RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	PDR8	Q06149	701 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	RRT8	Q08219	342 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	MCH4	Q08268	501 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	YOR365C	Q08844	703 aa		4.78	□□□□□ -1.64
SMP1	YBR182C	CHD1	P32657	1468 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	GPA1	P08539	472 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	GAL3	P13045	520 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	SEC63	P14906	663 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	TYR1	P20049	452 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	NUP1	P20676	1076 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	DMC1	P25453	334 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
SMP1	YBR182C	OCT1	P35999	772 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	ARP1	P38696	384 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	KEL1	P38853	1164 aa	Known RBP	4.77	□□□□□ -1.65
SMP1	YBR182C	PEX18	P38855	283 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	GAT2	P40209	560 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	LAM5	P43560	674 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	TAX4	P47030	604 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	STB4	P50104	949 aa		4.77	□□□□□ -1.65
SMP1	YBR182C	RAD52	P06778	471 aa	Known RBP	4.76	□□□□□ -1.65
SMP1	YBR182C	NFT1	P0CE68	1218 aa		4.76	□□□□□ -1.65
SMP1	YBR182C	MAK32	P23060	363 aa		4.76	□□□□□ -1.65
SMP1	YBR182C	FUN19	P28003	413 aa	Predicted RBP	4.76	□□□□□ -1.65
SMP1	YBR182C	COY1	P34237	679 aa		4.76	□□□□□ -1.65
SMP1	YBR182C	SOR1	P35497	357 aa	Known RBP	4.76	□□□□□ -1.65
SMP1	YBR182C	GPI16	P38875	610 aa		4.76	□□□□□ -1.65
SMP1	YBR182C	PAC11	P40960	533 aa		4.76	□□□□□ -1.65
SMP1	YBR182C	YJL043W	P47053	257 aa		4.76	□□□□□ -1.65
SMP1	YBR182C	LIA1	P47120	325 aa	Known RBP	4.76	□□□□□ -1.65
SMP1	YBR182C	EMC2	P47133	292 aa	Known RBP	4.76	□□□□□ -1.65
SMP1	YBR182C	YGL114W	P53134	725 aa		4.76	□□□□□ -1.65
SMP1	YBR182C	PNC1	P53184	216 aa	Known RBP	4.76	□□□□□ -1.65
SMP1	YBR182C	YMR310C	Q04867	317 aa	Predicted RBP	4.76	□□□□□ -1.65
SMP1	YBR182C	MCP2	Q06567	569 aa		4.76	□□□□□ -1.65
SMP1	YBR182C	SOR2	Q07786	357 aa		4.76	□□□□□ -1.65
SMP1	YBR182C	ULA1	Q12059	462 aa		4.76	□□□□□ -1.65
SMP1	YBR182C	QCR6	P00127	147 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	CDC21	P06785	304 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	CDC43	P18898	376 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	RPB8	P20436	146 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	KIN3	P22209	435 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	SAT4	P25333	603 aa	Known RBP	4.75	□□□□□ -1.65
SMP1	YBR182C	GID7	P25569	745 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	PSO2	P30620	661 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	NTG1	P31378	399 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	ATP11	P32453	318 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	YSC83	P32792	385 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	PTK1	P36002	662 aa	Predicted RBP	4.75	□□□□□ -1.65
SMP1	YBR182C	MRPL37	P36532	105 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	YBR139W	P38109	508 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	LAG1	P38703	411 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	BZZ1	P38822	633 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	ERV46	P39727	415 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	AIM20	P40451	204 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	SAS2	P40963	338 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	PHO86	P46956	311 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	LSC1	P53598	329 aa	Known RBP	4.75	□□□□□ -1.65
SMP1	YBR182C	MPP6	P53725	186 aa	Predicted RBP	4.75	□□□□□ -1.65
SMP1	YBR182C	DSL1	P53847	754 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	YNL146W	P53906	100 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	ASI1	P54074	624 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	PIG1	Q06216	648 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	YPR078C	Q06813	372 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	PEX27	Q08580	376 aa		4.75	□□□□□ -1.65
SMP1	YBR182C	YPR089W	O13585	888 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	MAS1	P10507	462 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	UGA1	P17649	471 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	HMX1	P32339	317 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	CYS4	P32582	507 aa	Known RBP	4.74	□□□□□ -1.65
SMP1	YBR182C	STV1	P37296	890 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	QDR3	P38227	689 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	SPP381	P38282	291 aa	Predicted RBP	4.74	□□□□□ -1.65
SMP1	YBR182C	ARN1	P38731	627 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	CCT2	P39076	527 aa	Known RBP	4.74	□□□□□ -1.65
SMP1	YBR182C	YIL060W	P40519	144 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	SYG1	P40528	902 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	YJR154W	P47181	346 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	UBP8	P50102	471 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	BUD32	P53323	261 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	KTR5	P53966	522 aa	Predicted RBP	4.74	□□□□□ -1.65
SMP1	YBR182C	MUK1	Q02866	612 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	ATC1	Q04005	294 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	SWF1	Q04629	336 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	ARV1	Q06541	321 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	RDR1	Q08904	546 aa		4.74	□□□□□ -1.65
SMP1	YBR182C	TDH1	P00360	332 aa	Known RBP	4.73	□□□□□ -1.65
SMP1	YBR182C	AQY1	P0CD91	305 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	SAR1	P20606	190 aa	Known RBP	4.73	□□□□□ -1.65
SMP1	YBR182C	GSY2	P27472	705 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	MRP4	P32902	394 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	SWC5	P38326	303 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	INM1	P38710	295 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	RRP4	P38792	359 aa	Known RBP	4.73	□□□□□ -1.65
SMP1	YBR182C	CTM1	P38818	585 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	YPS6	P40583	537 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	IAH1	P41734	238 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	GTO1	P48239	356 aa		4.73	□□□□□ -1.65
SMP1	YBR182C	IMD3	P50095	523 aa	Known RBP	4.73	□□□□□ -1.65
SMP1	YBR182C	DRN1	P53255	507 aa	Known RBP	4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms