RNA–Protein interactions for RNA: YBR295W

PCA1, Transcript of Cadmium transporting P-type ATPase, yeast

Gene PCA1, Length 3,651 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCA1	YBR295W	YPT32	P51996	222 aa	Known RBP	4.54	□□□□□ -1.68
PCA1	YBR295W	PKH3	Q03306	898 aa	Predicted RBP	4.54	□□□□□ -1.68
PCA1	YBR295W	TFC6	Q06339	672 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	YPL257W	Q08974	193 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	TY1A-DR3	Q12441	440 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	ATP2	P00830	511 aa	Known RBP	4.54	□□□□□ -1.68
PCA1	YBR295W	HTB1	P02293	131 aa	Known RBP	4.54	□□□□□ -1.68
PCA1	YBR295W	HTB2	P02294	131 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	GID7	P25569	745 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	LAC1	P28496	418 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	DUG2	P38149	878 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	YBR032W	P38223	100 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	ECM2	P38241	364 aa	Known RBP	4.54	□□□□□ -1.68
PCA1	YBR295W	SHE3	P38272	425 aa	Known RBP	4.54	□□□□□ -1.68
PCA1	YBR295W	YBR137W	P38276	179 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	CEM1	P39525	442 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	IRC7	P43623	340 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	ALY2	P47029	1046 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	DOC1	P53068	250 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	GPI1	P53306	609 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	ARE2	P53629	642 aa	Known RBP	4.54	□□□□□ -1.68
PCA1	YBR295W	SSK1	Q07084	712 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	HRD1	Q08109	551 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	NGL1	Q08213	363 aa	Known RBP	4.54	□□□□□ -1.68
PCA1	YBR295W	RTK1	Q12100	620 aa	Predicted RBP	4.54	□□□□□ -1.68
PCA1	YBR295W	MTR10	Q99189	972 aa		4.54	□□□□□ -1.68
PCA1	YBR295W	YLR358C	O13565	187 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	MCM10	P32354	571 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	LST4	P34239	828 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	YBR220C	P38318	560 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	YBR285W	P38354	144 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	YEL025C	P39991	1188 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	MRK1	P50873	501 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	YGL039W	P53183	348 aa	Known RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	RRN9	P53437	365 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	BRE5	P53741	515 aa	Known RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	PEX13	P80667	386 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	STP1	Q00947	519 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	DIG1	Q03063	452 aa	Known RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	COQ9	Q05779	260 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	NEJ1	Q06148	342 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	YOR342C	Q12182	319 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	RBD2	Q12270	262 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	PRM4	Q12498	284 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	YBL029C-A	Q3E756	94 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	NUP188	P52593	1655 aa	Known RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	CDC7	P06243	507 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	PPR1	P07272	904 aa	Predicted RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	TRP4	P07285	380 aa	Predicted RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	SNF4	P12904	322 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	CBS2	P14905	389 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	SEC18	P18759	758 aa	Known RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	ERG9	P29704	444 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	RPS1A	P33442	255 aa	Known RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
PCA1	YBR295W	MRPL3	P36516	390 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	MIP6	P38760	659 aa	Known RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	FET4	P40988	552 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	IRC18	P47056	224 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	SSU72	P53538	206 aa	Predicted RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	HXT11	P54862	567 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	TPP1	Q03796	238 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	YOR283W	Q12040	230 aa	Known RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	HOS1	Q12214	470 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
PCA1	YBR295W	STB3	Q12427	513 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	DCP1	Q12517	231 aa	Predicted RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	YGL194C-A	Q2V2P6	80 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	IMA3	P0CW40	589 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	IMA4	P0CW41	589 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	TY1A-DR6	P0CX70	440 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	TY1A-ER1	P0CX71	440 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	TY1A-LR2	P0CX72	440 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	TY1A-PL	P0CX73	440 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	TY1A-JR1	P0CX74	440 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	TY1A-LR3	P0CX75	440 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	TY1A-ML2	P0CX76	440 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	MRPL44	P19956	98 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	PTC6	P25646	442 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	TAT2	P38967	592 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	PLB1	P39105	664 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	QDR1	P40475	563 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	CFD1	P40558	293 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	GPP1	P41277	250 aa	Known RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	SCY1	P53009	804 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	ERV14	P53173	138 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	SHY1	P53266	389 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	SIZ1	Q04195	904 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	MFB1	Q04922	465 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	PSR2	Q07949	397 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	IMA2	Q08295	589 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	ATX2	Q12067	313 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	TY1A-GR1	Q12085	440 aa		4.53	□□□□□ -1.68
PCA1	YBR295W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	TY1A-OL	Q92392	440 aa	Known RBP	4.53	□□□□□ -1.68
PCA1	YBR295W	CIT1	P00890	479 aa		4.52	□□□□□ -1.69
PCA1	YBR295W	HXK2	P04807	486 aa	Known RBP	4.52	□□□□□ -1.69
PCA1	YBR295W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
PCA1	YBR295W	CDC36	P06100	191 aa	Predicted RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms