RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W SYG1P40528 902 aa2.12□□□□□ -2.07
SEC22YLR268W WWM1P43582 211 aaKnown RBP2.12□□□□□ -2.07
SEC22YLR268W DLD2P46681 530 aaKnown RBP2.12□□□□□ -2.07
SEC22YLR268W URB2P47108 1174 aa2.12□□□□□ -2.07
SEC22YLR268W IBD2P53892 351 aa2.12□□□□□ -2.07
SEC22YLR268W IGO1P53897 168 aa2.12□□□□□ -2.07
SEC22YLR268W GIR2Q03768 265 aaPredicted RBP2.12□□□□□ -2.07
SEC22YLR268W TAP42Q04372 366 aa2.12□□□□□ -2.07
SEC22YLR268W VTA1Q06263 330 aa2.12□□□□□ -2.07
SEC22YLR268W MRPL35Q06678 367 aa2.12□□□□□ -2.07
SEC22YLR268W RRG1Q12167 365 aaPredicted RBP2.12□□□□□ -2.07
SEC22YLR268W YLR108CQ12259 485 aa2.12□□□□□ -2.07
SEC22YLR268W YOL159C-AQ3E769 90 aa2.12□□□□□ -2.07
SEC22YLR268W CLC1P17891 233 aa2.11□□□□□ -2.07
SEC22YLR268W REC107P21651 314 aa2.11□□□□□ -2.07
SEC22YLR268W NDI1P32340 513 aa2.11□□□□□ -2.07
SEC22YLR268W HXT3P32466 567 aaKnown RBP2.11□□□□□ -2.07
SEC22YLR268W REC114P32841 428 aa2.11□□□□□ -2.07
SEC22YLR268W MFT1P33441 392 aaKnown RBP2.11□□□□□ -2.07
SEC22YLR268W HCS1P34243 683 aa2.11□□□□□ -2.07
SEC22YLR268W BYE1P36106 594 aa2.11□□□□□ -2.07
SEC22YLR268W KEL1P38853 1164 aaKnown RBP2.11□□□□□ -2.07
SEC22YLR268W FAU1P40099 211 aa2.11□□□□□ -2.07
SEC22YLR268W VTC2P43585 828 aa2.11□□□□□ -2.07
SEC22YLR268W YGR149WP48236 432 aa2.11□□□□□ -2.07
SEC22YLR268W RPA49Q01080 415 aaPredicted RBP2.11□□□□□ -2.07
SEC22YLR268W YMR155WQ03795 547 aa2.11□□□□□ -2.07
SEC22YLR268W SOV1Q04748 898 aa2.11□□□□□ -2.07
SEC22YLR268W TSR1Q07381 788 aaKnown RBP2.11□□□□□ -2.07
SEC22YLR268W KEL3Q08979 651 aaPredicted RBP2.11□□□□□ -2.07
SEC22YLR268W YRF1-4O13559 1382 aa2.1□□□□□ -2.07
SEC22YLR268W ADH2P00331 348 aaKnown RBP2.1□□□□□ -2.07
SEC22YLR268W LEU4P06208 619 aaKnown RBP2.1□□□□□ -2.07
SEC22YLR268W GPH1P06738 902 aaKnown RBP2.1□□□□□ -2.07
SEC22YLR268W PET123P17558 318 aa2.1□□□□□ -2.07
SEC22YLR268W IDH2P28241 369 aaKnown RBP2.1□□□□□ -2.07
SEC22YLR268W GYP6P32806 458 aa2.1□□□□□ -2.07
SEC22YLR268W FRE2P36033 711 aa2.1□□□□□ -2.07
SEC22YLR268W LSM5P40089 93 aaKnown RBP2.1□□□□□ -2.07
SEC22YLR268W YMR147WP40218 223 aaKnown RBP2.1□□□□□ -2.07
SEC22YLR268W VMA13P41807 478 aaKnown RBP2.1□□□□□ -2.07
SEC22YLR268W SSU1P41930 458 aa2.1□□□□□ -2.07
SEC22YLR268W RMD9P53140 646 aaKnown RBP2.1□□□□□ -2.07
SEC22YLR268W TOF1P53840 1238 aa2.1□□□□□ -2.07
SEC22YLR268W NCS2P53923 493 aaPredicted RBP2.1□□□□□ -2.07
SEC22YLR268W PEX25Q02969 394 aa2.1□□□□□ -2.07
SEC22YLR268W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
SEC22YLR268W WTM1Q12363 437 aaKnown RBP2.1□□□□□ -2.07
SEC22YLR268W RKM5Q12367 367 aa2.1□□□□□ -2.07
SEC22YLR268W ATP10P18496 279 aa2.09□□□□□ -2.07
SEC22YLR268W PPH22P23595 377 aa2.09□□□□□ -2.07
SEC22YLR268W BUB3P26449 341 aa2.09□□□□□ -2.07
SEC22YLR268W CDC60P26637 1090 aaKnown RBP2.09□□□□□ -2.07
SEC22YLR268W NIP100P33420 868 aa2.09□□□□□ -2.07
SEC22YLR268W MID2P36027 376 aa2.09□□□□□ -2.07
SEC22YLR268W ARA1P38115 344 aa2.09□□□□□ -2.07
SEC22YLR268W THI2P38141 450 aa2.09□□□□□ -2.07
SEC22YLR268W TFG2P41896 400 aaPredicted RBP2.09□□□□□ -2.07
SEC22YLR268W FMS1P50264 508 aa2.09□□□□□ -2.07
SEC22YLR268W YGR250CP53316 781 aaKnown RBP2.09□□□□□ -2.07
SEC22YLR268W OGG1P53397 376 aaPredicted RBP2.09□□□□□ -2.07
SEC22YLR268W GOR1P53839 350 aa2.09□□□□□ -2.07
SEC22YLR268W RRP45Q05636 305 aaKnown RBP2.09□□□□□ -2.07
SEC22YLR268W HRI1Q05905 244 aaKnown RBP2.09□□□□□ -2.07
SEC22YLR268W THP3Q12049 470 aaKnown RBP2.09□□□□□ -2.07
SEC22YLR268W YLR278CQ05854 1341 aa2.09□□□□□ -2.08
SEC22YLR268W DAL2P25335 343 aa2.08□□□□□ -2.08
SEC22YLR268W RPC53P25441 422 aa2.08□□□□□ -2.08
SEC22YLR268W YCR051WP25631 222 aa2.08□□□□□ -2.08
SEC22YLR268W RML2P32611 393 aa2.08□□□□□ -2.08
SEC22YLR268W UTH1P36135 365 aa2.08□□□□□ -2.08
SEC22YLR268W PIM1P36775 1133 aa2.08□□□□□ -2.08
SEC22YLR268W NTC20P38302 140 aaPredicted RBP2.08□□□□□ -2.08
SEC22YLR268W VHC1P38329 1120 aa2.08□□□□□ -2.08
SEC22YLR268W AVT4P50944 713 aa2.08□□□□□ -2.08
SEC22YLR268W POP6P53218 158 aa2.08□□□□□ -2.08
SEC22YLR268W DSL1P53847 754 aa2.08□□□□□ -2.08
SEC22YLR268W KAP120Q02932 1032 aa2.08□□□□□ -2.08
SEC22YLR268W ARX1Q03862 593 aaKnown RBP2.08□□□□□ -2.08
SEC22YLR268W SIL1Q08199 421 aa2.08□□□□□ -2.08
SEC22YLR268W YPL199CQ08954 240 aa2.08□□□□□ -2.08
SEC22YLR268W RRD2Q12461 358 aa2.08□□□□□ -2.08
SEC22YLR268W FAB1P34756 2278 aa2.07□□□□□ -2.08
SEC22YLR268W RIP1P08067 215 aa2.07□□□□□ -2.08
SEC22YLR268W YAR066WP0CX18 203 aa2.07□□□□□ -2.08
SEC22YLR268W YHR214WP0CX19 203 aa2.07□□□□□ -2.08
SEC22YLR268W PDX1P16451 410 aa2.07□□□□□ -2.08
SEC22YLR268W DBF4P32325 704 aa2.07□□□□□ -2.08
SEC22YLR268W GLC7P32598 312 aaKnown RBP2.07□□□□□ -2.08
SEC22YLR268W YME2P32843 850 aa2.07□□□□□ -2.08
SEC22YLR268W STB6P36085 766 aa2.07□□□□□ -2.08
SEC22YLR268W ISC1P40015 477 aaKnown RBP2.07□□□□□ -2.08
SEC22YLR268W YGL138CP53122 345 aa2.07□□□□□ -2.08
SEC22YLR268W KTR5P53966 522 aaPredicted RBP2.07□□□□□ -2.08
SEC22YLR268W HAL1Q01766 294 aa2.07□□□□□ -2.08
SEC22YLR268W RMT2Q03305 412 aa2.07□□□□□ -2.08
SEC22YLR268W HSP31Q04432 237 aa2.07□□□□□ -2.08
SEC22YLR268W ERB1Q04660 807 aaKnown RBP2.07□□□□□ -2.08
SEC22YLR268W ROY1Q04847 553 aa2.07□□□□□ -2.08
SEC22YLR268W DON1Q05610 365 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms