RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 PFKFB3Q16875 520 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-231ENST00000641939 NFRKBQ6P4R8 1299 aa17.25■□□□□ 0.35
PHGDH-231ENST00000641939 GLT8D2Q9H1C3 349 aa17.25■□□□□ 0.35
PHGDH-231ENST00000641939 TRPV6Q9H1D0 765 aa17.25■□□□□ 0.35
PHGDH-231ENST00000641939 EHMT1Q9H9B1 1298 aa17.25■□□□□ 0.35
PHGDH-231ENST00000641939 PDRG1Q9NUG6 133 aa17.25■□□□□ 0.35
PHGDH-231ENST00000641939 RTEL1Q9NZ71 1219 aa17.25■□□□□ 0.35
PHGDH-231ENST00000641939 PCDHA6Q9UN73 950 aa17.25■□□□□ 0.35
PHGDH-231ENST00000641939 PCDHA8Q9Y5H6 950 aa17.25■□□□□ 0.35
PHGDH-231ENST00000641939 TRIP12Q14669 1992 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-231ENST00000641939 SMCO2A6NFE2 343 aa17.24■□□□□ 0.35
PHGDH-231ENST00000641939 SPATA31C2B4DYI2 1134 aa17.24■□□□□ 0.35
PHGDH-231ENST00000641939 PRPF3O43395 683 aaKnown RBP17.24■□□□□ 0.35
PHGDH-231ENST00000641939 FIBPO43427 364 aa17.24■□□□□ 0.35
PHGDH-231ENST00000641939 B4GALT4O60513 344 aa17.24■□□□□ 0.35
PHGDH-231ENST00000641939 SCG2P13521 617 aa17.24■□□□□ 0.35
PHGDH-231ENST00000641939 CCT2P78371 535 aaKnown RBP17.24■□□□□ 0.35
PHGDH-231ENST00000641939 FPGSQ05932 587 aa17.24■□□□□ 0.35
PHGDH-231ENST00000641939 NTRK3Q16288 839 aa17.24■□□□□ 0.35
PHGDH-231ENST00000641939 LRIT3Q3SXY7 679 aa17.24■□□□□ 0.35
PHGDH-231ENST00000641939 FAM47CQ5HY64 1035 aa17.24■□□□□ 0.35
PHGDH-231ENST00000641939 MFSD5Q6N075 450 aa17.24■□□□□ 0.35
PHGDH-231ENST00000641939 ZNF274Q96GC6 653 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-231ENST00000641939 SPATA33Q96N06 139 aa17.24■□□□□ 0.35
PHGDH-231ENST00000641939 MLXIPQ9HAP2 919 aa17.24■□□□□ 0.35
PHGDH-231ENST00000641939 SOX1O00570 391 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-231ENST00000641939 PPFIA4O75335 1185 aa17.23■□□□□ 0.35
PHGDH-231ENST00000641939 SUPT20HL2P0C7V6 817 aa17.23■□□□□ 0.35
PHGDH-231ENST00000641939 HOXD8P13378 290 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-231ENST00000641939 IFNAR1P17181 557 aa17.23■□□□□ 0.35
PHGDH-231ENST00000641939 CHMP4BP1P59074 171 aa17.23■□□□□ 0.35
PHGDH-231ENST00000641939 AKAP17AQ02040 695 aaKnown RBP17.23■□□□□ 0.35
PHGDH-231ENST00000641939 PTPN11Q06124 597 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-231ENST00000641939 SEMA3FQ13275 785 aa17.23■□□□□ 0.35
PHGDH-231ENST00000641939 NEDD9Q14511 834 aa17.23■□□□□ 0.35
PHGDH-231ENST00000641939 HSDL1Q3SXM5 330 aa17.23■□□□□ 0.35
PHGDH-231ENST00000641939 NLRX1Q86UT6 975 aa17.23■□□□□ 0.35
PHGDH-231ENST00000641939 KAT2BQ92831 832 aa17.23■□□□□ 0.35
PHGDH-231ENST00000641939 PHKBQ93100 1093 aa17.23■□□□□ 0.35
PHGDH-231ENST00000641939 PPP1R12CQ9BZL4 782 aa17.23■□□□□ 0.35
PHGDH-231ENST00000641939 TRMT13Q9NUP7 481 aaKnown RBP17.23■□□□□ 0.35
PHGDH-231ENST00000641939 SORBS3O60504 671 aa17.22■□□□□ 0.35
PHGDH-231ENST00000641939 FOSP01100 380 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-231ENST00000641939 SHHQ15465 462 aa17.22■□□□□ 0.35
PHGDH-231ENST00000641939 PKN1Q16512 942 aa17.22■□□□□ 0.35
PHGDH-231ENST00000641939 TMEM199Q8N511 208 aa17.22■□□□□ 0.35
PHGDH-231ENST00000641939 CCDC12Q8WUD4 166 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-231ENST00000641939 PPP1R13LQ8WUF5 828 aa17.22■□□□□ 0.35
PHGDH-231ENST00000641939 GPRASP2Q96D09 838 aa17.22■□□□□ 0.35
PHGDH-231ENST00000641939 CDHR1Q96JP9 859 aa17.22■□□□□ 0.35
PHGDH-231ENST00000641939 LARP6Q9BRS8 491 aaKnown RBP17.22■□□□□ 0.35
PHGDH-231ENST00000641939 KATNAL1Q9BW62 490 aa17.22■□□□□ 0.35
PHGDH-231ENST00000641939 RNF26Q9BY78 433 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-231ENST00000641939 HIPK3Q9H422 1215 aa17.22■□□□□ 0.35
PHGDH-231ENST00000641939 NCOA5Q9HCD5 579 aaKnown RBP17.22■□□□□ 0.35
PHGDH-231ENST00000641939 KAT6AQ92794 2004 aa17.21■□□□□ 0.35
PHGDH-231ENST00000641939 ESYT2A0FGR8 921 aa17.21■□□□□ 0.35
PHGDH-231ENST00000641939 ZNF286BP0CG31 522 aa17.21■□□□□ 0.35
PHGDH-231ENST00000641939 CYP2C18P33260 490 aa17.21■□□□□ 0.35
PHGDH-231ENST00000641939 CLK2P49760 499 aaKnown RBP17.21■□□□□ 0.35
PHGDH-231ENST00000641939 AP3B2Q13367 1082 aa17.21■□□□□ 0.35
PHGDH-231ENST00000641939 PPIGQ13427 754 aaKnown RBP eCLIP17.21■□□□□ 0.353e-6■□□□□ 9.8
PHGDH-231ENST00000641939 C9orf50Q5SZB4 431 aa17.21■□□□□ 0.35
PHGDH-231ENST00000641939 METTL7BQ6UX53 244 aa17.21■□□□□ 0.35
PHGDH-231ENST00000641939 CYFIP1Q7L576 1253 aa17.21■□□□□ 0.35
PHGDH-231ENST00000641939 LRCH3Q96II8 777 aa17.21■□□□□ 0.35
PHGDH-231ENST00000641939 SENP7Q9BQF6 1050 aa17.21■□□□□ 0.35
PHGDH-231ENST00000641939 NOC4LQ9BVI4 516 aaKnown RBP17.21■□□□□ 0.35
PHGDH-231ENST00000641939 SLC26A6Q9BXS9 759 aa17.21■□□□□ 0.35
PHGDH-231ENST00000641939 BCAS3Q9H6U6 928 aa17.21■□□□□ 0.35
PHGDH-231ENST00000641939 UBIAD1Q9Y5Z9 338 aa17.21■□□□□ 0.35
PHGDH-231ENST00000641939 NOP56O00567 594 aaKnown RBP17.2■□□□□ 0.34
PHGDH-231ENST00000641939 PPFIA3O75145 1194 aa17.2■□□□□ 0.34
PHGDH-231ENST00000641939 F2P00734 622 aa17.2■□□□□ 0.34
PHGDH-231ENST00000641939 ITGB5P18084 799 aa17.2■□□□□ 0.34
PHGDH-231ENST00000641939 PSEN2P49810 448 aa17.2■□□□□ 0.34
PHGDH-231ENST00000641939 EPHB4P54760 987 aa17.2■□□□□ 0.34
PHGDH-231ENST00000641939 MFSD10Q14728 455 aa17.2■□□□□ 0.34
PHGDH-231ENST00000641939 SESTD1Q86VW0 696 aa17.2■□□□□ 0.34
PHGDH-231ENST00000641939 GIMAP8Q8ND71 665 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-231ENST00000641939 IL17RAQ96F46 866 aa17.2■□□□□ 0.34
PHGDH-231ENST00000641939 PGBD1Q96JS3 809 aa17.2■□□□□ 0.34
PHGDH-231ENST00000641939 ANO3Q9BYT9 981 aa17.2■□□□□ 0.34
PHGDH-231ENST00000641939 ZMYND12Q9H0C1 365 aa17.2■□□□□ 0.34
PHGDH-231ENST00000641939 C6orf50Q9HD87 102 aa17.2■□□□□ 0.34
PHGDH-231ENST00000641939 HAS3O00219 553 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 CPLX1O14810 134 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 MAFGO15525 162 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 SEC24BO95487 1268 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 CYP2C9P11712 490 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 CSF2RAP15509 400 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 SSRP1Q08945 709 aaKnown RBP17.19■□□□□ 0.34
PHGDH-231ENST00000641939 STK3Q13188 491 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 MTMR1Q13613 665 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 KIAA0753Q2KHM9 967 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 TRIM22Q8IYM9 498 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 C7orf31Q8N865 590 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 ALG1Q9BT22 464 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 JADE2Q9NQC1 790 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 TMEM260Q9NX78 707 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 346.2 ms