RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN12, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN12	YFR052W	DST1	P07273	309 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	COS2	P0CX12	379 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	COS3	P0CX13	379 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	SGV1	P23293	657 aa	Known RBP	4.83	□□□□□ -1.64
RPN12	YFR052W	BUB2	P26448	306 aa	Predicted RBP	4.83	□□□□□ -1.64
RPN12	YFR052W	FUN30	P31380	1131 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	NTH1	P32356	751 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	YKR078W	P36158	585 aa	Known RBP	4.83	□□□□□ -1.64
RPN12	YFR052W	YBR062C	P38239	180 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	BEM4	P39011	633 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	PIC2	P40035	300 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	SLS1	P42900	643 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	COS4	P43542	379 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	IBA57	P47158	497 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	TRM9	P49957	279 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	GTR2	P53290	341 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	YNL058C	P53947	316 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	MRS2	Q01926	470 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	RNT1	Q02555	471 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	GIP3	Q03016	1276 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	MET31	Q03081	177 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	OMS1	Q06668	471 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	GLE1	Q12315	538 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	AHA1	Q12449	350 aa	Known RBP	4.83	□□□□□ -1.64
RPN12	YFR052W	MHT1	Q12525	324 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	LAG2	Q92325	660 aa		4.83	□□□□□ -1.64
RPN12	YFR052W	PNO1	Q99216	274 aa	Known RBP	4.83	□□□□□ -1.64
RPN12	YFR052W	LAT1	P12695	482 aa	Known RBP	4.82	□□□□□ -1.64
RPN12	YFR052W	IMG1	P25626	169 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	ADE1	P27616	306 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	RPC19	P28000	142 aa	Known RBP	4.82	□□□□□ -1.64
RPN12	YFR052W	IDH2	P28241	369 aa	Known RBP	4.82	□□□□□ -1.64
RPN12	YFR052W	RPS1A	P33442	255 aa	Known RBP	4.82	□□□□□ -1.64
RPN12	YFR052W	PTC1	P35182	281 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	BMT2	P38278	337 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	MNL1	P38888	796 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	SCS2	P40075	244 aa	Known RBP	4.82	□□□□□ -1.64
RPN12	YFR052W	YER158C	P40095	573 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	MET18	P40469	1032 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	GCD10	P41814	478 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	MEP2	P41948	499 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	UBP6	P43593	499 aa	Known RBP	4.82	□□□□□ -1.64
RPN12	YFR052W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
RPN12	YFR052W	ARC1	P46672	376 aa	Known RBP	4.82	□□□□□ -1.64
RPN12	YFR052W	SLM2	P53955	656 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	MPS1	P54199	764 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	HUA2	Q12134	243 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	NOP58	Q12499	511 aa	Known RBP	4.82	□□□□□ -1.64
RPN12	YFR052W	YCL012C	Q8J0M4	134 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	IRA1	P18963	3092 aa		4.82	□□□□□ -1.64
RPN12	YFR052W	HXK2	P04807	486 aa	Known RBP	4.81	□□□□□ -1.64
RPN12	YFR052W	BCY1	P07278	416 aa	Known RBP	4.81	□□□□□ -1.64
RPN12	YFR052W	HEM13	P11353	328 aa	Known RBP	4.81	□□□□□ -1.64
RPN12	YFR052W	KAR1	P11927	433 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	CHA1	P25379	360 aa	Known RBP	4.81	□□□□□ -1.64
RPN12	YFR052W	COX13	P32799	129 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	TAF14	P35189	244 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	FTH1	P38310	465 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	HSM3	P38348	480 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	YHR210C	P38893	341 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	AXL2	P38928	823 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	APQ12	P40532	138 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	MNT3	P40549	630 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	MRPS18	P42847	217 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	ELP2	P42935	788 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	TDA10	P42938	290 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	ALR2	P43553	858 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	PTR3	P43606	678 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	BIO3	P50277	480 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	YGR045C	P53229	120 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	SED5	Q01590	340 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	TRS23	Q03784	219 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	YMR111C	Q04461	462 aa	Predicted RBP	4.81	□□□□□ -1.64
RPN12	YFR052W	YOL019W	Q08157	551 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	RRP40	Q08285	240 aa	Known RBP	4.81	□□□□□ -1.64
RPN12	YFR052W	IRC13	Q08630	104 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	ESA1	Q08649	445 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	MMT2	Q08970	484 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	ALG6	Q12001	544 aa	Known RBP	4.81	□□□□□ -1.64
RPN12	YFR052W	RUP1	Q12242	671 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	YDL177C	Q12257	170 aa		4.81	□□□□□ -1.64
RPN12	YFR052W	NOT5	Q12514	560 aa	Predicted RBP	4.81	□□□□□ -1.64
RPN12	YFR052W	PRP2	P20095	876 aa	Predicted RBP	4.8	□□□□□ -1.64
RPN12	YFR052W	PRE9	P23638	258 aa	Known RBP	4.8	□□□□□ -1.64
RPN12	YFR052W	NPP1	P25353	742 aa		4.8	□□□□□ -1.64
RPN12	YFR052W	MVD1	P32377	396 aa	Known RBP	4.8	□□□□□ -1.64
RPN12	YFR052W	PET127	P32606	800 aa		4.8	□□□□□ -1.64
RPN12	YFR052W	PET112	P33893	541 aa		4.8	□□□□□ -1.64
RPN12	YFR052W	UBS1	P38290	277 aa		4.8	□□□□□ -1.64
RPN12	YFR052W	ATG7	P38862	630 aa		4.8	□□□□□ -1.64
RPN12	YFR052W	RPS26A	P39938	119 aa	Known RBP	4.8	□□□□□ -1.64
RPN12	YFR052W	RPS26B	P39939	119 aa	Known RBP	4.8	□□□□□ -1.64
RPN12	YFR052W	YIL086C	P40503	102 aa		4.8	□□□□□ -1.64
RPN12	YFR052W	PAC11	P40960	533 aa		4.8	□□□□□ -1.64
RPN12	YFR052W	RPL10	P41805	221 aa	Known RBP	4.8	□□□□□ -1.64
RPN12	YFR052W	FMP32	P43557	207 aa		4.8	□□□□□ -1.64
RPN12	YFR052W	PMT3	P47190	753 aa		4.8	□□□□□ -1.64
RPN12	YFR052W	RNR4	P49723	345 aa	Known RBP	4.8	□□□□□ -1.64
RPN12	YFR052W	MRM2	P53123	320 aa		4.8	□□□□□ -1.64
RPN12	YFR052W	RTS3	P53289	263 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms