RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 MSH4O15457 936 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 FGFR1OPO95684 399 aaKnown RBP10.88□□□□□ -0.67
PHGDH-215ENST00000641371 FAM86B2P0C5J1 330 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 PRKCSHP14314 528 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-215ENST00000641371 OSBPP22059 807 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 MSNP26038 577 aaKnown RBP10.88□□□□□ -0.67
PHGDH-215ENST00000641371 IRX3P78415 501 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-215ENST00000641371 PAK1Q13153 545 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 CUL4BQ13620 913 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 TTLL12Q14166 644 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-215ENST00000641371 NCAPHQ15003 741 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 PWP2Q15269 919 aaKnown RBP10.88□□□□□ -0.67
PHGDH-215ENST00000641371 TPD52L1Q16890 204 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-215ENST00000641371 LRCH2Q5VUJ6 765 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 PRAMEF18Q5VWM3 479 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.88□□□□□ -0.67
PHGDH-215ENST00000641371 RDM1Q8NG50 284 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 SYTL5Q8TDW5 730 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-215ENST00000641371 ERCC4Q92889 916 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-215ENST00000641371 TEKT3Q9BXF9 490 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 TBC1D22BQ9NU19 505 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 KCND2Q9NZV8 630 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 PNMA3Q9UL41 463 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 ZNF214Q9UL59 606 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-215ENST00000641371 DNM3Q9UQ16 869 aa10.88□□□□□ -0.67
PHGDH-215ENST00000641371 SPDYE16A6NNV3 312 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-215ENST00000641371 PP2D1A8MPX8 630 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 DKC1O60832 514 aaKnown RBP eCLIP10.87□□□□□ -0.671e-16■■■■■ 39.7
PHGDH-215ENST00000641371 GAS7O60861 476 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 SLC25A27O95847 323 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 CCND2P30279 289 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 CDC25AP30304 524 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 STAT3P40763 770 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 RPS6P62753 249 aaKnown RBP10.87□□□□□ -0.67
PHGDH-215ENST00000641371 ASIC1P78348 528 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 SPIRE1Q08AE8 756 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 FILIP1LQ4L180 1135 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 SNRNP48Q6IEG0 339 aaKnown RBP10.87□□□□□ -0.67
PHGDH-215ENST00000641371 SAMD1Q6SPF0 538 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-215ENST00000641371 NLRX1Q86UT6 975 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 FAM114A1Q8IWE2 563 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 CCDC65Q8IXS2 484 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 DRC7Q8IY82 874 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 GRAMD1CQ8IYS0 662 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 GIMAP8Q8ND71 665 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-215ENST00000641371 DNERQ8NFT8 737 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 NSUN6Q8TEA1 469 aaKnown RBP10.87□□□□□ -0.67
PHGDH-215ENST00000641371 GPRASP2Q96D09 838 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 PNMA5Q96PV4 448 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 IWS1Q96ST2 819 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 ZNF577Q9BSK1 485 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 JADE2Q9NQC1 790 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 AGTPBP1Q9UPW5 1226 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 SLC45A1Q9Y2W3 748 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 UBIAD1Q9Y5Z9 338 aa10.87□□□□□ -0.67
PHGDH-215ENST00000641371 ESPNB1AK53 854 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 NFIBO00712 420 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 PSMD10O75832 226 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 SERPINC1P01008 464 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 CDK11BP21127 795 aaKnown RBP10.86□□□□□ -0.67
PHGDH-215ENST00000641371 BMP6P22004 513 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 SFNP31947 248 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 FANCCQ00597 558 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 PDE4DQ08499 809 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 SNAPC2Q13487 334 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 EPHA7Q15375 998 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 GNPTABQ3T906 1256 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 KMT5BQ4FZB7 885 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 EAPPQ56P03 285 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-215ENST00000641371 LDLRAD1Q5T700 205 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 ARHGEF16Q5VV41 709 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 NCAPH2Q6IBW4 605 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 OTOP1Q7RTM1 612 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 RIOX2Q8IUF8 465 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 FAM43AQ8N2R8 423 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 RMDN3Q96TC7 470 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 P2RX7Q99572 595 aaKnown RBP10.86□□□□□ -0.67
PHGDH-215ENST00000641371 MTRQ99707 1265 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 BLZF1Q9H2G9 400 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 PXMP2Q9NR77 195 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 BLOC1S4Q9NUP1 217 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 VAV3Q9UKW4 847 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 ZKSCAN5Q9Y2L8 839 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 NFE2L3Q9Y4A8 694 aa10.86□□□□□ -0.67
PHGDH-215ENST00000641371 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.85□□□□□ -0.67
PHGDH-215ENST00000641371 PPP1R3GB7ZBB8 358 aa10.85□□□□□ -0.67
PHGDH-215ENST00000641371 IPO5O00410 1097 aaKnown RBP10.85□□□□□ -0.67
PHGDH-215ENST00000641371 KLRC4O43908 158 aa10.85□□□□□ -0.67
PHGDH-215ENST00000641371 TPM2P07951 284 aa10.85□□□□□ -0.67
PHGDH-215ENST00000641371 PLA2G4BP0C869 781 aa10.85□□□□□ -0.67
PHGDH-215ENST00000641371 ZNF18P17022 549 aa10.85□□□□□ -0.67
PHGDH-215ENST00000641371 JAK3P52333 1124 aa10.85□□□□□ -0.67
PHGDH-215ENST00000641371 UBASH3AP57075 661 aa10.85□□□□□ -0.67
PHGDH-215ENST00000641371 KRT76Q01546 638 aa10.85□□□□□ -0.67
PHGDH-215ENST00000641371 MTMR1Q13613 665 aa10.85□□□□□ -0.67
PHGDH-215ENST00000641371 TMEM132BQ14DG7 1078 aa10.85□□□□□ -0.67
PHGDH-215ENST00000641371 ISM2Q6H9L7 571 aa10.85□□□□□ -0.67
PHGDH-215ENST00000641371 NSMFQ6X4W1 530 aa10.85□□□□□ -0.67
PHGDH-215ENST00000641371 ADSSL1Q8N142 457 aa10.85□□□□□ -0.67
PHGDH-215ENST00000641371 GUF1Q8N442 669 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms