RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W BNA5Q05979 453 aa5.43□□□□□ -1.54
SHM1YBR263W NBA1Q08229 501 aaKnown RBP5.43□□□□□ -1.54
SHM1YBR263W ESA1Q08649 445 aa5.43□□□□□ -1.54
SHM1YBR263W YLR111WQ12528 110 aa5.43□□□□□ -1.54
SHM1YBR263W CAR1P00812 333 aaKnown RBP5.42□□□□□ -1.54
SHM1YBR263W HXK2P04807 486 aaKnown RBP5.42□□□□□ -1.54
SHM1YBR263W COS2P0CX12 379 aa5.42□□□□□ -1.54
SHM1YBR263W COS3P0CX13 379 aa5.42□□□□□ -1.54
SHM1YBR263W FUR1P18562 216 aaKnown RBP5.42□□□□□ -1.54
SHM1YBR263W DBR1P24309 405 aaKnown RBP5.42□□□□□ -1.54
SHM1YBR263W SKN1P33336 771 aa5.42□□□□□ -1.54
SHM1YBR263W PTC1P35182 281 aa5.42□□□□□ -1.54
SHM1YBR263W BMT2P38278 337 aa5.42□□□□□ -1.54
SHM1YBR263W AXL2P38928 823 aa5.42□□□□□ -1.54
SHM1YBR263W COS4P43542 379 aa5.42□□□□□ -1.54
SHM1YBR263W ARE2P53629 642 aaKnown RBP5.42□□□□□ -1.54
SHM1YBR263W CUS2P53830 285 aaPredicted RBP5.42□□□□□ -1.54
SHM1YBR263W YNL010WP53981 241 aaKnown RBP5.42□□□□□ -1.54
SHM1YBR263W MPS1P54199 764 aa5.42□□□□□ -1.54
SHM1YBR263W REX2P54964 269 aaKnown RBP5.42□□□□□ -1.54
SHM1YBR263W FAR10Q06001 478 aa5.42□□□□□ -1.54
SHM1YBR263W YDL121CQ07541 149 aa5.42□□□□□ -1.54
SHM1YBR263W YEH2Q07950 538 aa5.42□□□□□ -1.54
SHM1YBR263W HAL9Q12180 1030 aa5.42□□□□□ -1.54
SHM1YBR263W YDR262WQ12331 272 aa5.42□□□□□ -1.54
SHM1YBR263W DST1P07273 309 aa5.41□□□□□ -1.54
SHM1YBR263W KIN2P13186 1147 aaKnown RBP5.41□□□□□ -1.54
SHM1YBR263W CMP2P14747 604 aa5.41□□□□□ -1.54
SHM1YBR263W EXO70P19658 623 aa5.41□□□□□ -1.54
SHM1YBR263W OCA4P25366 362 aa5.41□□□□□ -1.54
SHM1YBR263W RAD51P25454 400 aa5.41□□□□□ -1.54
SHM1YBR263W CWP1P28319 239 aa5.41□□□□□ -1.54
SHM1YBR263W CTS1P29029 562 aa5.41□□□□□ -1.54
SHM1YBR263W SFC1P33303 322 aa5.41□□□□□ -1.54
SHM1YBR263W SIP2P34164 415 aaKnown RBP5.41□□□□□ -1.54
SHM1YBR263W KKQ8P36004 724 aa5.41□□□□□ -1.54
SHM1YBR263W FMP46P36141 133 aaKnown RBP5.41□□□□□ -1.54
SHM1YBR263W HEK2P38199 381 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
SHM1YBR263W GDT1P38301 280 aaPredicted RBP5.41□□□□□ -1.54
SHM1YBR263W ARB1P40024 610 aaKnown RBP5.41□□□□□ -1.54
SHM1YBR263W PTR3P43606 678 aa5.41□□□□□ -1.54
SHM1YBR263W FMN1Q03778 218 aa5.41□□□□□ -1.54
SHM1YBR263W MTQ2Q03920 221 aaPredicted RBP5.41□□□□□ -1.54
SHM1YBR263W STP3Q05937 343 aa5.41□□□□□ -1.54
SHM1YBR263W ATG34Q12292 412 aa5.41□□□□□ -1.54
SHM1YBR263W LEU4P06208 619 aaKnown RBP5.4□□□□□ -1.54
SHM1YBR263W RPS21AP0C0V8 87 aaKnown RBP5.4□□□□□ -1.54
SHM1YBR263W LAT1P12695 482 aaKnown RBP5.4□□□□□ -1.54
SHM1YBR263W SGV1P23293 657 aaKnown RBP5.4□□□□□ -1.54
SHM1YBR263W GFD2P25370 566 aaKnown RBP5.4□□□□□ -1.54
SHM1YBR263W TRX3P25372 127 aa5.4□□□□□ -1.54
SHM1YBR263W MLS1P30952 554 aa5.4□□□□□ -1.54
SHM1YBR263W STE14P32584 239 aa5.4□□□□□ -1.54
SHM1YBR263W BAP2P38084 609 aa5.4□□□□□ -1.54
SHM1YBR263W YBR071WP38243 211 aa5.4□□□□□ -1.54
SHM1YBR263W RFC3P38629 340 aa5.4□□□□□ -1.54
SHM1YBR263W ARN1P38731 627 aa5.4□□□□□ -1.54
SHM1YBR263W MET30P39014 640 aa5.4□□□□□ -1.54
SHM1YBR263W YEN1P40028 759 aa5.4□□□□□ -1.54
SHM1YBR263W VRG4P40107 337 aa5.4□□□□□ -1.54
SHM1YBR263W MET12P46151 657 aa5.4□□□□□ -1.54
SHM1YBR263W YJL049WP47048 450 aa5.4□□□□□ -1.54
SHM1YBR263W NAS6P50086 228 aa5.4□□□□□ -1.54
SHM1YBR263W FHN1P53279 174 aa5.4□□□□□ -1.54
SHM1YBR263W NRM1P53718 249 aa5.4□□□□□ -1.54
SHM1YBR263W GIP3Q03016 1276 aa5.4□□□□□ -1.54
SHM1YBR263W YDR124WQ04608 324 aa5.4□□□□□ -1.54
SHM1YBR263W YLR456WQ06199 204 aa5.4□□□□□ -1.54
SHM1YBR263W DIN7Q12086 430 aa5.4□□□□□ -1.54
SHM1YBR263W YOR114WQ12219 294 aa5.4□□□□□ -1.54
SHM1YBR263W YOL107WQ12239 342 aa5.4□□□□□ -1.54
SHM1YBR263W RRP12Q12754 1228 aaKnown RBP5.4□□□□□ -1.54
SHM1YBR263W YCL012CQ8J0M4 134 aa5.4□□□□□ -1.54
SHM1YBR263W BRR1Q99177 341 aaPredicted RBP5.4□□□□□ -1.54
SHM1YBR263W IRA1P18963 3092 aa5.4□□□□□ -1.54
SHM1YBR263W TYR1P20049 452 aa5.39□□□□□ -1.55
SHM1YBR263W PRP4P20053 465 aaKnown RBP5.39□□□□□ -1.55
SHM1YBR263W RAD14P28519 371 aa5.39□□□□□ -1.55
SHM1YBR263W FRE2P36033 711 aa5.39□□□□□ -1.55
SHM1YBR263W SPC42P36094 363 aa5.39□□□□□ -1.55
SHM1YBR263W CAF4P36130 643 aa5.39□□□□□ -1.55
SHM1YBR263W YKR078WP36158 585 aaKnown RBP5.39□□□□□ -1.55
SHM1YBR263W CBP4P37267 147 aa5.39□□□□□ -1.55
SHM1YBR263W YBL029WP38201 376 aa5.39□□□□□ -1.55
SHM1YBR263W RRN10P38204 145 aa5.39□□□□□ -1.55
SHM1YBR263W OCA5P38738 679 aa5.39□□□□□ -1.55
SHM1YBR263W CAB2P40506 365 aa5.39□□□□□ -1.55
SHM1YBR263W APQ12P40532 138 aa5.39□□□□□ -1.55
SHM1YBR263W MNT3P40549 630 aa5.39□□□□□ -1.55
SHM1YBR263W CFD1P40558 293 aa5.39□□□□□ -1.55
SHM1YBR263W MEP2P41948 499 aa5.39□□□□□ -1.55
SHM1YBR263W DUG1P43616 481 aaKnown RBP5.39□□□□□ -1.55
SHM1YBR263W YGR053CP53234 283 aa5.39□□□□□ -1.55
SHM1YBR263W LGE1Q02796 332 aaKnown RBP5.39□□□□□ -1.55
SHM1YBR263W YET2Q04210 160 aa5.39□□□□□ -1.55
SHM1YBR263W ROY1Q04847 553 aa5.39□□□□□ -1.55
SHM1YBR263W SLF1Q12034 447 aaKnown RBP5.39□□□□□ -1.55
SHM1YBR263W YPR022CQ12139 1133 aa5.39□□□□□ -1.55
SHM1YBR263W STT4P37297 1900 aa5.39□□□□□ -1.55
SHM1YBR263W GAL7P08431 366 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms