RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	ROG1	P53118	685 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	CPR8	P53728	308 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	EKI1	Q03764	534 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	MDM30	Q05930	598 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	YLR455W	Q06188	304 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	POS5	Q06892	414 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	THI3	Q07471	609 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	AIM39	Q08223	395 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	THP1	Q08231	455 aa		5.06	□□□□□ -1.6
LCB2	YDR062W	NCE102	Q12207	173 aa	RIP-Chip data	5.06	□□□□□ -1.6	not detected
LCB2	YDR062W	PDR5	P33302	1511 aa	Known RBP	5.06	□□□□□ -1.6
LCB2	YDR062W	ADE5,7	P07244	802 aa	Known RBP	5.05	□□□□□ -1.6
LCB2	YDR062W	SAM1	P10659	382 aa	Known RBP	5.05	□□□□□ -1.6
LCB2	YDR062W	SAG1	P20840	650 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	TKL1	P23254	680 aa	Known RBP	5.05	□□□□□ -1.6
LCB2	YDR062W	CNA1	P23287	553 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	RHB1	P25378	209 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	SAC1	P32368	623 aa	Known RBP	5.05	□□□□□ -1.6
LCB2	YDR062W	DEF1	P35732	738 aa	Known RBP	5.05	□□□□□ -1.6
LCB2	YDR062W	EFM2	P38347	419 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	PCL5	P38794	229 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	KEL1	P38853	1164 aa	Known RBP	5.05	□□□□□ -1.6
LCB2	YDR062W	MNL1	P38888	796 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	BDH2	P39713	417 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	TDA10	P42938	290 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	LOC1	P43586	204 aa	Predicted RBP	5.05	□□□□□ -1.6
LCB2	YDR062W	YGL117W	P53133	265 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	YTP1	P53584	459 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	KTR5	P53966	522 aa	Predicted RBP	5.05	□□□□□ -1.6
LCB2	YDR062W	CDA2	Q06703	312 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	YLR049C	Q12110	428 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	COX3	P00420	269 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	COY1	P34237	679 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	MIA40	P36046	403 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	YMC2	P38087	329 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	SUL1	P38359	859 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	SMA1	Q02651	245 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	YLR297W	Q05899	129 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	RUD3	Q12234	484 aa	Known RBP	5.05	□□□□□ -1.6
LCB2	YDR062W	RRD2	Q12461	358 aa		5.05	□□□□□ -1.6
LCB2	YDR062W	SCEI	P03882	235 aa		5.04	□□□□□ -1.6
LCB2	YDR062W	RPL7A	P05737	244 aa	Known RBP	5.04	□□□□□ -1.6
LCB2	YDR062W	ERG11	P10614	530 aa		5.04	□□□□□ -1.6
LCB2	YDR062W	ATP10	P18496	279 aa		5.04	□□□□□ -1.6
LCB2	YDR062W	CLB2	P24869	491 aa		5.04	□□□□□ -1.6
LCB2	YDR062W	YBR139W	P38109	508 aa		5.04	□□□□□ -1.6
LCB2	YDR062W	TIF5	P38431	405 aa	Known RBP	5.04	□□□□□ -1.6
LCB2	YDR062W	TOM71	P38825	639 aa	Known RBP	5.04	□□□□□ -1.6
LCB2	YDR062W	CDC1	P40986	491 aa		5.04	□□□□□ -1.6
LCB2	YDR062W	PIB2	P53191	635 aa		5.04	□□□□□ -1.6
LCB2	YDR062W	SMA2	Q04658	369 aa		5.04	□□□□□ -1.6
LCB2	YDR062W	IPK1	Q06667	281 aa		5.04	□□□□□ -1.6
LCB2	YDR062W	RPL7B	Q12213	244 aa	Known RBP	5.04	□□□□□ -1.6
LCB2	YDR062W	BRR1	Q99177	341 aa	Predicted RBP	5.04	□□□□□ -1.6
LCB2	YDR062W	GAS1	P22146	559 aa	Known RBP	5.03	□□□□□ -1.6
LCB2	YDR062W	ECM25	P32525	599 aa		5.03	□□□□□ -1.6
LCB2	YDR062W	GPI16	P38875	610 aa		5.03	□□□□□ -1.6
LCB2	YDR062W	STN1	P38960	494 aa		5.03	□□□□□ -1.6
LCB2	YDR062W	TFG2	P41896	400 aa	Predicted RBP	5.03	□□□□□ -1.6
LCB2	YDR062W	SNG1	P46950	547 aa		5.03	□□□□□ -1.6
LCB2	YDR062W	PHO23	P50947	330 aa		5.03	□□□□□ -1.6
LCB2	YDR062W	PYK2	P52489	506 aa	Known RBP	5.03	□□□□□ -1.6
LCB2	YDR062W	ARV1	Q06541	321 aa		5.03	□□□□□ -1.6
LCB2	YDR062W	MCP2	Q06567	569 aa		5.03	□□□□□ -1.6
LCB2	YDR062W	ULA1	Q12059	462 aa		5.03	□□□□□ -1.6
LCB2	YDR062W	SAC3	P46674	1301 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	ADE4	P04046	510 aa	Known RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	SEC63	P14906	663 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	PMA2	P19657	947 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	NTG1	P31378	399 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	HSP104	P31539	908 aa	Known RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	PTK1	P36002	662 aa	Predicted RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	DUG2	P38149	878 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	BNA4	P38169	460 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	RRN10	P38204	145 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	TCM62	P38228	572 aa	Known RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	RFC3	P38629	340 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	ARP1	P38696	384 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	CTM1	P38818	585 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	AIM20	P40451	204 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	LYS20	P48570	428 aa	Known RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	BRO1	P48582	844 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	PNC1	P53184	216 aa	Known RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	DUG3	P53871	357 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	APM1	Q00776	475 aa	Predicted RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	STE23	Q06010	1027 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	ATG26	Q06321	1198 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	SEC3	P33332	1336 aa	Known RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	STE2	D6VTK4	431 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	TDH1	P00360	332 aa	Known RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	RNR2	P09938	399 aa	Known RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	GAL3	P13045	520 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	HNM1	P19807	563 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	YKL023W	P36103	277 aa	Known RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	KAP104	P38217	918 aa	Known RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	ZPR1	P53303	486 aa	Known RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	LSC1	P53598	329 aa	Known RBP	5.02	□□□□□ -1.61
LCB2	YDR062W	YOL073C	Q08232	322 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	YOR365C	Q08844	703 aa		5.02	□□□□□ -1.61
LCB2	YDR062W	SUT2	Q12286	268 aa		5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms