RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 RELTQ969Z4 430 aa7.58□□□□□ -1.2
CCDC7-216ENST00000640058 EPB41L1Q9H4G0 881 aa7.58□□□□□ -1.2
CCDC7-216ENST00000640058 ZNF652Q9Y2D9 606 aa7.58□□□□□ -1.2
CCDC7-216ENST00000640058 SH3D21A4FU49 640 aa7.57□□□□□ -1.2
CCDC7-216ENST00000640058 PDPK1O15530 556 aa7.57□□□□□ -1.2
CCDC7-216ENST00000640058 SMARCA5O60264 1052 aaPredicted RBP7.57□□□□□ -1.2
CCDC7-216ENST00000640058 FGFR1P11362 822 aa7.57□□□□□ -1.2
CCDC7-216ENST00000640058 IFRD2Q12894 506 aaPredicted RBP7.57□□□□□ -1.2
CCDC7-216ENST00000640058 CHRNA2Q15822 529 aa7.57□□□□□ -1.2
CCDC7-216ENST00000640058 CARFQ8N187 725 aa7.57□□□□□ -1.2
CCDC7-216ENST00000640058 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.57□□□□□ -1.2
CCDC7-216ENST00000640058 C11orf84Q9BUA3 381 aaPredicted RBP7.57□□□□□ -1.2
CCDC7-216ENST00000640058 SPATA9Q9BWV2 254 aa7.57□□□□□ -1.2
CCDC7-216ENST00000640058 RTEL1Q9NZ71 1219 aa7.57□□□□□ -1.2
CCDC7-216ENST00000640058 MSRB2Q9Y3D2 182 aa7.57□□□□□ -1.2
CCDC7-216ENST00000640058 TCRBV5S2A0A599 114 aa7.56□□□□□ -1.2
CCDC7-216ENST00000640058 B8ZZF3 427 aa7.56□□□□□ -1.2
CCDC7-216ENST00000640058 MTERF2Q49AM1 385 aa7.56□□□□□ -1.2
CCDC7-216ENST00000640058 DCAF4Q8WV16 495 aa7.56□□□□□ -1.2
CCDC7-216ENST00000640058 ZSWIM3Q96MP5 696 aa7.56□□□□□ -1.2
CCDC7-216ENST00000640058 C8orf37Q96NL8 207 aa7.56□□□□□ -1.2
CCDC7-216ENST00000640058 KRTAP4-7Q9BYR0 210 aa7.56□□□□□ -1.2
CCDC7-216ENST00000640058 CDIP1Q9H305 208 aa7.56□□□□□ -1.2
CCDC7-216ENST00000640058 USP40Q9NVE5 1235 aa7.56□□□□□ -1.2
CCDC7-216ENST00000640058 NTMQ9P121 344 aa7.56□□□□□ -1.2
CCDC7-216ENST00000640058 MYOTQ9UBF9 498 aa7.56□□□□□ -1.2
CCDC7-216ENST00000640058 SARSP49591 514 aaKnown RBP7.55□□□□□ -1.2
CCDC7-216ENST00000640058 ITGA1P56199 1179 aa7.55□□□□□ -1.2
CCDC7-216ENST00000640058 SSRP1Q08945 709 aaKnown RBP7.55□□□□□ -1.2
CCDC7-216ENST00000640058 CR1LQ2VPA4 569 aa7.55□□□□□ -1.2
CCDC7-216ENST00000640058 EMC4Q5J8M3 183 aa7.55□□□□□ -1.2
CCDC7-216ENST00000640058 TTLL7Q6ZT98 887 aa7.55□□□□□ -1.2
CCDC7-216ENST00000640058 LINC00482Q8N8I6 264 aa7.55□□□□□ -1.2
CCDC7-216ENST00000640058 PIP4K2CQ8TBX8 421 aa7.55□□□□□ -1.2
CCDC7-216ENST00000640058 KCNJ15Q99712 375 aa7.55□□□□□ -1.2
CCDC7-216ENST00000640058 DTLQ9NZJ0 730 aa7.55□□□□□ -1.2
CCDC7-216ENST00000640058 FOXD2O60548 495 aaPredicted RBP7.54□□□□□ -1.2
CCDC7-216ENST00000640058 DIAPH1O60610 1272 aaKnown RBP7.54□□□□□ -1.2
CCDC7-216ENST00000640058 TADA3O75528 432 aa7.54□□□□□ -1.2
CCDC7-216ENST00000640058 COL6A2P12110 1019 aa7.54□□□□□ -1.2
CCDC7-216ENST00000640058 GRK2P25098 689 aa7.54□□□□□ -1.2
CCDC7-216ENST00000640058 THBS2P35442 1172 aa7.54□□□□□ -1.2
CCDC7-216ENST00000640058 GRK3P35626 688 aa7.54□□□□□ -1.2
CCDC7-216ENST00000640058 NKX3-2P78367 333 aa7.54□□□□□ -1.2
CCDC7-216ENST00000640058 KYQ8NBH2 561 aa7.54□□□□□ -1.2
CCDC7-216ENST00000640058 TRAF6Q9Y4K3 522 aa7.54□□□□□ -1.2
CCDC7-216ENST00000640058 NCANO14594 1321 aa7.53□□□□□ -1.2
CCDC7-216ENST00000640058 ASXL2Q76L83 1435 aa7.53□□□□□ -1.2
CCDC7-216ENST00000640058 SLC27A2O14975 620 aa7.53□□□□□ -1.2
CCDC7-216ENST00000640058 GRIN1Q05586 938 aa7.53□□□□□ -1.2
CCDC7-216ENST00000640058 RASGRF1Q13972 1273 aa7.53□□□□□ -1.2
CCDC7-216ENST00000640058 RSPO2Q6UXX9 243 aaPredicted RBP7.53□□□□□ -1.2
CCDC7-216ENST00000640058 LBX2Q6XYB7 198 aa7.53□□□□□ -1.2
CCDC7-216ENST00000640058 RBM12BQ8IXT5 1001 aaKnown RBP7.53□□□□□ -1.2
CCDC7-216ENST00000640058 TOE1Q96GM8 510 aaKnown RBP7.53□□□□□ -1.2
CCDC7-216ENST00000640058 CDC6Q99741 560 aa7.53□□□□□ -1.2
CCDC7-216ENST00000640058 KRIT1O00522 736 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 PRRG2O14669 202 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 ADCY3O60266 1144 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 BUD31P41223 144 aaPredicted RBP7.52□□□□□ -1.21
CCDC7-216ENST00000640058 GJA9P57773 515 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 GPR85P60893 370 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 KIZQ2M2Z5 673 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 FOXB2Q5VYV0 432 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 STYK1Q6J9G0 422 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 FRMD5Q7Z6J6 570 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 FERMT3Q86UX7 667 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 IFNL3Q8IZI9 196 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 DDX1Q92499 740 aaKnown RBP7.52□□□□□ -1.21
CCDC7-216ENST00000640058 HIRIP3Q9BW71 556 aaPredicted RBP7.52□□□□□ -1.21
CCDC7-216ENST00000640058 CCDC113Q9H0I3 377 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 SMOC1Q9H4F8 434 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 PCDH18Q9HCL0 1135 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 SIRPGQ9P1W8 387 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 RBPJLQ9UBG7 517 aa7.52□□□□□ -1.21
CCDC7-216ENST00000640058 PRICKLE3O43900 615 aaPredicted RBP7.51□□□□□ -1.21
CCDC7-216ENST00000640058 MAFKO60675 156 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 LRG1P02750 347 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 GNAT1P11488 350 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 ADAM9Q13443 819 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 FAM209AQ5JX71 171 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 NBPF6Q5VWK0 638 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 TEPPQ6URK8 271 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 TMC5Q6UXY8 1006 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 ZNF761Q86XN6 746 aaPredicted RBP7.51□□□□□ -1.21
CCDC7-216ENST00000640058 TTLL6Q8N841 843 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 ADAMTS17Q8TE56 1095 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 ZNF669Q96BR6 464 aaPredicted RBP7.51□□□□□ -1.21
CCDC7-216ENST00000640058 NBPF4Q96M43 638 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 TEPSINQ96N21 525 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 IPPKQ9H8X2 491 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 SLC6A20Q9NP91 592 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 ASH2LQ9UBL3 628 aa7.51□□□□□ -1.21
CCDC7-216ENST00000640058 TRBV23-1A0A0A0MS06 115 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 NOBOXO60393 691 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 LTFP02788 710 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 SOD2P04179 222 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 FAM153BP0C7A2 387 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 SYN1P17600 705 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 RPL13P26373 211 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms