RNA–Protein interactions for RNA: ENST00000641418.1

CASC19-229, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,373 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-229ENST00000641418 SOX1O00570 391 aaPredicted RBP12.51□□□□□ -0.41
CASC19-229ENST00000641418 PPFIA3O75145 1194 aa12.51□□□□□ -0.41
CASC19-229ENST00000641418 FCER1AP12319 257 aa12.51□□□□□ -0.41
CASC19-229ENST00000641418 GNAT2P19087 354 aa12.51□□□□□ -0.41
CASC19-229ENST00000641418 LRRFIP1Q32MZ4 808 aaKnown RBP12.51□□□□□ -0.41
CASC19-229ENST00000641418 SAMD5Q5TGI4 173 aa12.51□□□□□ -0.41
CASC19-229ENST00000641418 TSHZ3Q63HK5 1081 aa12.51□□□□□ -0.41
CASC19-229ENST00000641418 LRRC69Q6ZNQ3 347 aa12.51□□□□□ -0.41
CASC19-229ENST00000641418 GZF1Q9H116 711 aaPredicted RBP12.51□□□□□ -0.41
CASC19-229ENST00000641418 ANO2Q9NQ90 1003 aa12.51□□□□□ -0.41
CASC19-229ENST00000641418 FAM13BQ9NYF5 915 aa12.51□□□□□ -0.41
CASC19-229ENST00000641418 NXF1Q9UBU9 619 aaKnown RBP12.51□□□□□ -0.41
CASC19-229ENST00000641418 PPP1R9AQ9ULJ8 1098 aa12.51□□□□□ -0.41
CASC19-229ENST00000641418 CDK5RAP2Q96SN8 1893 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 VWA5AO00534 786 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 TNFRSF10BO14763 440 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 SEPT4O43236 478 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 GPAA1O43292 621 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 STAT3P40763 770 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 FAM83BQ5T0W9 1011 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 RIOX2Q8IUF8 465 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 STK11IPQ8N1F8 1099 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 ARRDC4Q8NCT1 418 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 UBE2OQ9C0C9 1292 aaKnown RBP12.5□□□□□ -0.41
CASC19-229ENST00000641418 ZNF287Q9HBT7 754 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 NYAP2Q9P242 653 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 PLXNB2O15031 1838 aa12.5□□□□□ -0.41
CASC19-229ENST00000641418 DDX60LQ5H9U9 1706 aaKnown RBP12.49□□□□□ -0.41
CASC19-229ENST00000641418 MYH1P12882 1939 aa12.49□□□□□ -0.41
CASC19-229ENST00000641418 TTC41PQ6P2S7 1318 aa12.49□□□□□ -0.41
CASC19-229ENST00000641418 ERC2O15083 957 aa12.49□□□□□ -0.41
CASC19-229ENST00000641418 APPP05067 770 aa12.49□□□□□ -0.41
CASC19-229ENST00000641418 COPB2P35606 906 aa12.49□□□□□ -0.41
CASC19-229ENST00000641418 TDO2P48775 406 aa12.49□□□□□ -0.41
CASC19-229ENST00000641418 PRAMEF19Q5SWL8 479 aa12.49□□□□□ -0.41
CASC19-229ENST00000641418 TDHQ8IZJ6 230 aa12.49□□□□□ -0.41
CASC19-229ENST00000641418 ZNF444Q8N0Y2 327 aaPredicted RBP12.49□□□□□ -0.41
CASC19-229ENST00000641418 MAML3Q96JK9 1138 aa12.49□□□□□ -0.41
CASC19-229ENST00000641418 MMP19Q99542 508 aa12.49□□□□□ -0.41
CASC19-229ENST00000641418 NRBP1Q9UHY1 535 aa12.49□□□□□ -0.41
CASC19-229ENST00000641418 DOCK3Q8IZD9 2030 aa12.49□□□□□ -0.41
CASC19-229ENST00000641418 F5H6K3 240 aa12.48□□□□□ -0.41
CASC19-229ENST00000641418 KLRC3Q07444 240 aa12.48□□□□□ -0.41
CASC19-229ENST00000641418 KCTD2Q14681 263 aa12.48□□□□□ -0.41
CASC19-229ENST00000641418 DBN1Q16643 649 aa12.48□□□□□ -0.41
CASC19-229ENST00000641418 LRIT3Q3SXY7 679 aa12.48□□□□□ -0.41
CASC19-229ENST00000641418 GJC2Q5T442 439 aaPredicted RBP12.48□□□□□ -0.41
CASC19-229ENST00000641418 SND1Q7KZF4 910 aaKnown RBP eCLIP12.48□□□□□ -0.41
CASC19-229ENST00000641418 REPS2Q8NFH8 660 aa12.48□□□□□ -0.41
CASC19-229ENST00000641418 SLF1Q9BQI6 1058 aa12.48□□□□□ -0.41
CASC19-229ENST00000641418 NACAP1Q9BZK3 213 aa12.48□□□□□ -0.41
CASC19-229ENST00000641418 CLIP2Q9UDT6 1046 aa12.48□□□□□ -0.41
CASC19-229ENST00000641418 DIS3Q9Y2L1 958 aaKnown RBP12.48□□□□□ -0.41
CASC19-229ENST00000641418 ROBO3Q96MS0 1386 aa12.48□□□□□ -0.41
CASC19-229ENST00000641418 KBTBD13C9JR72 458 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 M0R2C6 588 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 PRDM1O75626 825 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 MICAL2O94851 1124 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 NDUFB10O96000 172 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 PGK2P07205 417 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 MTMR3Q13615 1198 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 ZNF792Q3KQV3 632 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 ANO1Q5XXA6 986 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 BTLAQ7Z6A9 289 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 IFNL3Q8IZI9 196 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 PI4K2BQ8TCG2 481 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 HSH2DQ96JZ2 352 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 NUP88Q99567 741 aaPredicted RBP12.47□□□□□ -0.41
CASC19-229ENST00000641418 ZCCHC2Q9C0B9 1178 aaKnown RBP12.47□□□□□ -0.41
CASC19-229ENST00000641418 EPB41L4AQ9HCS5 686 aaPredicted RBP12.47□□□□□ -0.41
CASC19-229ENST00000641418 ZNF214Q9UL59 606 aaPredicted RBP12.47□□□□□ -0.41
CASC19-229ENST00000641418 PCDHGC4Q9Y5F7 938 aa12.47□□□□□ -0.41
CASC19-229ENST00000641418 IGKV6D-41A0A0C4DH26 115 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 MPSTP25325 297 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 RTP1P59025 263 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 AAMPQ13685 434 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 SLC39A5Q6ZMH5 540 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 SV2AQ7L0J3 742 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 TREML1Q86YW5 311 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 PRPF38AQ8NAV1 312 aaKnown RBP12.46□□□□□ -0.41
CASC19-229ENST00000641418 NANOS1Q8WY41 292 aaKnown RBP12.46□□□□□ -0.41
CASC19-229ENST00000641418 MKL1Q969V6 931 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 LBHD1Q9BQE6 289 aaPredicted RBP12.46□□□□□ -0.41
CASC19-229ENST00000641418 TINF2Q9BSI4 451 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 FSD1Q9BTV5 496 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 TEX13BQ9BXU2 312 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 MTMR4Q9NYA4 1195 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 PRKAG2Q9UGJ0 569 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 SYNPO2Q9UMS6 1093 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 PHF24Q9UPV7 400 aa12.46□□□□□ -0.41
CASC19-229ENST00000641418 ATXN7O15265 892 aaPredicted RBP12.45□□□□□ -0.42
CASC19-229ENST00000641418 ZBED4O75132 1171 aa12.45□□□□□ -0.42
CASC19-229ENST00000641418 SLC3A2P08195 630 aaKnown RBP12.45□□□□□ -0.42
CASC19-229ENST00000641418 EPB42P16452 691 aa12.45□□□□□ -0.42
CASC19-229ENST00000641418 MX1P20591 662 aa12.45□□□□□ -0.42
CASC19-229ENST00000641418 PDE4BQ07343 736 aa12.45□□□□□ -0.42
CASC19-229ENST00000641418 LRRC41Q15345 812 aa12.45□□□□□ -0.42
CASC19-229ENST00000641418 ZMYM1Q5SVZ6 1142 aa12.45□□□□□ -0.42
CASC19-229ENST00000641418 SNRNP48Q6IEG0 339 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms