RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 FOXD4L3Q6VB84 417 aaPredicted RBP13.96□□□□□ -0.17
LINC00339-213ENST00000642137 SEPT14Q6ZU15 432 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 TRIB2Q92519 343 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 LENG9Q96B70 501 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 FAM20AQ96MK3 541 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 MTMR9Q96QG7 549 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 KATNBL1Q9H079 304 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 KCNH7Q9NS40 1196 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 RCOR1Q9UKL0 485 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 CNPY2Q9Y2B0 182 aa13.96□□□□□ -0.17
LINC00339-213ENST00000642137 DDX49Q9Y6V7 483 aaKnown RBP13.96□□□□□ -0.17
LINC00339-213ENST00000642137 MSH4O15457 936 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 SLC37A4O43826 429 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 NEMFO60524 1076 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 YEATS4O95619 227 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 ZNF865P0CJ78 1059 aaPredicted RBP13.95□□□□□ -0.18
LINC00339-213ENST00000642137 CYP2C19P33261 490 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 ATP2C1P98194 919 aaPredicted RBP13.95□□□□□ -0.18
LINC00339-213ENST00000642137 PTGDRQ13258 359 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 MTMR1Q13613 665 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 PKN2Q16513 984 aaKnown RBP13.95□□□□□ -0.18
LINC00339-213ENST00000642137 CLEC17AQ6ZS10 378 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 EEPD1Q7L9B9 569 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 CTU1Q7Z7A3 348 aaKnown RBP13.95□□□□□ -0.18
LINC00339-213ENST00000642137 SLFN12Q8IYM2 578 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 LINC00301Q8NCQ3 95 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 SLAIN1Q8ND83 568 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 SENP7Q9BQF6 1050 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 SCAND2PQ9GZW5 306 aaPredicted RBP13.95□□□□□ -0.18
LINC00339-213ENST00000642137 KCNMB3Q9NPA1 279 aa13.95□□□□□ -0.18
LINC00339-213ENST00000642137 LRRC37A2A6NM11 1700 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 MARCH6O60337 910 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 HMGCRP04035 888 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 GRK4P32298 578 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 PRPHP41219 470 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 CEBPZQ03701 1054 aaKnown RBP13.94□□□□□ -0.18
LINC00339-213ENST00000642137 SEMA3FQ13275 785 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 TTLL4Q14679 1199 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 STK38Q15208 465 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 CALCRLQ16602 461 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 PRAMEF19Q5SWL8 479 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 ARL6IP4Q66PJ3 421 aaKnown RBP13.94□□□□□ -0.18
LINC00339-213ENST00000642137 POTEDQ86YR6 584 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 FBXO16Q8IX29 292 aaPredicted RBP13.94□□□□□ -0.18
LINC00339-213ENST00000642137 GIMAP8Q8ND71 665 aaPredicted RBP13.94□□□□□ -0.18
LINC00339-213ENST00000642137 ETNPPLQ8TBG4 499 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 SCFD2Q8WU76 684 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 HAS1Q92839 578 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 ZNF577Q9BSK1 485 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 TMEM60Q9H2L4 133 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 AGO4Q9HCK5 861 aaKnown RBP13.94□□□□□ -0.18
LINC00339-213ENST00000642137 PRDM10Q9NQV6 1147 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 PDGFCQ9NRA1 345 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 TBC1D22BQ9NU19 505 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 DDX41Q9UJV9 622 aaKnown RBP13.94□□□□□ -0.18
LINC00339-213ENST00000642137 PTCH2Q9Y6C5 1203 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 MRVI1Q9Y6F6 885 aa13.94□□□□□ -0.18
LINC00339-213ENST00000642137 IPO5O00410 1097 aaKnown RBP13.93□□□□□ -0.18
LINC00339-213ENST00000642137 SPTLC2O15270 562 aa13.93□□□□□ -0.18
LINC00339-213ENST00000642137 ATP9AO75110 1047 aa13.93□□□□□ -0.18
LINC00339-213ENST00000642137 PPP6R2O75170 966 aa13.93□□□□□ -0.18
LINC00339-213ENST00000642137 OR52Z1P0C646 297 aa13.93□□□□□ -0.18
LINC00339-213ENST00000642137 TXNP10599 105 aaKnown RBP13.93□□□□□ -0.18
LINC00339-213ENST00000642137 ELNP15502 786 aa13.93□□□□□ -0.18
LINC00339-213ENST00000642137 CACNB2Q08289 660 aaPredicted RBP13.93□□□□□ -0.18
LINC00339-213ENST00000642137 NEDD9Q14511 834 aa13.93□□□□□ -0.18
LINC00339-213ENST00000642137 CCDC62Q6P9F0 684 aa13.93□□□□□ -0.18
LINC00339-213ENST00000642137 SLC5A5Q92911 643 aa13.93□□□□□ -0.18
LINC00339-213ENST00000642137 RIT2Q99578 217 aa13.93□□□□□ -0.18
LINC00339-213ENST00000642137 FTOQ9C0B1 505 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC00339-213ENST00000642137 FAM184BQ9ULE4 1060 aa13.93□□□□□ -0.18
LINC00339-213ENST00000642137 NFASCO94856 1347 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 NKRFO15226 690 aaKnown RBP eCLIP13.92□□□□□ -0.18
LINC00339-213ENST00000642137 DHX15O43143 795 aaKnown RBP13.92□□□□□ -0.18
LINC00339-213ENST00000642137 PSMD10O75832 226 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 CYBAP13498 195 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 KCNA2P16389 499 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 NCLP19338 710 aaKnown RBP13.92□□□□□ -0.18
LINC00339-213ENST00000642137 TXKP42681 527 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 SP2Q02086 613 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 PDIA5Q14554 519 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 LY6KQ17RY6 165 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 CCDC144BQ3MJ40 725 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 DUSP28Q4G0W2 176 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 MAP3K21Q5TCX8 1036 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 DTHD1Q6ZMT9 781 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 KCNG4Q8TDN1 519 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 FERMT2Q96AC1 680 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 CHAMP1Q96JM3 812 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 SPATA32Q96LK8 384 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 ZHX1Q9UKY1 873 aaPredicted RBP13.92□□□□□ -0.18
LINC00339-213ENST00000642137 PCDHA12Q9UN75 941 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 Q9Y3F1 56 aa13.92□□□□□ -0.18
LINC00339-213ENST00000642137 SRPRBQ9Y5M8 271 aaKnown RBP13.92□□□□□ -0.18
LINC00339-213ENST00000642137 ARIH2O95376 493 aa13.91□□□□□ -0.18
LINC00339-213ENST00000642137 ADCYAP1R1P41586 468 aa13.91□□□□□ -0.18
LINC00339-213ENST00000642137 TNFAIP2Q03169 654 aa13.91□□□□□ -0.18
LINC00339-213ENST00000642137 TRIM32Q13049 653 aa13.91□□□□□ -0.18
LINC00339-213ENST00000642137 ITGB3BPQ13352 177 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-213ENST00000642137 CSPP1Q1MSJ5 1256 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms