COQ2P32378 372 aa7.1□□□□□ -1.27
AFG2YLR397C BET3P36149 193 aa7.1□□□□□ -1.27
AFG2YLR397C SOL2P37262 315 aa7.1□□□□□ -1.27
AFG2YLR397C YBR013CP38215 129 aa7.1□□□□□ -1.27
AFG2YLR397C PEX28P38848 579 aa7.1□□□□□ -1.27
AFG2YLR397C YGR273CP53329 174 aa7.1□□□□□ -1.27
AFG2YLR397C PIB1Q06651 286 aa7.1□□□□□ -1.27
AFG2YLR397C TPO1Q07824 586 aa7.1□□□□□ -1.27
AFG2YLR397C PCC1Q3E833 88 aa7.1□□□□□ -1.27
AFG2YLR397C SIR1P21691 654 aa7.1□□□□□ -1.27
AFG2YLR397C BIO2P32451 375 aa7.1□□□□□ -1.27
AFG2YLR397C NGR1P32831 672 aaKnown RBP7.1□□□□□ -1.27
AFG2YLR397C PTM1P32857 523 aa7.1□□□□□ -1.27
AFG2YLR397C MAP2P38174 421 aaKnown RBP7.1□□□□□ -1.27
AFG2YLR397C FSH1P38777 243 aaKnown RBP7.1□□□□□ -1.27
AFG2YLR397C THI6P41835 540 aa7.1□□□□□ -1.27
AFG2YLR397C BUD13P46947 266 aaPredicted RBP7.1□□□□□ -1.27
AFG2YLR397C MRX5P47007 382 aa7.1□□□□□ -1.27
AFG2YLR397C TAF4P50105 388 aa7.1□□□□□ -1.27
AFG2YLR397C YGL039WP53183 348 aaKnown RBP7.1□□□□□ -1.27
AFG2YLR397C RTK1Q12100 620 aaPredicted RBP7.1□□□□□ -1.27
AFG2YLR397C NMD4Q12129 218 aa7.1□□□□□ -1.27
AFG2YLR397C NSL1Q12143 216 aa7.1□□□□□ -1.27
AFG2YLR397C SFM1Q12314 213 aa7.1□□□□□ -1.27
AFG2YLR397C KIN28P06242 306 aa7.09□□□□□ -1.27
AFG2YLR397C YPK1P12688 680 aaKnown RBP7.09□□□□□ -1.27
AFG2YLR397C EST1P17214 699 aaPredicted RBP7.09□□□□□ -1.27
AFG2YLR397C CPR4P25334 318 aa7.09□□□□□ -1.27
AFG2YLR397C KAR4P25583 335 aa7.09□□□□□ -1.27
AFG2YLR397C PPE1P38796 400 aa7.09□□□□□ -1.27
AFG2YLR397C VRG4P40107 337 aa7.09□□□□□ -1.27
AFG2YLR397C TOK1P40310 691 aa7.09□□□□□ -1.27
AFG2YLR397C PEP8P40335 379 aa7.09□□□□□ -1.27
AFG2YLR397C PAN6P40459 309 aa7.09□□□□□ -1.27
AFG2YLR397C SNG1P46950 547 aa7.09□□□□□ -1.27
AFG2YLR397C ALY2P47029 1046 aa7.09□□□□□ -1.27
AFG2YLR397C AIM22P47051 409 aa7.09□□□□□ -1.27
AFG2YLR397C NOP13P53883 403 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
AFG2YLR397C VPS9P54787 451 aa7.09□□□□□ -1.27
AFG2YLR397C SNA4Q07549 140 aa7.09□□□□□ -1.27
AFG2YLR397C PPM2Q08282 695 aa7.09□□□□□ -1.27
AFG2YLR397C GUP2Q08929 609 aa7.09□□□□□ -1.27
AFG2YLR397C ATX2Q12067 313 aa7.09□□□□□ -1.27
AFG2YLR397C MED1Q12321 566 aa7.09□□□□□ -1.27
AFG2YLR397C AHC1Q12433 566 aa7.09□□□□□ -1.27
AFG2YLR397C MDM12Q92328 271 aa7.09□□□□□ -1.27
AFG2YLR397C RPP1BP10622 106 aaKnown RBP7.09□□□□□ -1.28
AFG2YLR397C SEC12P11655 471 aa7.09□□□□□ -1.28
AFG2YLR397C TRX2P22803 104 aaKnown RBP7.09□□□□□ -1.28
AFG2YLR397C DBP1P24784 617 aaKnown RBP7.09□□□□□ -1.28
AFG2YLR397C SEF1P34228 1148 aa7.09□□□□□ -1.28
AFG2YLR397C HMT1P38074 348 aa7.09□□□□□ -1.28
AFG2YLR397C RMD6P39975 231 aa7.09□□□□□ -1.28
AFG2YLR397C PRM1P53835 661 aa7.09□□□□□ -1.28
AFG2YLR397C RMT2Q03305 412 aa7.09□□□□□ -1.28
AFG2YLR397C YMR209CQ03648 457 aa7.09□□□□□ -1.28
AFG2YLR397C YHC1Q05900 231 aaKnown RBP7.09□□□□□ -1.28
AFG2YLR397C YLR345WQ06137 509 aa7.09□□□□□ -1.28
AFG2YLR397C GRS2Q06817 618 aa7.09□□□□□ -1.28
AFG2YLR397C YPR084WQ06821 456 aa7.09□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 163 ms