RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	GUF1	P46943	645 aa		5.18	□□□□□ -1.58
SKG1	YKR100C	YMR018W	Q04364	514 aa		5.18	□□□□□ -1.58
SKG1	YKR100C	RDR1	Q08904	546 aa		5.18	□□□□□ -1.58
SKG1	YKR100C	SGT2	Q12118	346 aa	Known RBP	5.18	□□□□□ -1.58
SKG1	YKR100C	MAK31	P23059	88 aa		5.17	□□□□□ -1.58
SKG1	YKR100C	ERG1	P32476	496 aa	Known RBP	5.17	□□□□□ -1.58
SKG1	YKR100C	PTH2	P34222	208 aa		5.17	□□□□□ -1.58
SKG1	YKR100C	FIS1	P40515	155 aa		5.17	□□□□□ -1.58
SKG1	YKR100C	STR3	P53101	465 aa	Known RBP	5.17	□□□□□ -1.58
SKG1	YKR100C	YNL146W	P53906	100 aa		5.17	□□□□□ -1.58
SKG1	YKR100C	PRM6	Q04705	352 aa		5.17	□□□□□ -1.58
SKG1	YKR100C	ECM7	Q06200	448 aa		5.17	□□□□□ -1.58
SKG1	YKR100C	HSP42	Q12329	375 aa		5.17	□□□□□ -1.58
SKG1	YKR100C	RPB2	P08518	1224 aa	Known RBP	5.16	□□□□□ -1.58
SKG1	YKR100C	CDC24	P11433	854 aa	Predicted RBP	5.16	□□□□□ -1.58
SKG1	YKR100C	PRR1	P28708	518 aa		5.16	□□□□□ -1.58
SKG1	YKR100C	SNU114	P36048	1008 aa	Known RBP	5.16	□□□□□ -1.58
SKG1	YKR100C	PSY4	P38193	441 aa		5.16	□□□□□ -1.58
SKG1	YKR100C	ANS1	P38832	159 aa		5.16	□□□□□ -1.58
SKG1	YKR100C	ELO1	P39540	310 aa		5.16	□□□□□ -1.58
SKG1	YKR100C	YER130C	P39959	443 aa		5.16	□□□□□ -1.58
SKG1	YKR100C	HUA2	Q12134	243 aa		5.16	□□□□□ -1.58
SKG1	YKR100C	PHD1	P36093	366 aa		5.15	□□□□□ -1.59
SKG1	YKR100C	SPC34	P36131	295 aa		5.15	□□□□□ -1.59
SKG1	YKR100C	KRE9	P39005	276 aa		5.15	□□□□□ -1.59
SKG1	YKR100C	UIP3	P39547	235 aa		5.15	□□□□□ -1.59
SKG1	YKR100C	YJL068C	P40363	299 aa		5.15	□□□□□ -1.59
SKG1	YKR100C	SPG5	P42933	373 aa		5.15	□□□□□ -1.59
SKG1	YKR100C	MRX6	P48564	524 aa		5.15	□□□□□ -1.59
SKG1	YKR100C	GTR1	Q00582	310 aa		5.15	□□□□□ -1.59
SKG1	YKR100C	MUB1	Q03162	620 aa		5.15	□□□□□ -1.59
SKG1	YKR100C	IES4	Q08561	116 aa		5.15	□□□□□ -1.59
SKG1	YKR100C	SRO7	Q12038	1033 aa		5.15	□□□□□ -1.59
SKG1	YKR100C	YBR298C-A	Q8TGK4	73 aa		5.15	□□□□□ -1.59
SKG1	YKR100C	CLN3	P13365	580 aa		5.14	□□□□□ -1.59
SKG1	YKR100C	MRP20	P32387	263 aa		5.14	□□□□□ -1.59
SKG1	YKR100C	YBR225W	P38321	900 aa		5.14	□□□□□ -1.59
SKG1	YKR100C	RRP3	P38712	501 aa	Known RBP	5.14	□□□□□ -1.59
SKG1	YKR100C	UBA4	P38820	440 aa		5.14	□□□□□ -1.59
SKG1	YKR100C	SER33	P40510	469 aa		5.14	□□□□□ -1.59
SKG1	YKR100C	DIM1	P41819	318 aa	Known RBP	5.14	□□□□□ -1.59
SKG1	YKR100C	PIL1	P53252	339 aa	Known RBP	5.14	□□□□□ -1.59
SKG1	YKR100C	RCO1	Q04779	684 aa		5.14	□□□□□ -1.59
SKG1	YKR100C	PSR2	Q07949	397 aa		5.14	□□□□□ -1.59
SKG1	YKR100C	BSC6	Q08280	497 aa		5.14	□□□□□ -1.59
SKG1	YKR100C	MRS3	P10566	314 aa		5.13	□□□□□ -1.59
SKG1	YKR100C	ALY1	P36117	915 aa		5.13	□□□□□ -1.59
SKG1	YKR100C	BUR6	P40096	142 aa		5.13	□□□□□ -1.59
SKG1	YKR100C	SLZ1	P40167	298 aa		5.13	□□□□□ -1.59
SKG1	YKR100C	RTT102	P53330	157 aa		5.13	□□□□□ -1.59
SKG1	YKR100C	YOR387C	Q08910	206 aa		5.13	□□□□□ -1.59
SKG1	YKR100C	GPM2	Q12008	311 aa		5.13	□□□□□ -1.59
SKG1	YKR100C	TKL2	P33315	681 aa		5.12	□□□□□ -1.59
SKG1	YKR100C	DIA4	P38705	446 aa	Predicted RBP	5.12	□□□□□ -1.59
SKG1	YKR100C	AVT2	P39981	480 aa		5.12	□□□□□ -1.59
SKG1	YKR100C	CAF130	P53280	1122 aa	Predicted RBP	5.12	□□□□□ -1.59
SKG1	YKR100C	INA17	Q02888	182 aa		5.12	□□□□□ -1.59
SKG1	YKR100C	PEX25	Q02969	394 aa		5.12	□□□□□ -1.59
SKG1	YKR100C	MSS11	Q03825	758 aa		5.12	□□□□□ -1.59
SKG1	YKR100C	CLP1	Q08685	445 aa	Predicted RBP	5.12	□□□□□ -1.59
SKG1	YKR100C	SPT15	P13393	240 aa	Known RBP	5.11	□□□□□ -1.59
SKG1	YKR100C	PRP16	P15938	1071 aa	Predicted RBP	5.11	□□□□□ -1.59
SKG1	YKR100C	PSO2	P30620	661 aa		5.11	□□□□□ -1.59
SKG1	YKR100C	ACH1	P32316	526 aa		5.11	□□□□□ -1.59
SKG1	YKR100C	TAF14	P35189	244 aa		5.11	□□□□□ -1.59
SKG1	YKR100C	OSH3	P38713	996 aa	Known RBP	5.11	□□□□□ -1.59
SKG1	YKR100C	IES5	P40060	125 aa		5.11	□□□□□ -1.59
SKG1	YKR100C	AXL1	P40851	1208 aa		5.11	□□□□□ -1.59
SKG1	YKR100C	RPS10B	P46784	105 aa	Known RBP	5.11	□□□□□ -1.59
SKG1	YKR100C	MLC1	P53141	149 aa		5.11	□□□□□ -1.59
SKG1	YKR100C	CDC39	P25655	2108 aa	Known RBP	5.11	□□□□□ -1.59
SKG1	YKR100C	SLC1	P33333	303 aa		5.1	□□□□□ -1.59
SKG1	YKR100C	SHE3	P38272	425 aa	Known RBP	5.1	□□□□□ -1.59
SKG1	YKR100C	YER010C	P40011	234 aa		5.1	□□□□□ -1.59
SKG1	YKR100C	SHQ1	P40486	507 aa	Predicted RBP	5.1	□□□□□ -1.59
SKG1	YKR100C	YJR030C	P47101	745 aa		5.1	□□□□□ -1.59
SKG1	YKR100C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
SKG1	YKR100C	SNO4	Q04902	237 aa		5.1	□□□□□ -1.59
SKG1	YKR100C	RPS10A	Q08745	105 aa	Predicted RBP	5.1	□□□□□ -1.59
SKG1	YKR100C	HSP33	Q08914	237 aa	Known RBP	5.1	□□□□□ -1.59
SKG1	YKR100C	HSP32	Q08992	237 aa		5.1	□□□□□ -1.59
SKG1	YKR100C	ILV1	P00927	576 aa	Known RBP	5.09	□□□□□ -1.59
SKG1	YKR100C	MRS6	P32864	603 aa	Known RBP	5.09	□□□□□ -1.59
SKG1	YKR100C	YOX1	P34161	385 aa		5.09	□□□□□ -1.59
SKG1	YKR100C	MMS4	P38257	691 aa		5.09	□□□□□ -1.59
SKG1	YKR100C	TSC10	P38342	320 aa		5.09	□□□□□ -1.59
SKG1	YKR100C	AXL2	P38928	823 aa		5.09	□□□□□ -1.59
SKG1	YKR100C	TIM17	P39515	158 aa		5.09	□□□□□ -1.59
SKG1	YKR100C	ALK1	P43633	760 aa	Known RBP	5.09	□□□□□ -1.59
SKG1	YKR100C	DIC1	Q06143	298 aa		5.09	□□□□□ -1.59
SKG1	YKR100C	CDD1	Q06549	142 aa		5.09	□□□□□ -1.59
SKG1	YKR100C	SHS1	Q07657	551 aa		5.09	□□□□□ -1.59
SKG1	YKR100C	PPT2	Q12036	173 aa		5.09	□□□□□ -1.59
SKG1	YKR100C	NKP1	Q12493	238 aa		5.09	□□□□□ -1.59
SKG1	YKR100C	YOL087C	Q99247	1116 aa		5.09	□□□□□ -1.59
SKG1	YKR100C	CDC16	P09798	840 aa		5.08	□□□□□ -1.6
SKG1	YKR100C	SEC63	P14906	663 aa		5.08	□□□□□ -1.6
SKG1	YKR100C	SGE1	P33335	543 aa		5.08	□□□□□ -1.6
SKG1	YKR100C	RSM22	P36056	628 aa		5.08	□□□□□ -1.6
SKG1	YKR100C	SOL2	P37262	315 aa		5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms