RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W VMA13P41807 478 aaKnown RBP2.56□□□□□ -2
CIC1YHR052W TFG2P41896 400 aaPredicted RBP2.56□□□□□ -2
CIC1YHR052W HXT11P54862 567 aa2.56□□□□□ -2
CIC1YHR052W RSN1Q03516 953 aa2.56□□□□□ -2
CIC1YHR052W TSA2Q04120 196 aa2.56□□□□□ -2
CIC1YHR052W WTM1Q12363 437 aaKnown RBP2.56□□□□□ -2
CIC1YHR052W TRP1P00912 224 aa2.55□□□□□ -2
CIC1YHR052W RAD14P28519 371 aa2.55□□□□□ -2
CIC1YHR052W ECM25P32525 599 aa2.55□□□□□ -2
CIC1YHR052W REC114P32841 428 aa2.55□□□□□ -2
CIC1YHR052W CMC1P36064 111 aa2.55□□□□□ -2
CIC1YHR052W CCT2P39076 527 aaKnown RBP2.55□□□□□ -2
CIC1YHR052W YGR149WP48236 432 aa2.55□□□□□ -2
CIC1YHR052W YMR181CQ03231 154 aa2.55□□□□□ -2
CIC1YHR052W YLR278CQ05854 1341 aa2.55□□□□□ -2
CIC1YHR052W IMH1Q06704 911 aaKnown RBP2.55□□□□□ -2
CIC1YHR052W ATG29Q12092 213 aa2.55□□□□□ -2
CIC1YHR052W YPR022CQ12139 1133 aa2.55□□□□□ -2
CIC1YHR052W PKH2Q12236 1081 aaKnown RBP2.55□□□□□ -2
CIC1YHR052W PCL1P24867 279 aa2.54□□□□□ -2
CIC1YHR052W ITR1P30605 584 aa2.54□□□□□ -2
CIC1YHR052W NIP100P33420 868 aa2.54□□□□□ -2
CIC1YHR052W YBR137WP38276 179 aa2.54□□□□□ -2
CIC1YHR052W SPO22P40511 975 aa2.54□□□□□ -2
CIC1YHR052W RMD9P53140 646 aaKnown RBP2.54□□□□□ -2
CIC1YHR052W DSL1P53847 754 aa2.54□□□□□ -2
CIC1YHR052W PPM1Q04081 328 aa2.54□□□□□ -2
CIC1YHR052W TIM18Q08749 192 aa2.54□□□□□ -2
CIC1YHR052W NFT1P0CE68 1218 aa2.53□□□□□ -2
CIC1YHR052W APE2P32454 952 aaKnown RBP2.53□□□□□ -2
CIC1YHR052W PRP21P32524 280 aaPredicted RBP2.53□□□□□ -2
CIC1YHR052W MNS1P32906 549 aa2.53□□□□□ -2
CIC1YHR052W MET18P40469 1032 aa2.53□□□□□ -2
CIC1YHR052W HXT14P42833 540 aa2.53□□□□□ -2
CIC1YHR052W MTM1P53320 366 aa2.53□□□□□ -2
CIC1YHR052W CWC25P53854 179 aaKnown RBP2.53□□□□□ -2
CIC1YHR052W TIM10P87108 93 aa2.53□□□□□ -2
CIC1YHR052W HAL1Q01766 294 aa2.53□□□□□ -2
CIC1YHR052W PEX25Q02969 394 aa2.53□□□□□ -2
CIC1YHR052W HIS4P00815 799 aaKnown RBP2.52□□□□□ -2.01
CIC1YHR052W SPS4P09937 338 aa2.52□□□□□ -2.01
CIC1YHR052W GFD2P25370 566 aaKnown RBP2.52□□□□□ -2.01
CIC1YHR052W IDH2P28241 369 aaKnown RBP2.52□□□□□ -2.01
CIC1YHR052W IMP2'P32351 346 aa2.52□□□□□ -2.01
CIC1YHR052W PMT1P33775 817 aa2.52□□□□□ -2.01
CIC1YHR052W UTH1P36135 365 aa2.52□□□□□ -2.01
CIC1YHR052W VID24P38263 362 aa2.52□□□□□ -2.01
CIC1YHR052W ECM27P47144 725 aa2.52□□□□□ -2.01
CIC1YHR052W YNR048WP53740 393 aa2.52□□□□□ -2.01
CIC1YHR052W JJJ1P53863 590 aa2.52□□□□□ -2.01
CIC1YHR052W RPT6Q01939 405 aaKnown RBP2.52□□□□□ -2.01
CIC1YHR052W YDR387CQ04162 555 aa2.52□□□□□ -2.01
CIC1YHR052W HSP31Q04432 237 aa2.52□□□□□ -2.01
CIC1YHR052W SNX3Q08826 162 aaKnown RBP2.52□□□□□ -2.01
CIC1YHR052W SLY1P22213 666 aa2.51□□□□□ -2.01
CIC1YHR052W GPI10P30777 616 aa2.51□□□□□ -2.01
CIC1YHR052W VTC2P43585 828 aa2.51□□□□□ -2.01
CIC1YHR052W FRE4P53746 719 aa2.51□□□□□ -2.01
CIC1YHR052W MDG1P53885 366 aa2.51□□□□□ -2.01
CIC1YHR052W SYF1Q04048 859 aaPredicted RBP2.51□□□□□ -2.01
CIC1YHR052W RQC1Q05468 723 aaKnown RBP2.51□□□□□ -2.01
CIC1YHR052W SGT1Q08446 395 aa2.51□□□□□ -2.01
CIC1YHR052W RTP1Q12751 981 aa2.51□□□□□ -2.01
CIC1YHR052W CYC3P06182 269 aa2.5□□□□□ -2.01
CIC1YHR052W RPI1P23250 407 aaKnown RBP2.5□□□□□ -2.01
CIC1YHR052W POP5P28005 173 aa2.5□□□□□ -2.01
CIC1YHR052W KAR9P32526 644 aa2.5□□□□□ -2.01
CIC1YHR052W KKQ8P36004 724 aa2.5□□□□□ -2.01
CIC1YHR052W MRP21P38175 177 aa2.5□□□□□ -2.01
CIC1YHR052W GIR2Q03768 265 aaPredicted RBP2.5□□□□□ -2.01
CIC1YHR052W YDL012CQ12489 107 aa2.5□□□□□ -2.01
CIC1YHR052W TEF1P02994 458 aaKnown RBP2.49□□□□□ -2.01
CIC1YHR052W ARG4P04076 463 aaPredicted RBP2.49□□□□□ -2.01
CIC1YHR052W TOP1P04786 769 aa2.49□□□□□ -2.01
CIC1YHR052W ARG3P05150 338 aa2.49□□□□□ -2.01
CIC1YHR052W RIP1P08067 215 aa2.49□□□□□ -2.01
CIC1YHR052W SEC63P14906 663 aa2.49□□□□□ -2.01
CIC1YHR052W MUD1P32605 298 aaKnown RBP2.49□□□□□ -2.01
CIC1YHR052W YHR054CP38780 354 aa2.49□□□□□ -2.01
CIC1YHR052W SSU1P41930 458 aa2.49□□□□□ -2.01
CIC1YHR052W BRO1P48582 844 aa2.49□□□□□ -2.01
CIC1YHR052W YIF1P53845 314 aaKnown RBP2.49□□□□□ -2.01
CIC1YHR052W IRC25Q07951 179 aa2.49□□□□□ -2.01
CIC1YHR052W RIM20Q12033 661 aa2.49□□□□□ -2.01
CIC1YHR052W GPH1P06738 902 aaKnown RBP2.48□□□□□ -2.01
CIC1YHR052W HSP26P15992 214 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
CIC1YHR052W MRPL10P36520 322 aa2.48□□□□□ -2.01
CIC1YHR052W LYS1P38998 373 aaRIP-Chip data2.48□□□□□ -2.01not detected
CIC1YHR052W SAS2P40963 338 aa2.48□□□□□ -2.01
CIC1YHR052W HXT3P32466 567 aaKnown RBP2.47□□□□□ -2.01
CIC1YHR052W NUP2P32499 720 aa2.47□□□□□ -2.01
CIC1YHR052W VHC1P38329 1120 aa2.47□□□□□ -2.01
CIC1YHR052W YHR131CP38835 850 aa2.47□□□□□ -2.01
CIC1YHR052W UTP18P40362 594 aaPredicted RBP2.47□□□□□ -2.01
CIC1YHR052W GAB1P41733 394 aa2.47□□□□□ -2.01
CIC1YHR052W CUE5Q08412 411 aaKnown RBP2.47□□□□□ -2.01
CIC1YHR052W ORT1Q12375 292 aa2.47□□□□□ -2.01
CIC1YHR052W GRX6Q12438 231 aa2.47□□□□□ -2.01
CIC1YHR052W RMD5Q12508 421 aa2.47□□□□□ -2.01
CIC1YHR052W ILV5P06168 395 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms