RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 SNCAIPQ9Y6H5 919 aa18.39■□□□□ 0.53
PHGDH-216ENST00000641375 OTOFQ9HC10 1997 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 MYPNQ86TC9 1320 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 RPTORQ8N122 1335 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 RPA1P27694 616 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 EPHX2P34913 555 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 TERF1P54274 439 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 STX17P56962 302 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 GSDMDP57764 484 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 RBM10P98175 930 aaKnown RBP18.38■□□□□ 0.53
PHGDH-216ENST00000641375 ECM1Q16610 540 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 NCAPH2Q6IBW4 605 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 CATSPERGQ6ZRH7 1159 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 UNC13DQ70J99 1090 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 NELFBQ8WX92 580 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 TRERF1Q96PN7 1200 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 UIMC1Q96RL1 719 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 HOMER2Q9NSB8 354 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 SAMSN1Q9NSI8 373 aaKnown RBP18.38■□□□□ 0.53
PHGDH-216ENST00000641375 KIAA1024Q9UPX6 916 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 SCN4AP35499 1836 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 MYMKA6NI61 221 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 PSMA7O14818 248 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 STAT3P40763 770 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 GPR162Q16538 588 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 KCNK18Q7Z418 384 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 MAP7D2Q96T17 732 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 BMP2KQ9NSY1 1161 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-216ENST00000641375 HOXC10Q9NYD6 342 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 VAV3Q9UKW4 847 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 PTPRFP10586 1907 aa18.38■□□□□ 0.53
PHGDH-216ENST00000641375 MEIS1O00470 390 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 UBXN2AP68543 259 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 CCDC144BQ3MJ40 725 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 COBLL1Q53SF7 1204 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 MUM1L1Q5H9M0 696 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 FILIP1Q7Z7B0 1213 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 SLC5A5Q92911 643 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 CTAGE1Q96RT6 745 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 KCNF1Q9H3M0 494 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 POTEB3A0JP26 581 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 GLTPD2A6NH11 291 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 POTECB2RU33 542 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 ATP2A1O14983 1001 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 GRIN3BO60391 1043 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 LRCH2Q5VUJ6 765 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 CDKAL1Q5VV42 579 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 POTEBQ6S5H4 581 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 CATSPER3Q86XQ3 398 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 SYTL5Q8TDW5 730 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-216ENST00000641375 DHTKD1Q96HY7 919 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-216ENST00000641375 MXRA8Q9BRK3 442 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 COL20A1Q9P218 1284 aa18.37■□□□□ 0.53
PHGDH-216ENST00000641375 MED24O75448 989 aa18.36■□□□□ 0.53
PHGDH-216ENST00000641375 PSMD10O75832 226 aa18.36■□□□□ 0.53
PHGDH-216ENST00000641375 BCRP11274 1271 aa18.36■□□□□ 0.53
PHGDH-216ENST00000641375 RPS6P62753 249 aaKnown RBP18.36■□□□□ 0.53
PHGDH-216ENST00000641375 PPP2R5CQ13362 524 aa18.36■□□□□ 0.53
PHGDH-216ENST00000641375 HSP90AA4PQ58FG1 418 aa18.36■□□□□ 0.53
PHGDH-216ENST00000641375 RNF207Q6ZRF8 634 aa18.36■□□□□ 0.53
PHGDH-216ENST00000641375 NIPA1Q7RTP0 329 aa18.36■□□□□ 0.53
PHGDH-216ENST00000641375 REPS2Q8NFH8 660 aa18.36■□□□□ 0.53
PHGDH-216ENST00000641375 DDX12PQ92771 950 aa18.36■□□□□ 0.53
PHGDH-216ENST00000641375 POLR3CQ9BUI4 534 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-216ENST00000641375 FRMPD4Q14CM0 1322 aa18.36■□□□□ 0.53
PHGDH-216ENST00000641375 IQCA1LA6NCM1 817 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 SPAG1Q07617 926 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 PSMD2Q13200 908 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 PCNX4Q63HM2 1172 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 OTOP1Q7RTM1 612 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 TMC6Q7Z403 805 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 ZNF577Q9BSK1 485 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 WDR11Q9BZH6 1224 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 MAF1Q9H063 256 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 DNM3Q9UQ16 869 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 MAPK8IP1Q9UQF2 711 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 PLA2G4BP0C869 781 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 SNRNP48Q6IEG0 339 aaKnown RBP18.35■□□□□ 0.53
PHGDH-216ENST00000641375 DLK2Q6UY11 383 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 DYMQ7RTS9 669 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 LRRC8AQ8IWT6 810 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 ANKRD13AQ8IZ07 590 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 WNK4Q96J92 1243 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 RNF146Q9NTX7 359 aa18.35■□□□□ 0.53
PHGDH-216ENST00000641375 ZNF214Q9UL59 606 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-216ENST00000641375 BICDL2A1A5D9 508 aa18.34■□□□□ 0.53
PHGDH-216ENST00000641375 E9PMD0 336 aa18.34■□□□□ 0.53
PHGDH-216ENST00000641375 GAS7O60861 476 aa18.34■□□□□ 0.53
PHGDH-216ENST00000641375 PPATQ06203 517 aa18.34■□□□□ 0.53
PHGDH-216ENST00000641375 STK4Q13043 487 aa18.34■□□□□ 0.53
PHGDH-216ENST00000641375 TKFCQ3LXA3 575 aa18.34■□□□□ 0.53
PHGDH-216ENST00000641375 ANKRD20A12PQ8NF67 263 aa18.34■□□□□ 0.53
PHGDH-216ENST00000641375 CDCA5Q96FF9 252 aa18.34■□□□□ 0.53
PHGDH-216ENST00000641375 RIT2Q99578 217 aa18.34■□□□□ 0.53
PHGDH-216ENST00000641375 TEX13BQ9BXU2 312 aa18.34■□□□□ 0.53
PHGDH-216ENST00000641375 SPATA31C1P0DKV0 1188 aa18.34■□□□□ 0.53
PHGDH-216ENST00000641375 VSTM4Q8IW00 320 aa18.34■□□□□ 0.53
PHGDH-216ENST00000641375 EIF2AK1Q9BQI3 630 aaKnown RBP18.34■□□□□ 0.53
PHGDH-216ENST00000641375 TUFT1Q9NNX1 390 aa18.34■□□□□ 0.53
PHGDH-216ENST00000641375 A0A1B0GTH6 734 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms