RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A ERV2Q12284 196 aa3.14□□□□□ -1.91
EFG1YGR271C-A PSY3Q12318 242 aa3.14□□□□□ -1.91
EFG1YGR271C-A AFI1Q99222 893 aa3.14□□□□□ -1.91
EFG1YGR271C-A OM45P16547 393 aa3.13□□□□□ -1.91
EFG1YGR271C-A CLC1P17891 233 aa3.13□□□□□ -1.91
EFG1YGR271C-A YIM1P28625 365 aa3.13□□□□□ -1.91
EFG1YGR271C-A YEL045CP32616 141 aa3.13□□□□□ -1.91
EFG1YGR271C-A PPQ1P32945 549 aa3.13□□□□□ -1.91
EFG1YGR271C-A LTV1P34078 463 aa3.13□□□□□ -1.91
EFG1YGR271C-A AUR1P36107 401 aaPredicted RBP3.13□□□□□ -1.91
EFG1YGR271C-A SPT8P38915 602 aa3.13□□□□□ -1.91
EFG1YGR271C-A VPS45P38932 577 aa3.13□□□□□ -1.91
EFG1YGR271C-A MNP1P53163 194 aaPredicted RBP3.13□□□□□ -1.91
EFG1YGR271C-A WSC2P53832 503 aa3.13□□□□□ -1.91
EFG1YGR271C-A DUG3P53871 357 aa3.13□□□□□ -1.91
EFG1YGR271C-A RQC1Q05468 723 aaKnown RBP3.13□□□□□ -1.91
EFG1YGR271C-A YLR456WQ06199 204 aa3.13□□□□□ -1.91
EFG1YGR271C-A MMR1Q06324 491 aa3.13□□□□□ -1.91
EFG1YGR271C-A VPS74Q06385 345 aa3.13□□□□□ -1.91
EFG1YGR271C-A APC5Q08683 685 aa3.13□□□□□ -1.91
EFG1YGR271C-A TCO89Q08921 799 aa3.13□□□□□ -1.91
EFG1YGR271C-A ATG29Q12092 213 aa3.13□□□□□ -1.91
EFG1YGR271C-A MDY2Q12285 212 aa3.13□□□□□ -1.91
EFG1YGR271C-A SEC39Q12745 709 aa3.13□□□□□ -1.91
EFG1YGR271C-A YPT6Q99260 215 aa3.13□□□□□ -1.91
EFG1YGR271C-A ISN1Q99312 450 aa3.13□□□□□ -1.91
EFG1YGR271C-A ISY1P21374 235 aaPredicted RBP3.12□□□□□ -1.91
EFG1YGR271C-A ERV1P27882 189 aa3.12□□□□□ -1.91
EFG1YGR271C-A SUR1P33300 382 aa3.12□□□□□ -1.91
EFG1YGR271C-A PCH2P38126 564 aa3.12□□□□□ -1.91
EFG1YGR271C-A MAL33P38157 468 aa3.12□□□□□ -1.91
EFG1YGR271C-A GDT1P38301 280 aaPredicted RBP3.12□□□□□ -1.91
EFG1YGR271C-A PTH1P38876 190 aaKnown RBP3.12□□□□□ -1.91
EFG1YGR271C-A BFR1P38934 470 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
EFG1YGR271C-A OSW5P40219 148 aa3.12□□□□□ -1.91
EFG1YGR271C-A DOT5P40553 215 aa3.12□□□□□ -1.91
EFG1YGR271C-A VMA13P41807 478 aaKnown RBP3.12□□□□□ -1.91
EFG1YGR271C-A CAK1P43568 368 aaPredicted RBP3.12□□□□□ -1.91
EFG1YGR271C-A SHE4P51534 789 aa3.12□□□□□ -1.91
EFG1YGR271C-A PDR16P53860 351 aaKnown RBP3.12□□□□□ -1.91
EFG1YGR271C-A ARP5P53946 755 aa3.12□□□□□ -1.91
EFG1YGR271C-A PRO2P54885 456 aaKnown RBP3.12□□□□□ -1.91
EFG1YGR271C-A KAP120Q02932 1032 aa3.12□□□□□ -1.91
EFG1YGR271C-A CWC21Q03375 135 aaKnown RBP3.12□□□□□ -1.91
EFG1YGR271C-A YML037CQ03703 340 aa3.12□□□□□ -1.91
EFG1YGR271C-A ARX1Q03862 593 aaKnown RBP3.12□□□□□ -1.91
EFG1YGR271C-A MRD1Q06106 887 aaKnown RBP3.12□□□□□ -1.91
EFG1YGR271C-A SPH1Q06160 661 aa3.12□□□□□ -1.91
EFG1YGR271C-A DBP9Q06218 594 aaKnown RBP3.12□□□□□ -1.91
EFG1YGR271C-A PHO92Q06390 306 aa3.12□□□□□ -1.91
EFG1YGR271C-A LSP1Q12230 341 aaKnown RBP3.12□□□□□ -1.91
EFG1YGR271C-A SPE4Q12455 300 aa3.12□□□□□ -1.91
EFG1YGR271C-A MF(ALPHA)1P01149 165 aa3.11□□□□□ -1.91
EFG1YGR271C-A PEP4P07267 405 aaKnown RBP3.11□□□□□ -1.91
EFG1YGR271C-A GRR1P24814 1151 aa3.11□□□□□ -1.91
EFG1YGR271C-A IMG1P25626 169 aa3.11□□□□□ -1.91
EFG1YGR271C-A UTR4P32626 227 aa3.11□□□□□ -1.91
EFG1YGR271C-A RPL32P38061 130 aaKnown RBP3.11□□□□□ -1.91
EFG1YGR271C-A ADH5P38113 351 aaKnown RBP3.11□□□□□ -1.91
EFG1YGR271C-A MTC6P38849 526 aa3.11□□□□□ -1.91
EFG1YGR271C-A CCT6P39079 546 aa3.11□□□□□ -1.91
EFG1YGR271C-A CIN4P39110 191 aa3.11□□□□□ -1.91
EFG1YGR271C-A GCD10P41814 478 aa3.11□□□□□ -1.91
EFG1YGR271C-A AIP1P46680 615 aaKnown RBP3.11□□□□□ -1.91
EFG1YGR271C-A DLD2P46681 530 aaKnown RBP3.11□□□□□ -1.91
EFG1YGR271C-A YGR111WP53265 400 aa3.11□□□□□ -1.91
EFG1YGR271C-A YGR126WP53274 230 aa3.11□□□□□ -1.91
EFG1YGR271C-A RPA49Q01080 415 aaPredicted RBP3.11□□□□□ -1.91
EFG1YGR271C-A RRN5Q02983 363 aa3.11□□□□□ -1.91
EFG1YGR271C-A YDR239CQ03780 787 aa3.11□□□□□ -1.91
EFG1YGR271C-A SOV1Q04748 898 aa3.11□□□□□ -1.91
EFG1YGR271C-A IVY1Q04934 453 aa3.11□□□□□ -1.91
EFG1YGR271C-A DON1Q05610 365 aa3.11□□□□□ -1.91
EFG1YGR271C-A MHR1Q06630 226 aa3.11□□□□□ -1.91
EFG1YGR271C-A SAC3P46674 1301 aa3.11□□□□□ -1.91
EFG1YGR271C-A SUP35P05453 685 aaKnown RBP3.1□□□□□ -1.91
EFG1YGR271C-A RPL6BP05739 176 aaKnown RBP3.1□□□□□ -1.91
EFG1YGR271C-A RAD52P06778 471 aaKnown RBP3.1□□□□□ -1.91
EFG1YGR271C-A ARD1P07347 238 aaPredicted RBP3.1□□□□□ -1.91
EFG1YGR271C-A RPL1AP0CX43 217 aaKnown RBP3.1□□□□□ -1.91
EFG1YGR271C-A RPL1BP0CX44 217 aaKnown RBP3.1□□□□□ -1.91
EFG1YGR271C-A DBP3P20447 523 aaKnown RBP3.1□□□□□ -1.91
EFG1YGR271C-A YIH1P25637 258 aa3.1□□□□□ -1.91
EFG1YGR271C-A FUN19P28003 413 aaPredicted RBP3.1□□□□□ -1.91
EFG1YGR271C-A SSE2P32590 693 aaKnown RBP3.1□□□□□ -1.91
EFG1YGR271C-A NIP100P33420 868 aa3.1□□□□□ -1.91
EFG1YGR271C-A SRB2P34162 210 aa3.1□□□□□ -1.91
EFG1YGR271C-A SEF1P34228 1148 aa3.1□□□□□ -1.91
EFG1YGR271C-A CMC1P36064 111 aa3.1□□□□□ -1.91
EFG1YGR271C-A YSW1P38280 609 aa3.1□□□□□ -1.91
EFG1YGR271C-A WSS1P38838 269 aa3.1□□□□□ -1.91
EFG1YGR271C-A YDR089WP38966 869 aa3.1□□□□□ -1.91
EFG1YGR271C-A YGR210CP42942 411 aa3.1□□□□□ -1.91
EFG1YGR271C-A PTR3P43606 678 aa3.1□□□□□ -1.91
EFG1YGR271C-A VID30P53076 958 aa3.1□□□□□ -1.91
EFG1YGR271C-A SDT1P53078 280 aa3.1□□□□□ -1.91
EFG1YGR271C-A TWF1P53250 332 aa3.1□□□□□ -1.91
EFG1YGR271C-A RPL6AQ02326 176 aaKnown RBP3.1□□□□□ -1.91
EFG1YGR271C-A IRC15Q02733 499 aa3.1□□□□□ -1.91
EFG1YGR271C-A BUD22Q04347 519 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms