RNA–Protein interactions for RNA: ENST00000638716.1

HNRNPU-216, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 2,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-216ENST00000638716 SMARCAL1Q9NZC9 954 aa10.57□□□□□ -0.72
HNRNPU-216ENST00000638716 EHD2Q9NZN4 543 aa10.57□□□□□ -0.72
HNRNPU-216ENST00000638716 RSPH14Q9UHP6 348 aa10.57□□□□□ -0.72
HNRNPU-216ENST00000638716 RTCBQ9Y3I0 505 aaKnown RBP10.57□□□□□ -0.72
HNRNPU-216ENST00000638716 NCK2O43639 380 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 RHBDL3P58872 404 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 RASSF7Q02833 373 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 MAPK8IP2Q13387 824 aaPredicted RBP10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 ECM1Q16610 540 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 CCDC181Q5TID7 509 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 ZNF772Q68DY9 489 aaPredicted RBP10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 C15orf52Q6ZUT6 534 aaKnown RBP10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 RUBCNQ92622 972 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 TSG101Q99816 390 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 TANGO6Q9C0B7 1094 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 PLEKHA4Q9H4M7 779 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 RIC8AQ9NPQ8 531 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 GPSM2P81274 684 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 TMEM119Q4V9L6 283 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 HGSNATQ68CP4 663 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 MTMR8Q96EF0 704 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 EDEM3Q9BZQ6 932 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 LRRC27Q9C0I9 530 aa10.56□□□□□ -0.72
HNRNPU-216ENST00000638716 SSU72P8A0A1W2PR75 194 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 GOLGA6CA6NDK9 693 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 BUB1O43683 1085 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 PPFIA4O75335 1185 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 GOLGA6DP0CG33 693 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 PLCG2P16885 1265 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 HOXA7P31268 230 aaPredicted RBP10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 SLC1A4P43007 532 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 PAFAH1B1P43034 410 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 KLHDC7AQ5VTJ3 777 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 HAUS3Q68CZ6 603 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 MYOCDQ8IZQ8 938 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 LRRC47Q8N1G4 583 aaKnown RBP10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 PROM2Q8N271 834 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 FAM76AQ8TAV0 307 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 DNAJC19Q96DA6 116 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 TLR10Q9BXR5 811 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 TRIM34Q9BYJ4 488 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 NLRC4Q9NPP4 1024 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 GOLGA6AQ9NYA3 693 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 FKBP3Q00688 224 aaKnown RBP10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 COASYQ13057 564 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 TDRD12Q587J7 1177 aaKnown RBP10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 FOXR2Q6PJQ5 311 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 BBXQ8WY36 941 aaPredicted RBP10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 UPF1Q92900 1129 aaKnown RBP eCLIP10.55□□□□□ -0.722e-11■■■□□ 14.6
HNRNPU-216ENST00000638716 NOX5Q96PH1 765 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 MTMR4Q9NYA4 1195 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 STIM2Q9P246 746 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 COL4A3BPQ9Y5P4 624 aa10.55□□□□□ -0.72
HNRNPU-216ENST00000638716 RBAK-RBAKDNI3L0D1 243 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 TRAF5O00463 557 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 SHOX2O60902 331 aaPredicted RBP10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 NOL4O94818 638 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 IL1R1P14778 569 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 TNNI2P48788 182 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 UBE2SQ16763 222 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 ZCWPW2Q504Y3 356 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 ASPRV1Q53RT3 343 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 PPP4R3AQ6IN85 833 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 RNF10Q8N5U6 811 aaKnown RBP10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 GJA10Q969M2 543 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 GPCPD1Q9NPB8 672 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 RBM12Q9NTZ6 932 aaKnown RBP10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 CEP72Q9P209 647 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 LY75O60449 1722 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 UFL1O94874 794 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 EPHB4P54760 987 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 NAP1L1P55209 391 aaKnown RBP10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 EIF6P56537 245 aaKnown RBP10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 SLC9C1Q4G0N8 1177 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 CCDC40Q4G0X9 1142 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 MFSD14BQ5SR56 506 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 SFMBT2Q5VUG0 894 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 TMC4Q7Z404 712 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 HAS1Q92839 578 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 FAM163AQ96GL9 167 aaPredicted RBP10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 MS4A14Q96JA4 679 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 SH3GL2Q99962 352 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 PANK4Q9NVE7 773 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 DDX25Q9UHL0 483 aaKnown RBP10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 CCNL1Q9UK58 526 aaPredicted RBP10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 PLIN4Q96Q06 1357 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 TLR2O60603 784 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 SERPING1P05155 500 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 SNHG28P0DPA3 235 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 RFC4P35249 363 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 CLK2P49760 499 aaKnown RBP10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 FAM83BQ5T0W9 1011 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 C8orf74Q6P047 294 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 EMBQ6PCB8 327 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 ARHGAP27Q6ZUM4 889 aa10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 TSEN2Q8NCE0 465 aaKnown RBP10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 NUCKS1Q9H1E3 243 aaKnown RBP10.54□□□□□ -0.72
HNRNPU-216ENST00000638716 GAKO14976 1311 aa10.53□□□□□ -0.72
HNRNPU-216ENST00000638716 PNMA6FA0A0J9YX94 578 aa10.53□□□□□ -0.72
HNRNPU-216ENST00000638716 GOLGA8KD6RF30 607 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms