RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 MYSM1Q5VVJ2 828 aa16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 APOA5Q6Q788 366 aa16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 SYNE3Q6ZMZ3 975 aa16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 DHX32Q7L7V1 743 aaKnown RBP16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 OTOP2Q7RTS6 562 aa16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 SPATA33Q96N06 139 aa16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 CDX2Q99626 313 aaPredicted RBP16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 ALG1Q9BT22 464 aa16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 MTIF3Q9H2K0 278 aaKnown RBP16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 PRUNE2Q8WUY3 3088 aa16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 TMEM265A0A087WTH1 108 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 PIK3CDO00329 1044 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 MEIS2O14770 477 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 F2P00734 622 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 TGFB3P10600 412 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 PSEN2P49810 448 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 MRPS9P82933 396 aaKnown RBP16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 EXOSC10Q01780 885 aaKnown RBP16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 KRT32Q14532 448 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 MFSD10Q14728 455 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 PTGISQ16647 500 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 GNPTABQ3T906 1256 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 GDF6Q6KF10 455 aaPredicted RBP16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 DEFB128Q7Z7B8 93 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 SESTD1Q86VW0 696 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 RPUSD2Q8IZ73 545 aaKnown RBP16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 TIFAQ96CG3 184 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 VWCEQ96DN2 955 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 KATNAL1Q9BW62 490 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 RTEL1Q9NZ71 1219 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 BRPF3Q9ULD4 1205 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 CNTNAP5Q8WYK1 1306 aa16.59■□□□□ 0.25
HNRNPU-229ENST00000640440 PTPRSQ13332 1948 aa16.58■□□□□ 0.25
HNRNPU-229ENST00000640440 CHD9Q3L8U1 2897 aa16.58■□□□□ 0.25
HNRNPU-229ENST00000640440 PITPNM1O00562 1244 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 ZBTB43O43298 467 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 NEFLP07196 543 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 HOXD8P13378 290 aaPredicted RBP16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 PBX2P40425 430 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 BFSP2Q13515 415 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 RTN1Q16799 776 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 KIAA0753Q2KHM9 967 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 HSDL1Q3SXM5 330 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 HEATR3Q7Z4Q2 680 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 RETREG2Q8NC44 543 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 SLC17A8Q8NDX2 589 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 INPP4AQ96PE3 977 aaPredicted RBP16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 PBX4Q9BYU1 374 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 PSTPIP2Q9H939 334 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 MLXIPQ9HAP2 919 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 RBM28Q9NW13 759 aaKnown RBP16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 HDAC6Q9UBN7 1215 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 GTF2IRD1Q9UHL9 959 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 UNC80Q8N2C7 3258 aa16.58■□□□□ 0.24
HNRNPU-229ENST00000640440 ZBBXA8MT70 800 aa16.57■□□□□ 0.24
HNRNPU-229ENST00000640440 STAM2O75886 525 aa16.57■□□□□ 0.24
HNRNPU-229ENST00000640440 SEMA3FQ13275 785 aa16.57■□□□□ 0.24
HNRNPU-229ENST00000640440 UBE2SQ16763 222 aa16.57■□□□□ 0.24
HNRNPU-229ENST00000640440 PCNX4Q63HM2 1172 aa16.57■□□□□ 0.24
HNRNPU-229ENST00000640440 C7orf31Q8N865 590 aa16.57■□□□□ 0.24
HNRNPU-229ENST00000640440 MYLIPQ8WY64 445 aa16.57■□□□□ 0.24
HNRNPU-229ENST00000640440 CTAGE1Q96RT6 745 aa16.57■□□□□ 0.24
HNRNPU-229ENST00000640440 BCAS3Q9H6U6 928 aa16.57■□□□□ 0.24
HNRNPU-229ENST00000640440 CHD7Q9P2D1 2997 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 KLF18A0A0U1RQI7 1052 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 GOLGA8AA7E2F4 631 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 GOLGA8BA8MQT2 603 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 SPATA31C2B4DYI2 1134 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 HAS3O00219 553 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 NOP56O00567 594 aaKnown RBP16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 FIBPO43427 364 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 PPFIA4O75335 1185 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 PFKMP08237 780 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 IQCF3P0C7M6 154 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 CPA1P15085 419 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 ICAM3P32942 547 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 FGD1P98174 961 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 CCDC155Q8N6L0 562 aa16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 NAP1L2Q9ULW6 460 aaPredicted RBP16.56■□□□□ 0.24
HNRNPU-229ENST00000640440 MICAL3Q7RTP6 2002 aa16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 HMGB1P09429 215 aaKnown RBP16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 HSPA4P34932 840 aa16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 RFC2P35250 354 aa16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 NEDD9Q14511 834 aa16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 WWC2Q6AWC2 1192 aa16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 XRRA1Q6P2D8 792 aa16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 METTL7BQ6UX53 244 aa16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 CYFIP1Q7L576 1253 aa16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 CAGE1Q8TC20 777 aa16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 DHX38Q92620 1227 aaKnown RBP16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 KCNB2Q92953 911 aa16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 JAKMIP1Q96N16 626 aaKnown RBP16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 ZNF576Q9H609 170 aa16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 MSRAQ9UJ68 235 aa16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 SLC4A7Q9Y6M7 1214 aa16.55■□□□□ 0.24
HNRNPU-229ENST00000640440 SPDYE3A6NKU9 549 aa16.54■□□□□ 0.24
HNRNPU-229ENST00000640440 LGALS2P05162 132 aa16.54■□□□□ 0.24
HNRNPU-229ENST00000640440 FOSL2P15408 326 aa16.54■□□□□ 0.24
HNRNPU-229ENST00000640440 NAPAP54920 295 aa16.54■□□□□ 0.24
HNRNPU-229ENST00000640440 ZNF200P98182 395 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms