RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 NCOA7Q8NI08 942 aa19.37■□□□□ 0.69
PHGDH-213ENST00000641272 ARNTL2Q8WYA1 636 aa19.37■□□□□ 0.69
PHGDH-213ENST00000641272 EMID1Q96A84 441 aaPredicted RBP19.37■□□□□ 0.69
PHGDH-213ENST00000641272 KATNAL1Q9BW62 490 aa19.37■□□□□ 0.69
PHGDH-213ENST00000641272 GCOM1H8Y6P7 765 aaPredicted RBP19.36■□□□□ 0.69
PHGDH-213ENST00000641272 SGSM2O43147 1006 aa19.36■□□□□ 0.69
PHGDH-213ENST00000641272 POLR2MP0CAP2 368 aa19.36■□□□□ 0.69
PHGDH-213ENST00000641272 CCND2P30279 289 aa19.36■□□□□ 0.69
PHGDH-213ENST00000641272 WDR5P61964 334 aaKnown RBP19.36■□□□□ 0.69
PHGDH-213ENST00000641272 DEFB103AP81534 67 aa19.36■□□□□ 0.69
PHGDH-213ENST00000641272 LAMC2Q13753 1193 aa19.36■□□□□ 0.69
PHGDH-213ENST00000641272 HIC1Q14526 733 aa19.36■□□□□ 0.69
PHGDH-213ENST00000641272 GPNMBQ14956 572 aa19.36■□□□□ 0.69
PHGDH-213ENST00000641272 HSDL1Q3SXM5 330 aa19.36■□□□□ 0.69
PHGDH-213ENST00000641272 KRT40Q6A162 431 aa19.36■□□□□ 0.69
PHGDH-213ENST00000641272 SPATA33Q96N06 139 aa19.36■□□□□ 0.69
PHGDH-213ENST00000641272 RIOX1Q9H6W3 641 aa19.36■□□□□ 0.69
PHGDH-213ENST00000641272 PRRC2BQ5JSZ5 2229 aaKnown RBP19.35■□□□□ 0.69
PHGDH-213ENST00000641272 HAS3O00219 553 aa19.35■□□□□ 0.69
PHGDH-213ENST00000641272 NBNO60934 754 aa19.35■□□□□ 0.69
PHGDH-213ENST00000641272 CKBP12277 381 aa19.35■□□□□ 0.69
PHGDH-213ENST00000641272 SP2Q02086 613 aa19.35■□□□□ 0.69
PHGDH-213ENST00000641272 TROAPQ12815 778 aa19.35■□□□□ 0.69
PHGDH-213ENST00000641272 SART3Q15020 963 aaKnown RBP19.35■□□□□ 0.69
PHGDH-213ENST00000641272 SKIV2LQ15477 1246 aaKnown RBP19.35■□□□□ 0.69
PHGDH-213ENST00000641272 CELF3Q5SZQ8 465 aaKnown RBP19.35■□□□□ 0.69
PHGDH-213ENST00000641272 RBM8AQ9Y5S9 174 aaKnown RBP19.35■□□□□ 0.69
PHGDH-213ENST00000641272 TCF20Q9UGU0 1960 aaKnown RBP19.34■□□□□ 0.69
PHGDH-213ENST00000641272 LCHNA4D1U4 455 aa19.34■□□□□ 0.69
PHGDH-213ENST00000641272 TLL1O43897 1013 aa19.34■□□□□ 0.69
PHGDH-213ENST00000641272 BAIAP3O94812 1187 aa19.34■□□□□ 0.69
PHGDH-213ENST00000641272 TAP1Q03518 808 aa19.34■□□□□ 0.69
PHGDH-213ENST00000641272 MYSM1Q5VVJ2 828 aa19.34■□□□□ 0.69
PHGDH-213ENST00000641272 CATIPQ7Z7H3 387 aa19.34■□□□□ 0.69
PHGDH-213ENST00000641272 VSIG10LQ86VR7 867 aa19.34■□□□□ 0.69
PHGDH-213ENST00000641272 MB21D2Q8IYB1 491 aaPredicted RBP19.34■□□□□ 0.69
PHGDH-213ENST00000641272 ASB2Q96Q27 587 aa19.34■□□□□ 0.69
PHGDH-213ENST00000641272 BCAS3Q9H6U6 928 aa19.34■□□□□ 0.69
PHGDH-213ENST00000641272 MICAL3Q7RTP6 2002 aa19.34■□□□□ 0.69
PHGDH-213ENST00000641272 REV3LO60673 3130 aa19.33■□□□□ 0.69
PHGDH-213ENST00000641272 PNMA6FA0A0J9YX94 578 aa19.33■□□□□ 0.68
PHGDH-213ENST00000641272 TFF2Q03403 129 aa19.33■□□□□ 0.68
PHGDH-213ENST00000641272 RBL2Q08999 1139 aa19.33■□□□□ 0.68
PHGDH-213ENST00000641272 COL9A3Q14050 684 aaPredicted RBP19.33■□□□□ 0.68
PHGDH-213ENST00000641272 ZNF618Q5T7W0 954 aa19.33■□□□□ 0.68
PHGDH-213ENST00000641272 FAM117BQ6P1L5 589 aa19.33■□□□□ 0.68
PHGDH-213ENST00000641272 CNKSR3Q6P9H4 555 aa19.33■□□□□ 0.68
PHGDH-213ENST00000641272 RAB11FIP4Q86YS3 637 aa19.33■□□□□ 0.68
PHGDH-213ENST00000641272 ADAMTS19Q8TE59 1207 aa19.33■□□□□ 0.68
PHGDH-213ENST00000641272 ATXN2LQ8WWM7 1075 aaKnown RBP19.33■□□□□ 0.68
PHGDH-213ENST00000641272 HOXD8P13378 290 aaPredicted RBP19.32■□□□□ 0.68
PHGDH-213ENST00000641272 MRPS5P82675 430 aaKnown RBP19.32■□□□□ 0.68
PHGDH-213ENST00000641272 SP4Q02446 784 aa19.32■□□□□ 0.68
PHGDH-213ENST00000641272 PTK7Q13308 1070 aa19.32■□□□□ 0.68
PHGDH-213ENST00000641272 TRIM71Q2Q1W2 868 aaKnown RBP19.32■□□□□ 0.68
PHGDH-213ENST00000641272 TRAF7Q6Q0C0 670 aa19.32■□□□□ 0.68
PHGDH-213ENST00000641272 TRIM50Q86XT4 487 aa19.32■□□□□ 0.68
PHGDH-213ENST00000641272 ZNF654Q8IZM8 581 aa19.32■□□□□ 0.68
PHGDH-213ENST00000641272 IL27Q8NEV9 243 aa19.32■□□□□ 0.68
PHGDH-213ENST00000641272 PHOSPHO2Q8TCD6 241 aa19.32■□□□□ 0.68
PHGDH-213ENST00000641272 GDPD5Q8WTR4 605 aa19.32■□□□□ 0.68
PHGDH-213ENST00000641272 MLXIPQ9HAP2 919 aa19.32■□□□□ 0.68
PHGDH-213ENST00000641272 MTCH2Q9Y6C9 303 aa19.32■□□□□ 0.68
PHGDH-213ENST00000641272 SIP14410 1827 aa19.32■□□□□ 0.68
PHGDH-213ENST00000641272 KIF28PB7ZC32 967 aa19.31■□□□□ 0.68
PHGDH-213ENST00000641272 GTPBP6O43824 516 aaPredicted RBP19.31■□□□□ 0.68
PHGDH-213ENST00000641272 RXRAP19793 462 aa19.31■□□□□ 0.68
PHGDH-213ENST00000641272 SEMA3FQ13275 785 aa19.31■□□□□ 0.68
PHGDH-213ENST00000641272 MBTPS1Q14703 1052 aa19.31■□□□□ 0.68
PHGDH-213ENST00000641272 KCNV1Q6PIU1 500 aa19.31■□□□□ 0.68
PHGDH-213ENST00000641272 CTCFLQ8NI51 663 aaPredicted RBP19.31■□□□□ 0.68
PHGDH-213ENST00000641272 NECAB3Q96P71 396 aaPredicted RBP19.31■□□□□ 0.68
PHGDH-213ENST00000641272 C16orf70Q9BSU1 422 aa19.31■□□□□ 0.68
PHGDH-213ENST00000641272 ZBED2Q9BTP6 218 aa19.31■□□□□ 0.68
PHGDH-213ENST00000641272 LY9Q9HBG7 655 aa19.31■□□□□ 0.68
PHGDH-213ENST00000641272 MAP3K20Q9NYL2 800 aaKnown RBP19.31■□□□□ 0.68
PHGDH-213ENST00000641272 RTEL1Q9NZ71 1219 aa19.31■□□□□ 0.68
PHGDH-213ENST00000641272 MTUS1Q9ULD2 1270 aa19.31■□□□□ 0.68
PHGDH-213ENST00000641272 TELO2Q9Y4R8 837 aa19.31■□□□□ 0.68
PHGDH-213ENST00000641272 FRMPD4Q14CM0 1322 aa19.3■□□□□ 0.68
PHGDH-213ENST00000641272 TNFRSF10AO00220 468 aa19.3■□□□□ 0.68
PHGDH-213ENST00000641272 PRC1O43663 620 aa19.3■□□□□ 0.68
PHGDH-213ENST00000641272 PLEKHA8P1O95397 391 aa19.3■□□□□ 0.68
PHGDH-213ENST00000641272 CXCL10P02778 98 aa19.3■□□□□ 0.68
PHGDH-213ENST00000641272 LGALS2P05162 132 aa19.3■□□□□ 0.68
PHGDH-213ENST00000641272 CTSHP09668 335 aa19.3■□□□□ 0.68
PHGDH-213ENST00000641272 MRPS9P82933 396 aaKnown RBP19.3■□□□□ 0.68
PHGDH-213ENST00000641272 GRB10Q13322 594 aa19.3■□□□□ 0.68
PHGDH-213ENST00000641272 CMTR1Q8N1G2 835 aaKnown RBP19.3■□□□□ 0.68
PHGDH-213ENST00000641272 IGDCC4Q8TDY8 1250 aa19.3■□□□□ 0.68
PHGDH-213ENST00000641272 MAP4K1Q92918 833 aa19.3■□□□□ 0.68
PHGDH-213ENST00000641272 UHRF1Q96T88 793 aaPredicted RBP19.3■□□□□ 0.68
PHGDH-213ENST00000641272 C17orf102A2RUQ5 167 aa19.29■□□□□ 0.68
PHGDH-213ENST00000641272 NOP56O00567 594 aaKnown RBP19.29■□□□□ 0.68
PHGDH-213ENST00000641272 SMIM10L2AP0DMW4 78 aa19.29■□□□□ 0.68
PHGDH-213ENST00000641272 SMIM10L2BP0DMW5 78 aa19.29■□□□□ 0.68
PHGDH-213ENST00000641272 THPOP40225 353 aa19.29■□□□□ 0.68
PHGDH-213ENST00000641272 KCNQ1P51787 676 aa19.29■□□□□ 0.68
PHGDH-213ENST00000641272 TRAF1Q13077 416 aa19.29■□□□□ 0.68
PHGDH-213ENST00000641272 USP17L6PQ6QN14 398 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 429.8 ms