RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W YBR238CP38330 731 aaKnown RBP7.8□□□□□ -1.16
UFD1YGR048W DED81P38707 554 aaKnown RBP7.8□□□□□ -1.16
UFD1YGR048W LYS9P38999 446 aa7.8□□□□□ -1.16
UFD1YGR048W LCB2P40970 561 aa7.8□□□□□ -1.16
UFD1YGR048W MRPS18P42847 217 aa7.8□□□□□ -1.16
UFD1YGR048W GNA1P43577 159 aaPredicted RBP7.8□□□□□ -1.16
UFD1YGR048W TAH11P47112 604 aa7.8□□□□□ -1.16
UFD1YGR048W UPF3P48412 387 aaKnown RBP7.8□□□□□ -1.16
UFD1YGR048W DOC1P53068 250 aa7.8□□□□□ -1.16
UFD1YGR048W YGR168CP53293 376 aa7.8□□□□□ -1.16
UFD1YGR048W FOL1P53848 824 aa7.8□□□□□ -1.16
UFD1YGR048W SIW14P53965 281 aa7.8□□□□□ -1.16
UFD1YGR048W YCL001W-AP87012 153 aa7.8□□□□□ -1.16
UFD1YGR048W PEX25Q02969 394 aa7.8□□□□□ -1.16
UFD1YGR048W PRM15Q03262 622 aa7.8□□□□□ -1.16
UFD1YGR048W PPN1Q04119 674 aa7.8□□□□□ -1.16
UFD1YGR048W TRM12Q04235 462 aa7.8□□□□□ -1.16
UFD1YGR048W BCH1Q05029 724 aa7.8□□□□□ -1.16
UFD1YGR048W CDA2Q06703 312 aa7.8□□□□□ -1.16
UFD1YGR048W DIB1Q06819 143 aaPredicted RBP7.8□□□□□ -1.16
UFD1YGR048W ISA1Q07821 250 aaPredicted RBP7.8□□□□□ -1.16
UFD1YGR048W YOL159CQ08300 171 aa7.8□□□□□ -1.16
UFD1YGR048W PHM7Q12252 991 aa7.8□□□□□ -1.16
UFD1YGR048W PST2Q12335 198 aaKnown RBP7.8□□□□□ -1.16
UFD1YGR048W RIB3Q99258 208 aa7.8□□□□□ -1.16
UFD1YGR048W SAS5Q99314 248 aa7.8□□□□□ -1.16
UFD1YGR048W PHR1P05066 565 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
UFD1YGR048W YFR010W-AP0C5N0 62 aa7.79□□□□□ -1.16
UFD1YGR048W PCK1P10963 549 aa7.79□□□□□ -1.16
UFD1YGR048W FUS3P16892 353 aaKnown RBP7.79□□□□□ -1.16
UFD1YGR048W CTS1P29029 562 aa7.79□□□□□ -1.16
UFD1YGR048W RPL8BP29453 256 aaKnown RBP7.79□□□□□ -1.16
UFD1YGR048W ARO7P32178 256 aa7.79□□□□□ -1.16
UFD1YGR048W RNP1P32385 249 aa7.79□□□□□ -1.16
UFD1YGR048W CAF4P36130 643 aa7.79□□□□□ -1.16
UFD1YGR048W MRPL37P36532 105 aa7.79□□□□□ -1.16
UFD1YGR048W YBL028CP38202 106 aa7.79□□□□□ -1.16
UFD1YGR048W ATG12P38316 186 aa7.79□□□□□ -1.16
UFD1YGR048W NEM1P38757 446 aa7.79□□□□□ -1.16
UFD1YGR048W NSG1P38837 291 aa7.79□□□□□ -1.16
UFD1YGR048W YHR182WP38870 785 aa7.79□□□□□ -1.16
UFD1YGR048W MNN1P39106 762 aa7.79□□□□□ -1.16
UFD1YGR048W FMP10P40098 244 aa7.79□□□□□ -1.16
UFD1YGR048W QDR1P40475 563 aa7.79□□□□□ -1.16
UFD1YGR048W YIR035CP40579 254 aa7.79□□□□□ -1.16
UFD1YGR048W YFL040WP43562 540 aa7.79□□□□□ -1.16
UFD1YGR048W RPS7BP48164 190 aaKnown RBP7.79□□□□□ -1.16
UFD1YGR048W ERV14P53173 138 aa7.79□□□□□ -1.16
UFD1YGR048W JAC1P53193 184 aa7.79□□□□□ -1.16
UFD1YGR048W ARP4P80428 489 aa7.79□□□□□ -1.16
UFD1YGR048W NUP49Q02199 472 aa7.79□□□□□ -1.16
UFD1YGR048W ROD1Q02805 837 aa7.79□□□□□ -1.16
UFD1YGR048W MAK3Q03503 176 aa7.79□□□□□ -1.16
UFD1YGR048W THI7Q05998 598 aa7.79□□□□□ -1.16
UFD1YGR048W TPO1Q07824 586 aa7.79□□□□□ -1.16
UFD1YGR048W THI73Q07904 523 aa7.79□□□□□ -1.16
UFD1YGR048W YPL199CQ08954 240 aa7.79□□□□□ -1.16
UFD1YGR048W KEL3Q08979 651 aaPredicted RBP7.79□□□□□ -1.16
UFD1YGR048W PAA1Q12447 191 aaKnown RBP7.79□□□□□ -1.16
UFD1YGR048W ERP4Q12450 207 aa7.79□□□□□ -1.16
UFD1YGR048W PFK27Q12471 397 aaPredicted RBP7.79□□□□□ -1.16
UFD1YGR048W ATP1P07251 545 aaKnown RBP7.78□□□□□ -1.16
UFD1YGR048W INO1P11986 533 aa7.78□□□□□ -1.16
UFD1YGR048W GCY1P14065 312 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
UFD1YGR048W ACO1P19414 778 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
UFD1YGR048W RPS1BP23248 255 aaKnown RBP7.78□□□□□ -1.16
UFD1YGR048W PHO91P27514 894 aa7.78□□□□□ -1.16
UFD1YGR048W NAM9P27929 486 aa7.78□□□□□ -1.16
UFD1YGR048W GSH1P32477 678 aa7.78□□□□□ -1.16
UFD1YGR048W ORC2P32833 620 aa7.78□□□□□ -1.16
UFD1YGR048W MRPL6P32904 214 aa7.78□□□□□ -1.16
UFD1YGR048W RPS1AP33442 255 aaKnown RBP7.78□□□□□ -1.16
UFD1YGR048W SEA4P38164 1038 aa7.78□□□□□ -1.16
UFD1YGR048W YMR262WP38430 313 aa7.78□□□□□ -1.16
UFD1YGR048W QNS1P38795 714 aaKnown RBP7.78□□□□□ -1.16
UFD1YGR048W GEP4P38812 185 aa7.78□□□□□ -1.16
UFD1YGR048W FAD1P38913 306 aa7.78□□□□□ -1.16
UFD1YGR048W GAA1P39012 614 aa7.78□□□□□ -1.16
UFD1YGR048W NOP16P40007 231 aaKnown RBP7.78□□□□□ -1.16
UFD1YGR048W PSA1P41940 361 aaKnown RBP7.78□□□□□ -1.16
UFD1YGR048W PHO86P46956 311 aa7.78□□□□□ -1.16
UFD1YGR048W AZR1P50080 613 aa7.78□□□□□ -1.16
UFD1YGR048W ACS2P52910 683 aaKnown RBP7.78□□□□□ -1.16
UFD1YGR048W INN1P53901 409 aa7.78□□□□□ -1.16
UFD1YGR048W OCA2P53949 197 aa7.78□□□□□ -1.16
UFD1YGR048W ARK1P53974 638 aa7.78□□□□□ -1.16
UFD1YGR048W TIM8P57744 87 aa7.78□□□□□ -1.16
UFD1YGR048W RPA49Q01080 415 aaPredicted RBP7.78□□□□□ -1.16
UFD1YGR048W TRS130Q03660 1102 aa7.78□□□□□ -1.16
UFD1YGR048W PLM2Q04383 521 aa7.78□□□□□ -1.16
UFD1YGR048W MDM30Q05930 598 aa7.78□□□□□ -1.16
UFD1YGR048W FRE3Q08905 711 aa7.78□□□□□ -1.16
UFD1YGR048W AKR2Q12013 749 aa7.78□□□□□ -1.16
UFD1YGR048W YOR022CQ12204 715 aa7.78□□□□□ -1.16
UFD1YGR048W ISN1Q99312 450 aa7.78□□□□□ -1.16
UFD1YGR048W AI5_BETAQ9ZZX0 354 aa7.78□□□□□ -1.16
UFD1YGR048W RIM15P43565 1770 aa7.78□□□□□ -1.16
UFD1YGR048W ADE8P04161 214 aa7.77□□□□□ -1.17
UFD1YGR048W AMD2P22580 549 aa7.77□□□□□ -1.17
UFD1YGR048W PUP3P25451 205 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms