RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeast

Gene RTA1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTA1	YGR213C	ABM1	P47146	123 aa		3.99	□□□□□ -1.77
RTA1	YGR213C	YNL181W	P53878	407 aa		3.99	□□□□□ -1.77
RTA1	YGR213C	YSA1	Q01976	231 aa		3.99	□□□□□ -1.77
RTA1	YGR213C	CTL1	Q03220	320 aa	Known RBP	3.99	□□□□□ -1.77
RTA1	YGR213C	RAD30	Q04049	632 aa		3.99	□□□□□ -1.77
RTA1	YGR213C	FAR8	Q05040	523 aa		3.99	□□□□□ -1.77
RTA1	YGR213C	SPO77	Q06134	477 aa		3.99	□□□□□ -1.77
RTA1	YGR213C	ATG29	Q12092	213 aa		3.99	□□□□□ -1.77
RTA1	YGR213C	SRN2	Q99176	213 aa		3.99	□□□□□ -1.77
RTA1	YGR213C	SEY1	Q99287	776 aa		3.99	□□□□□ -1.77
RTA1	YGR213C	RPP0	P05317	312 aa	Known RBP	3.98	□□□□□ -1.77
RTA1	YGR213C	DSF1	P0CX08	502 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	YNR073C	P0CX09	502 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	RPB8	P20436	146 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	DBP3	P20447	523 aa	Known RBP	3.98	□□□□□ -1.77
RTA1	YGR213C	OSM1	P21375	501 aa	Known RBP	3.98	□□□□□ -1.77
RTA1	YGR213C	UBA1	P22515	1024 aa	Known RBP	3.98	□□□□□ -1.77
RTA1	YGR213C	RAD5	P32849	1169 aa	Predicted RBP	3.98	□□□□□ -1.77
RTA1	YGR213C	UBP11	P36026	717 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	MRPL17	P36528	281 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	YPK3	P38070	525 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	KAP104	P38217	918 aa	Known RBP	3.98	□□□□□ -1.77
RTA1	YGR213C	SMF2	P38778	549 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	PHO90	P39535	881 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	YTA12	P40341	825 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	YRB2	P40517	327 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	YIL060W	P40519	144 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	YIL001W	P40560	513 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	CIN5	P40917	295 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	UFE1	P41834	346 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	LIA1	P47120	325 aa	Known RBP	3.98	□□□□□ -1.77
RTA1	YGR213C	RPS7B	P48164	190 aa	Known RBP	3.98	□□□□□ -1.77
RTA1	YGR213C	MLC1	P53141	149 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	RPN14	P53196	417 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	GOR1	P53839	350 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	YKR005C	Q02203	525 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	SWP1	Q02795	286 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	SRL4	Q03085	281 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	YMR254C	Q04838	102 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	RTT103	Q05543	409 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	DCS1	Q06151	350 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	YLR031W	Q07978	186 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	RSA1	Q08932	381 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	VIK1	Q12045	647 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	TIP41	Q12199	356 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	VPS15	P22219	1454 aa		3.98	□□□□□ -1.77
RTA1	YGR213C	SWR1	Q05471	1514 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	ARG81	P05085	880 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	STE3	P06783	470 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	YPK2	P18961	677 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	SPE2	P21182	396 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	PRE8	P23639	250 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	LCB1	P25045	558 aa	Known RBP	3.97	□□□□□ -1.77
RTA1	YGR213C	NAM9	P27929	486 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	YBL010C	P32788	280 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	MUD2	P36084	527 aa	Known RBP	3.97	□□□□□ -1.77
RTA1	YGR213C	MET30	P39014	640 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	EDC3	P39998	551 aa	Known RBP	3.97	□□□□□ -1.77
RTA1	YGR213C	THO1	P40040	218 aa	Known RBP	3.97	□□□□□ -1.77
RTA1	YGR213C	YER186C	P40101	306 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	SLM1	P40485	686 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	UTP25	P40498	721 aa	Known RBP	3.97	□□□□□ -1.77
RTA1	YGR213C	SNL1	P40548	159 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	GPD2	P41911	440 aa	Known RBP	3.97	□□□□□ -1.77
RTA1	YGR213C	IMD4	P50094	524 aa	Known RBP	3.97	□□□□□ -1.77
RTA1	YGR213C	FMS1	P50264	508 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	STR3	P53101	465 aa	Known RBP	3.97	□□□□□ -1.77
RTA1	YGR213C	YNL234W	P53857	426 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	YNL146W	P53906	100 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	MRPS17	Q03246	237 aa	Predicted RBP	3.97	□□□□□ -1.77
RTA1	YGR213C	ABZ2	Q03266	374 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	EKI1	Q03764	534 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	EMI2	Q04409	500 aa	Known RBP	3.97	□□□□□ -1.77
RTA1	YGR213C	YLR281C	Q05863	155 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	VAC14	Q06708	880 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	NOP6	Q07623	225 aa	Known RBP	3.97	□□□□□ -1.77
RTA1	YGR213C	YDL218W	Q07629	317 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	TCO89	Q08921	799 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	YPL272C	Q08984	517 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	YOR111W	Q99210	232 aa		3.97	□□□□□ -1.77
RTA1	YGR213C	GCN3	P14741	305 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	SEC63	P14906	663 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	VMA16	P23968	213 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	CHS3	P29465	1165 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	HMX1	P32339	317 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	DBP7	P36120	742 aa	Known RBP	3.96	□□□□□ -1.78
RTA1	YGR213C	AGP2	P38090	596 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	MAL33	P38157	468 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	MRX3	P38172	270 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	TSC10	P38342	320 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	ELO1	P39540	310 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	YEL068C	P39977	110 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	YIL169C	P40442	995 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	LYS14	P40971	790 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	AIP1	P46680	615 aa	Known RBP	3.96	□□□□□ -1.78
RTA1	YGR213C	LSM1	P47017	172 aa	Known RBP	3.96	□□□□□ -1.78
RTA1	YGR213C	LOH1	P47055	219 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	TMA22	P47089	198 aa	Predicted RBP	3.96	□□□□□ -1.78
RTA1	YGR213C	DIA3	P52290	468 aa		3.96	□□□□□ -1.78
RTA1	YGR213C	TOF1	P53840	1238 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms