RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C HXT5P38695 592 aa2.3□□□□□ -2.04
VPS13YLL040C YHR202WP38887 602 aa2.3□□□□□ -2.04
VPS13YLL040C PRM5P40476 318 aa2.3□□□□□ -2.04
VPS13YLL040C YDR132CQ03900 495 aa2.3□□□□□ -2.04
VPS13YLL040C PPN1Q04119 674 aa2.3□□□□□ -2.04
VPS13YLL040C YLR345WQ06137 509 aa2.3□□□□□ -2.04
VPS13YLL040C BUD20Q08004 166 aaPredicted RBP2.3□□□□□ -2.04
VPS13YLL040C MDY2Q12285 212 aa2.3□□□□□ -2.04
VPS13YLL040C FRE6Q12473 712 aa2.3□□□□□ -2.04
VPS13YLL040C RHO1P06780 209 aaKnown RBP2.3□□□□□ -2.04
VPS13YLL040C CHO1P08456 276 aa2.3□□□□□ -2.04
VPS13YLL040C UBX7P38349 436 aa2.3□□□□□ -2.04
VPS13YLL040C XDJ1P39102 459 aa2.3□□□□□ -2.04
VPS13YLL040C COS10P52924 374 aa2.3□□□□□ -2.04
VPS13YLL040C SCY1P53009 804 aa2.3□□□□□ -2.04
VPS13YLL040C POP6P53218 158 aa2.3□□□□□ -2.04
VPS13YLL040C ZRG17P53735 605 aa2.3□□□□□ -2.04
VPS13YLL040C TAF12Q03761 539 aa2.3□□□□□ -2.04
VPS13YLL040C MRI1Q06489 411 aaKnown RBP2.3□□□□□ -2.04
VPS13YLL040C PUS9Q12069 462 aa2.3□□□□□ -2.04
VPS13YLL040C CDC23P16522 626 aa2.3□□□□□ -2.04
VPS13YLL040C CCR4P31384 837 aaKnown RBP2.3□□□□□ -2.04
VPS13YLL040C ACH1P32316 526 aa2.3□□□□□ -2.04
VPS13YLL040C PUP2P32379 260 aa2.3□□□□□ -2.04
VPS13YLL040C VID24P38263 362 aa2.3□□□□□ -2.04
VPS13YLL040C ERV46P39727 415 aa2.3□□□□□ -2.04
VPS13YLL040C MNN5P46982 586 aa2.3□□□□□ -2.04
VPS13YLL040C GTO1P48239 356 aa2.3□□□□□ -2.04
VPS13YLL040C MRK1P50873 501 aa2.3□□□□□ -2.04
VPS13YLL040C MNT4P53745 580 aa2.3□□□□□ -2.04
VPS13YLL040C MRPL35Q06678 367 aa2.3□□□□□ -2.04
VPS13YLL040C FLO9P39712 1322 aa2.29□□□□□ -2.04
VPS13YLL040C CIN8P27895 1000 aa2.29□□□□□ -2.04
VPS13YLL040C HSL7P38274 827 aa2.29□□□□□ -2.04
VPS13YLL040C YHL026CP38740 315 aa2.29□□□□□ -2.04
VPS13YLL040C ERC1P38767 581 aa2.29□□□□□ -2.04
VPS13YLL040C YAR028WP39548 234 aa2.29□□□□□ -2.04
VPS13YLL040C RTT105P40063 208 aa2.29□□□□□ -2.04
VPS13YLL040C FAA4P47912 694 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C PSP2P50109 593 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C DUS1P53759 423 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C ECM22Q05958 814 aaPredicted RBP2.29□□□□□ -2.04
VPS13YLL040C GPI11Q06636 219 aa2.29□□□□□ -2.04
VPS13YLL040C YDR157WA0A023PZE8 133 aa2.29□□□□□ -2.04
VPS13YLL040C HIS1P00498 297 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C COQ2P32378 372 aa2.29□□□□□ -2.04
VPS13YLL040C REG2P38232 338 aa2.29□□□□□ -2.04
VPS13YLL040C COS8P38723 381 aa2.29□□□□□ -2.04
VPS13YLL040C PTI1P39927 425 aaPredicted RBP2.29□□□□□ -2.04
VPS13YLL040C SIP4P46954 829 aa2.29□□□□□ -2.04
VPS13YLL040C AIM22P47051 409 aa2.29□□□□□ -2.04
VPS13YLL040C YJL043WP47053 257 aa2.29□□□□□ -2.04
VPS13YLL040C YDR249CQ03787 373 aa2.29□□□□□ -2.04
VPS13YLL040C CTK1Q03957 528 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C IPP1P00817 287 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C PET54P10834 293 aa2.29□□□□□ -2.04
VPS13YLL040C SEN2P16658 377 aa2.29□□□□□ -2.04
VPS13YLL040C EPT1P22140 391 aa2.29□□□□□ -2.04
VPS13YLL040C MSS1P32559 526 aaPredicted RBP2.29□□□□□ -2.04
VPS13YLL040C LIP5P32875 414 aa2.29□□□□□ -2.04
VPS13YLL040C PDX3P38075 228 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C YBR063CP38083 404 aa2.29□□□□□ -2.04
VPS13YLL040C SEN34P39707 275 aa2.29□□□□□ -2.04
VPS13YLL040C YIL161WP40449 235 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C KTR6P54070 446 aa2.29□□□□□ -2.04
VPS13YLL040C DML1Q03652 475 aa2.29□□□□□ -2.04
VPS13YLL040C APC4Q04601 652 aa2.29□□□□□ -2.04
VPS13YLL040C RTN1Q04947 295 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C RSF1Q05043 376 aa2.29□□□□□ -2.04
VPS13YLL040C MRX4Q12467 430 aa2.29□□□□□ -2.04
VPS13YLL040C CLN2P20438 545 aa2.29□□□□□ -2.04
VPS13YLL040C RPS1BP23248 255 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C DHR2P36009 735 aaPredicted RBP2.29□□□□□ -2.04
VPS13YLL040C MMF1P40185 145 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C ATH1P48016 1211 aa2.29□□□□□ -2.04
VPS13YLL040C HOS2P53096 452 aaPredicted RBP2.29□□□□□ -2.04
VPS13YLL040C GTF1P53260 183 aaPredicted RBP2.29□□□□□ -2.04
VPS13YLL040C SLI1P53304 468 aa2.29□□□□□ -2.04
VPS13YLL040C YNR063WP53749 607 aa2.29□□□□□ -2.04
VPS13YLL040C CDC14Q00684 551 aa2.29□□□□□ -2.04
VPS13YLL040C YOR289WQ12012 251 aaPredicted RBP2.29□□□□□ -2.04
VPS13YLL040C BTS1Q12051 335 aa2.29□□□□□ -2.04
VPS13YLL040C HTZ1Q12692 134 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C YBL113CQ7M4S9 792 aa2.29□□□□□ -2.04
VPS13YLL040C YCL068CP25593 260 aa2.29□□□□□ -2.04
VPS13YLL040C ACP1P32463 125 aa2.29□□□□□ -2.04
VPS13YLL040C AIM46P38885 310 aa2.29□□□□□ -2.04
VPS13YLL040C ICE2P40499 491 aa2.29□□□□□ -2.04
VPS13YLL040C SSY5P47002 699 aa2.29□□□□□ -2.04
VPS13YLL040C UPF3P48412 387 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C YPL071CQ02864 156 aa2.29□□□□□ -2.04
VPS13YLL040C GPM1P00950 247 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C YAR066WP0CX18 203 aa2.29□□□□□ -2.04
VPS13YLL040C YHR214WP0CX19 203 aa2.29□□□□□ -2.04
VPS13YLL040C KAR1P11927 433 aa2.29□□□□□ -2.04
VPS13YLL040C UNG1P12887 359 aa2.29□□□□□ -2.04
VPS13YLL040C CPR4P25334 318 aa2.29□□□□□ -2.04
VPS13YLL040C GUT1P32190 709 aa2.29□□□□□ -2.04
VPS13YLL040C YSC84P32793 468 aa2.29□□□□□ -2.04
VPS13YLL040C ZRT3P34240 503 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms