RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	PRM1	P53835	661 aa		5.08	□□□□□ -1.6
DBF4	YDR052C	ERV25	P54837	211 aa	Known RBP	5.08	□□□□□ -1.6
DBF4	YDR052C	PEX13	P80667	386 aa		5.08	□□□□□ -1.6
DBF4	YDR052C	SEN54	Q02825	467 aa	Predicted RBP	5.08	□□□□□ -1.6
DBF4	YDR052C	PEX25	Q02969	394 aa		5.08	□□□□□ -1.6
DBF4	YDR052C	YMR265C	Q03508	461 aa	Known RBP	5.08	□□□□□ -1.6
DBF4	YDR052C	CST9	Q06032	482 aa		5.08	□□□□□ -1.6
DBF4	YDR052C	MED1	Q12321	566 aa		5.08	□□□□□ -1.6
DBF4	YDR052C	ATP1	P07251	545 aa	Known RBP	5.07	□□□□□ -1.6
DBF4	YDR052C	IMA3	P0CW40	589 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	IMA4	P0CW41	589 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	FUS3	P16892	353 aa	Known RBP	5.07	□□□□□ -1.6
DBF4	YDR052C	SEC62	P21825	274 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	YDJ1	P25491	409 aa	Known RBP	5.07	□□□□□ -1.6
DBF4	YDR052C	ISC10	P32645	267 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	PGM1	P33401	570 aa	Known RBP	5.07	□□□□□ -1.6
DBF4	YDR052C	ECT1	P33412	323 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	HIS7	P33734	552 aa	Known RBP	5.07	□□□□□ -1.6
DBF4	YDR052C	ZRT3	P34240	503 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	YNK1	P36010	153 aa	Known RBP	5.07	□□□□□ -1.6
DBF4	YDR052C	FUI1	P38196	639 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	APM2	P38700	605 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	LAG1	P38703	411 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	THI6	P41835	540 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	HXT14	P42833	540 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	IMA1	P53051	589 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	SWC4	P53201	476 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	ART5	P53244	586 aa	Known RBP	5.07	□□□□□ -1.6
DBF4	YDR052C	HCH1	P53834	153 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	CWC27	Q02770	301 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	SNU56	Q03782	492 aa	Known RBP	5.07	□□□□□ -1.6
DBF4	YDR052C	TVP15	Q03860	143 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	TFC6	Q06339	672 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	IMA2	Q08295	589 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	TRE2	Q08693	809 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	ATX2	Q12067	313 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	DIN7	Q12086	430 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	GPM3	Q12326	303 aa		5.07	□□□□□ -1.6
DBF4	YDR052C	MOD5	P07884	428 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	GCD1	P09032	578 aa	Predicted RBP	5.06	□□□□□ -1.6
DBF4	YDR052C	TRX1	P22217	103 aa	Known RBP	5.06	□□□□□ -1.6
DBF4	YDR052C	CDC20	P26309	610 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	SRB2	P34162	210 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	SLI15	P38283	698 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	COS8	P38723	381 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	ARN2	P38724	620 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	AVT2	P39981	480 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	PKP1	P40530	394 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	YFL040W	P43562	540 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	SNN1	P48232	102 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	TAF4	P50105	388 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	RTA1	P53047	317 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	COS12	P53053	380 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	TIM13	P53299	105 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	GRX5	Q02784	150 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	YPL107W	Q02873	248 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	ATG16	Q03818	150 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	GAD1	Q04792	585 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	MDM30	Q05930	598 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	ATG20	Q07528	640 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	CDC28	P00546	298 aa	Known RBP	5.06	□□□□□ -1.6
DBF4	YDR052C	SPE1	P08432	466 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	CIT2	P08679	460 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	MIP1	P15801	1254 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	TRX2	P22803	104 aa	Known RBP	5.06	□□□□□ -1.6
DBF4	YDR052C	DBP1	P24784	617 aa	Known RBP	5.06	□□□□□ -1.6
DBF4	YDR052C	RNA15	P25299	296 aa	Predicted RBP	5.06	□□□□□ -1.6
DBF4	YDR052C	CPR4	P25334	318 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	YCL049C	P25577	312 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	RIM2	P38127	377 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
DBF4	YDR052C	NCL1	P38205	684 aa	Known RBP	5.06	□□□□□ -1.6
DBF4	YDR052C	ECM8	P38246	354 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	UBA4	P38820	440 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	SPL2	P38839	148 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	POP2	P39008	433 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	RSP5	P39940	809 aa	Known RBP	5.06	□□□□□ -1.6
DBF4	YDR052C	RPN3	P40016	523 aa	Known RBP	5.06	□□□□□ -1.6
DBF4	YDR052C	FAU1	P40099	211 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	TOK1	P40310	691 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	ICE2	P40499	491 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	ARC1	P46672	376 aa	Known RBP	5.06	□□□□□ -1.6
DBF4	YDR052C	CLD1	P53264	445 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	TIM44	Q01852	431 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	RTN1	Q04947	295 aa	Known RBP	5.06	□□□□□ -1.6
DBF4	YDR052C	YLR283W	Q05867	314 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	BOP2	Q06150	570 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	ECM7	Q06200	448 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	RAD34	Q06665	692 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	MRL1	Q06815	381 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	FMP25	Q08023	583 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	PPM2	Q08282	695 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	RTK1	Q12100	620 aa	Predicted RBP	5.06	□□□□□ -1.6
DBF4	YDR052C	YOR022C	Q12204	715 aa		5.06	□□□□□ -1.6
DBF4	YDR052C	CET1	O13297	549 aa	Predicted RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	ARG80	P07249	177 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	RPC40	P07703	335 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	RPS1B	P23248	255 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	BIO2	P32451	375 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	RIP-Chip

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms