RNA–Protein interactions for RNA: YEL004W

YEA4, Transcript of Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter, yeast

Gene YEA4, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEA4	YEL004W	TIM18	Q08749	192 aa		3.18	□□□□□ -1.9
YEA4	YEL004W	RMD9	P53140	646 aa	Known RBP	3.17	□□□□□ -1.9
YEA4	YEL004W	ARE2	P53629	642 aa	Known RBP	3.17	□□□□□ -1.9
YEA4	YEL004W	RPS8A	P0CX39	200 aa	Known RBP	3.16	□□□□□ -1.9
YEA4	YEL004W	RPS8B	P0CX40	200 aa	Known RBP	3.16	□□□□□ -1.9
YEA4	YEL004W	GFD2	P25370	566 aa	Known RBP	3.16	□□□□□ -1.9
YEA4	YEL004W	SPB1	P25582	841 aa	Predicted RBP	3.16	□□□□□ -1.9
YEA4	YEL004W	SEC66	P33754	206 aa		3.16	□□□□□ -1.9
YEA4	YEL004W	CMC1	P36064	111 aa		3.16	□□□□□ -1.9
YEA4	YEL004W	MSG5	P38590	489 aa		3.16	□□□□□ -1.9
YEA4	YEL004W	YGR149W	P48236	432 aa		3.16	□□□□□ -1.9
YEA4	YEL004W	CWC25	P53854	179 aa	Known RBP	3.16	□□□□□ -1.9
YEA4	YEL004W	YMR181C	Q03231	154 aa		3.16	□□□□□ -1.9
YEA4	YEL004W	PPM1	Q04081	328 aa		3.16	□□□□□ -1.9
YEA4	YEL004W	YDR387C	Q04162	555 aa		3.16	□□□□□ -1.9
YEA4	YEL004W	MRD1	Q06106	887 aa	Known RBP	3.16	□□□□□ -1.9
YEA4	YEL004W	YPR022C	Q12139	1133 aa		3.16	□□□□□ -1.9
YEA4	YEL004W	IDH2	P28241	369 aa	Known RBP	3.15	□□□□□ -1.91
YEA4	YEL004W	PMT1	P33775	817 aa		3.15	□□□□□ -1.91
YEA4	YEL004W	UTH1	P36135	365 aa		3.15	□□□□□ -1.91
YEA4	YEL004W	TFG2	P41896	400 aa	Predicted RBP	3.15	□□□□□ -1.91
YEA4	YEL004W	MTM1	P53320	366 aa		3.15	□□□□□ -1.91
YEA4	YEL004W	HAL1	Q01766	294 aa		3.15	□□□□□ -1.91
YEA4	YEL004W	RPT6	Q01939	405 aa	Known RBP	3.15	□□□□□ -1.91
YEA4	YEL004W	HSP31	Q04432	237 aa		3.15	□□□□□ -1.91
YEA4	YEL004W	BUD21	Q08492	214 aa	Predicted RBP	3.15	□□□□□ -1.91
YEA4	YEL004W	ATG29	Q12092	213 aa		3.15	□□□□□ -1.91
YEA4	YEL004W	YML133C	Q03099	1374 aa		3.14	□□□□□ -1.91
YEA4	YEL004W	YLL067C	Q07888	1374 aa		3.14	□□□□□ -1.91
YEA4	YEL004W	YLL066C	Q99208	1374 aa		3.14	□□□□□ -1.91
YEA4	YEL004W	PCL1	P24867	279 aa		3.14	□□□□□ -1.91
YEA4	YEL004W	ITR1	P30605	584 aa		3.14	□□□□□ -1.91
YEA4	YEL004W	PRP21	P32524	280 aa	Predicted RBP	3.14	□□□□□ -1.91
YEA4	YEL004W	ECM25	P32525	599 aa		3.14	□□□□□ -1.91
YEA4	YEL004W	CCT2	P39076	527 aa	Known RBP	3.14	□□□□□ -1.91
YEA4	YEL004W	ECM27	P47144	725 aa		3.14	□□□□□ -1.91
YEA4	YEL004W	TSA2	Q04120	196 aa		3.14	□□□□□ -1.91
YEA4	YEL004W	FDH1	Q08911	376 aa		3.14	□□□□□ -1.91
YEA4	YEL004W	NFT1	P0CE68	1218 aa		3.13	□□□□□ -1.91
YEA4	YEL004W	SLY1	P22213	666 aa		3.13	□□□□□ -1.91
YEA4	YEL004W	APE2	P32454	952 aa	Known RBP	3.13	□□□□□ -1.91
YEA4	YEL004W	VID24	P38263	362 aa		3.13	□□□□□ -1.91
YEA4	YEL004W	SPO22	P40511	975 aa		3.13	□□□□□ -1.91
YEA4	YEL004W	HXT14	P42833	540 aa		3.13	□□□□□ -1.91
YEA4	YEL004W	VPS72	Q03388	795 aa		3.13	□□□□□ -1.91
YEA4	YEL004W	GIR2	Q03768	265 aa	Predicted RBP	3.13	□□□□□ -1.91
YEA4	YEL004W	TRP1	P00912	224 aa		3.12	□□□□□ -1.91
YEA4	YEL004W	MET8	P15807	274 aa		3.12	□□□□□ -1.91
YEA4	YEL004W	NIP100	P33420	868 aa		3.12	□□□□□ -1.91
YEA4	YEL004W	YNR048W	P53740	393 aa		3.12	□□□□□ -1.91
YEA4	YEL004W	FRE4	P53746	719 aa		3.12	□□□□□ -1.91
YEA4	YEL004W	KTR5	P53966	522 aa	Predicted RBP	3.12	□□□□□ -1.91
YEA4	YEL004W	IMH1	Q06704	911 aa	Known RBP	3.12	□□□□□ -1.91
YEA4	YEL004W	SNX3	Q08826	162 aa	Known RBP	3.12	□□□□□ -1.91
YEA4	YEL004W	HIS4	P00815	799 aa	Known RBP	3.11	□□□□□ -1.91
YEA4	YEL004W	TEF1	P02994	458 aa	Known RBP	3.11	□□□□□ -1.91
YEA4	YEL004W	SPS4	P09937	338 aa		3.11	□□□□□ -1.91
YEA4	YEL004W	YBR137W	P38276	179 aa		3.11	□□□□□ -1.91
YEA4	YEL004W	VMA13	P41807	478 aa	Known RBP	3.11	□□□□□ -1.91
YEA4	YEL004W	YIF1	P53845	314 aa	Known RBP	3.11	□□□□□ -1.91
YEA4	YEL004W	SVL3	Q03088	825 aa	Known RBP	3.11	□□□□□ -1.91
YEA4	YEL004W	ARG4	P04076	463 aa	Predicted RBP	3.1	□□□□□ -1.91
YEA4	YEL004W	RPI1	P23250	407 aa	Known RBP	3.1	□□□□□ -1.91
YEA4	YEL004W	MUD1	P32605	298 aa	Known RBP	3.1	□□□□□ -1.91
YEA4	YEL004W	HCS1	P34243	683 aa		3.1	□□□□□ -1.91
YEA4	YEL004W	MRPL10	P36520	322 aa		3.1	□□□□□ -1.91
YEA4	YEL004W	MRP21	P38175	177 aa		3.1	□□□□□ -1.91
YEA4	YEL004W	LYS1	P38998	373 aa	RIP-Chip data	3.1	□□□□□ -1.91	not detected
YEA4	YEL004W	IRC25	Q07951	179 aa		3.1	□□□□□ -1.91
YEA4	YEL004W	RIM20	Q12033	661 aa		3.1	□□□□□ -1.91
YEA4	YEL004W	YLR278C	Q05854	1341 aa		3.1	□□□□□ -1.91
YEA4	YEL004W	GPH1	P06738	902 aa	Known RBP	3.09	□□□□□ -1.91
YEA4	YEL004W	IMP2'	P32351	346 aa		3.09	□□□□□ -1.91
YEA4	YEL004W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
YEA4	YEL004W	MET18	P40469	1032 aa		3.09	□□□□□ -1.91
YEA4	YEL004W	VTC2	P43585	828 aa		3.09	□□□□□ -1.91
YEA4	YEL004W	BRO1	P48582	844 aa		3.09	□□□□□ -1.91
YEA4	YEL004W	RQC1	Q05468	723 aa	Known RBP	3.09	□□□□□ -1.91
YEA4	YEL004W	YDL121C	Q07541	149 aa		3.09	□□□□□ -1.91
YEA4	YEL004W	ARG3	P05150	338 aa		3.08	□□□□□ -1.92
YEA4	YEL004W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
YEA4	YEL004W	POP5	P28005	173 aa		3.08	□□□□□ -1.92
YEA4	YEL004W	GPI10	P30777	616 aa		3.08	□□□□□ -1.92
YEA4	YEL004W	KKQ8	P36004	724 aa		3.08	□□□□□ -1.92
YEA4	YEL004W	VHC1	P38329	1120 aa		3.08	□□□□□ -1.92
YEA4	YEL004W	ESL1	P40456	1118 aa		3.08	□□□□□ -1.92
YEA4	YEL004W	JJJ1	P53863	590 aa		3.08	□□□□□ -1.92
YEA4	YEL004W	SGT1	Q08446	395 aa		3.08	□□□□□ -1.92
YEA4	YEL004W	CYC3	P06182	269 aa		3.07	□□□□□ -1.92
YEA4	YEL004W	SNT1	P25357	1226 aa		3.07	□□□□□ -1.92
YEA4	YEL004W	NUP2	P32499	720 aa		3.07	□□□□□ -1.92
YEA4	YEL004W	KAR9	P32526	644 aa		3.07	□□□□□ -1.92
YEA4	YEL004W	YHR054C	P38780	354 aa		3.07	□□□□□ -1.92
YEA4	YEL004W	SAS2	P40963	338 aa		3.07	□□□□□ -1.92
YEA4	YEL004W	ARF3	P40994	183 aa	RIP-Chip data	3.07	□□□□□ -1.92	not detected
YEA4	YEL004W	ORT1	Q12375	292 aa		3.07	□□□□□ -1.92
YEA4	YEL004W	RIP1	P08067	215 aa		3.06	□□□□□ -1.92
YEA4	YEL004W	PPH22	P23595	377 aa		3.06	□□□□□ -1.92
YEA4	YEL004W	MID2	P36027	376 aa		3.06	□□□□□ -1.92
YEA4	YEL004W	YHR131C	P38835	850 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms