RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C TMS1Q12116 473 aa4.18□□□□□ -1.74
SED5YLR026C NAT2P37293 288 aa4.17□□□□□ -1.74
SED5YLR026C SWD3P38123 315 aa4.17□□□□□ -1.74
SED5YLR026C ISC1P40015 477 aaKnown RBP4.17□□□□□ -1.74
SED5YLR026C PET130P47065 347 aa4.17□□□□□ -1.74
SED5YLR026C TMC1Q08422 150 aaPredicted RBP4.17□□□□□ -1.74
SED5YLR026C BRR1Q99177 341 aaPredicted RBP4.17□□□□□ -1.74
SED5YLR026C GEA1P47102 1408 aaPredicted RBP4.17□□□□□ -1.74
SED5YLR026C BCK1Q01389 1478 aa4.17□□□□□ -1.74
SED5YLR026C HHF1P02309 103 aaKnown RBP4.16□□□□□ -1.74
SED5YLR026C NOP4P37838 685 aaKnown RBP4.16□□□□□ -1.74
SED5YLR026C POP6P53218 158 aa4.16□□□□□ -1.74
SED5YLR026C GOR1P53839 350 aa4.16□□□□□ -1.74
SED5YLR026C VPS75P53853 264 aa4.16□□□□□ -1.74
SED5YLR026C SLG1P54867 378 aa4.16□□□□□ -1.74
SED5YLR026C RRN11Q04712 507 aa4.16□□□□□ -1.74
SED5YLR026C PAL1Q05518 499 aaKnown RBP4.16□□□□□ -1.74
SED5YLR026C ESA1Q08649 445 aa4.16□□□□□ -1.74
SED5YLR026C YDL007C-AQ2V2Q0 85 aa4.16□□□□□ -1.74
SED5YLR026C PDR11P40550 1411 aa4.15□□□□□ -1.74
SED5YLR026C RPL31BP0C2H9 113 aaKnown RBP4.15□□□□□ -1.75
SED5YLR026C CLN3P13365 580 aa4.15□□□□□ -1.75
SED5YLR026C CPR4P25334 318 aa4.15□□□□□ -1.75
SED5YLR026C YCR100CP25606 316 aa4.15□□□□□ -1.75
SED5YLR026C YMR147WP40218 223 aaKnown RBP4.15□□□□□ -1.75
SED5YLR026C YGR210CP42942 411 aa4.15□□□□□ -1.75
SED5YLR026C OCA1P50946 238 aaPredicted RBP4.15□□□□□ -1.75
SED5YLR026C BTN2P53286 410 aa4.15□□□□□ -1.75
SED5YLR026C SVL3Q03088 825 aaKnown RBP4.15□□□□□ -1.75
SED5YLR026C PDS5Q04264 1277 aa4.15□□□□□ -1.75
SED5YLR026C MRPL35Q06678 367 aa4.15□□□□□ -1.75
SED5YLR026C YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.15□□□□□ -1.75not detected
SED5YLR026C FOB1O13329 566 aa4.14□□□□□ -1.75
SED5YLR026C DFR1P07807 211 aaKnown RBP RIP-Chip data4.14□□□□□ -1.75not detected
SED5YLR026C MRE11P32829 692 aa4.14□□□□□ -1.75
SED5YLR026C YDR239CQ03780 787 aa4.14□□□□□ -1.75
SED5YLR026C PDR5P33302 1511 aaKnown RBP4.13□□□□□ -1.75
SED5YLR026C LEU4P06208 619 aaKnown RBP4.13□□□□□ -1.75
SED5YLR026C SAM1P10659 382 aaKnown RBP4.13□□□□□ -1.75
SED5YLR026C SAM2P19358 384 aaKnown RBP4.13□□□□□ -1.75
SED5YLR026C GFD2P25370 566 aaKnown RBP4.13□□□□□ -1.75
SED5YLR026C RRT2P38332 387 aa4.13□□□□□ -1.75
SED5YLR026C YEL057CP39983 233 aa4.13□□□□□ -1.75
SED5YLR026C TMA108P40462 946 aa4.13□□□□□ -1.75
SED5YLR026C OGG1P53397 376 aaPredicted RBP4.13□□□□□ -1.75
SED5YLR026C TSR1Q07381 788 aaKnown RBP4.13□□□□□ -1.75
SED5YLR026C RRG7Q08774 242 aaPredicted RBP4.13□□□□□ -1.75
SED5YLR026C CST26P38226 397 aa4.12□□□□□ -1.75
SED5YLR026C MET28P40573 187 aa4.12□□□□□ -1.75
SED5YLR026C TRS85P46944 698 aa4.12□□□□□ -1.75
SED5YLR026C URB2P47108 1174 aa4.12□□□□□ -1.75
SED5YLR026C ARE2P53629 642 aaKnown RBP4.12□□□□□ -1.75
SED5YLR026C YPL199CQ08954 240 aa4.12□□□□□ -1.75
SED5YLR026C HRT3Q12347 344 aa4.12□□□□□ -1.75
SED5YLR026C GCN4P03069 281 aa4.11□□□□□ -1.75
SED5YLR026C YAR066WP0CX18 203 aa4.11□□□□□ -1.75
SED5YLR026C YHR214WP0CX19 203 aa4.11□□□□□ -1.75
SED5YLR026C CRM1P30822 1084 aaKnown RBP4.11□□□□□ -1.75
SED5YLR026C YBR225WP38321 900 aa4.11□□□□□ -1.75
SED5YLR026C PTH1P38876 190 aaKnown RBP4.11□□□□□ -1.75
SED5YLR026C TIS11P47977 285 aa4.11□□□□□ -1.75
SED5YLR026C SDT1P53078 280 aa4.11□□□□□ -1.75
SED5YLR026C YGL108CP53139 140 aa4.11□□□□□ -1.75
SED5YLR026C TOF1P53840 1238 aa4.11□□□□□ -1.75
SED5YLR026C ODC1Q03028 310 aa4.11□□□□□ -1.75
SED5YLR026C IMH1Q06704 911 aaKnown RBP4.11□□□□□ -1.75
SED5YLR026C BSC6Q08280 497 aa4.11□□□□□ -1.75
SED5YLR026C RRD2Q12461 358 aa4.11□□□□□ -1.75
SED5YLR026C SRB8P25648 1427 aa4.11□□□□□ -1.75
SED5YLR026C ADH2P00331 348 aaKnown RBP4.1□□□□□ -1.75
SED5YLR026C ISY1P21374 235 aaPredicted RBP4.1□□□□□ -1.75
SED5YLR026C CBP4P37267 147 aa4.1□□□□□ -1.75
SED5YLR026C MTC6P38849 526 aa4.1□□□□□ -1.75
SED5YLR026C OST1P41543 476 aaKnown RBP4.1□□□□□ -1.75
SED5YLR026C WWM1P43582 211 aaKnown RBP4.1□□□□□ -1.75
SED5YLR026C MHR1Q06630 226 aa4.1□□□□□ -1.75
SED5YLR026C YLR108CQ12259 485 aa4.1□□□□□ -1.75
SED5YLR026C SEC39Q12745 709 aa4.1□□□□□ -1.75
SED5YLR026C MET8P15807 274 aa4.09□□□□□ -1.75
SED5YLR026C THI2P38141 450 aa4.09□□□□□ -1.75
SED5YLR026C RMD8P43620 662 aa4.09□□□□□ -1.75
SED5YLR026C IBD2P53892 351 aa4.09□□□□□ -1.75
SED5YLR026C KTR5P53966 522 aaPredicted RBP4.09□□□□□ -1.75
SED5YLR026C PNG1Q02890 363 aa4.09□□□□□ -1.75
SED5YLR026C KRE5P22023 1365 aa4.09□□□□□ -1.75
SED5YLR026C RRP5Q05022 1729 aaKnown RBP4.09□□□□□ -1.76
SED5YLR026C GCN2P15442 1659 aa4.08□□□□□ -1.76
SED5YLR026C ARO2P28777 376 aaKnown RBP4.08□□□□□ -1.76
SED5YLR026C PIM1P36775 1133 aa4.08□□□□□ -1.76
SED5YLR026C YCR041WP37265 110 aa4.08□□□□□ -1.76
SED5YLR026C MIX23P38162 196 aa4.08□□□□□ -1.76
SED5YLR026C REE1P40893 198 aa4.08□□□□□ -1.76
SED5YLR026C YML133CQ03099 1374 aa4.08□□□□□ -1.76
SED5YLR026C YLL067CQ07888 1374 aa4.08□□□□□ -1.76
SED5YLR026C BUD21Q08492 214 aaPredicted RBP4.08□□□□□ -1.76
SED5YLR026C YLL066CQ99208 1374 aa4.08□□□□□ -1.76
SED5YLR026C ATP10P18496 279 aa4.07□□□□□ -1.76
SED5YLR026C HXT1P32465 570 aa4.07□□□□□ -1.76
SED5YLR026C SDH3P33421 198 aa4.07□□□□□ -1.76
SED5YLR026C TWF1P53250 332 aa4.07□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms