RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 KIAA1217Q5T5P2 1943 aa22.07■■□□□ 1.12
HLA-A-209ENST00000638375 ATP2B1P20020 1258 aa22.06■■□□□ 1.12
HLA-A-209ENST00000638375 TOB1P50616 345 aaPredicted RBP22.06■■□□□ 1.12
HLA-A-209ENST00000638375 SP2Q02086 613 aa22.06■■□□□ 1.12
HLA-A-209ENST00000638375 TNFAIP2Q03169 654 aa22.06■■□□□ 1.12
HLA-A-209ENST00000638375 MTMR1Q13613 665 aa22.06■■□□□ 1.12
HLA-A-209ENST00000638375 LY6KQ17RY6 165 aa22.06■■□□□ 1.12
HLA-A-209ENST00000638375 DUSP28Q4G0W2 176 aa22.06■■□□□ 1.12
HLA-A-209ENST00000638375 PRR16Q569H4 304 aa22.06■■□□□ 1.12
HLA-A-209ENST00000638375 GJC2Q5T442 439 aaPredicted RBP22.06■■□□□ 1.12
HLA-A-209ENST00000638375 COPS5Q92905 334 aa22.06■■□□□ 1.12
HLA-A-209ENST00000638375 RNF208Q9H0X6 261 aa22.06■■□□□ 1.12
HLA-A-209ENST00000638375 KCNH7Q9NS40 1196 aa22.06■■□□□ 1.12
HLA-A-209ENST00000638375 DDX20Q9UHI6 824 aaKnown RBP22.06■■□□□ 1.12
HLA-A-209ENST00000638375 GNEQ9Y223 722 aaKnown RBP22.06■■□□□ 1.12
HLA-A-209ENST00000638375 SLC37A4O43826 429 aa22.05■■□□□ 1.12
HLA-A-209ENST00000638375 CCNT1O60563 726 aaKnown RBP22.05■■□□□ 1.12
HLA-A-209ENST00000638375 ZSCAN22P10073 491 aaPredicted RBP22.05■■□□□ 1.12
HLA-A-209ENST00000638375 TXNP10599 105 aaKnown RBP22.05■■□□□ 1.12
HLA-A-209ENST00000638375 PDIA4P13667 645 aaKnown RBP22.05■■□□□ 1.12
HLA-A-209ENST00000638375 Q4G0T1 1027 aa22.05■■□□□ 1.12
HLA-A-209ENST00000638375 FOXD4L5Q5VV16 416 aaPredicted RBP22.05■■□□□ 1.12
HLA-A-209ENST00000638375 PPP4R3AQ6IN85 833 aa22.05■■□□□ 1.12
HLA-A-209ENST00000638375 BRAPQ7Z569 592 aa22.05■■□□□ 1.12
HLA-A-209ENST00000638375 FOXD4L4Q8WXT5 416 aaPredicted RBP22.05■■□□□ 1.12
HLA-A-209ENST00000638375 DAXXQ9UER7 740 aaPredicted RBP22.05■■□□□ 1.12
HLA-A-209ENST00000638375 NOL7Q9UMY1 257 aaKnown RBP22.05■■□□□ 1.12
HLA-A-209ENST00000638375 ZDHHC9Q9Y397 364 aa22.05■■□□□ 1.12
HLA-A-209ENST00000638375 CENPFP49454 3210 aa22.04■■□□□ 1.12
HLA-A-209ENST00000638375 MAFGO15525 162 aa22.04■■□□□ 1.12
HLA-A-209ENST00000638375 ATP9AO75110 1047 aa22.04■■□□□ 1.12
HLA-A-209ENST00000638375 TGFB3P10600 412 aa22.04■■□□□ 1.12
HLA-A-209ENST00000638375 GCFC2P16383 781 aaKnown RBP22.04■■□□□ 1.12
HLA-A-209ENST00000638375 UBA1P22314 1058 aaKnown RBP22.04■■□□□ 1.12
HLA-A-209ENST00000638375 TRAPPC10P48553 1259 aa22.04■■□□□ 1.12
HLA-A-209ENST00000638375 SETQ01105 290 aaPredicted RBP22.04■■□□□ 1.12
HLA-A-209ENST00000638375 NBR1Q14596 966 aa22.04■■□□□ 1.12
HLA-A-209ENST00000638375 MYSM1Q5VVJ2 828 aa22.04■■□□□ 1.12
HLA-A-209ENST00000638375 LHX8Q68G74 356 aa22.04■■□□□ 1.12
HLA-A-209ENST00000638375 KCNV1Q6PIU1 500 aa22.04■■□□□ 1.12
HLA-A-209ENST00000638375 CDHR1Q96JP9 859 aa22.04■■□□□ 1.12
HLA-A-209ENST00000638375 BCAS3Q9H6U6 928 aa22.04■■□□□ 1.12
HLA-A-209ENST00000638375 AGO4Q9HCK5 861 aaKnown RBP22.04■■□□□ 1.12
HLA-A-209ENST00000638375 PKD2L1Q9P0L9 805 aa22.04■■□□□ 1.12
HLA-A-209ENST00000638375 DDX25Q9UHL0 483 aaKnown RBP22.04■■□□□ 1.12
HLA-A-209ENST00000638375 POTEFA5A3E0 1075 aa22.03■■□□□ 1.12
HLA-A-209ENST00000638375 DUSP11O75319 330 aaKnown RBP22.03■■□□□ 1.12
HLA-A-209ENST00000638375 BRD1O95696 1058 aa22.03■■□□□ 1.12
HLA-A-209ENST00000638375 KCNA2P16389 499 aa22.03■■□□□ 1.12
HLA-A-209ENST00000638375 TTC38Q5R3I4 469 aa22.03■■□□□ 1.12
HLA-A-209ENST00000638375 FAM173BQ6P4H8 233 aa22.03■■□□□ 1.12
HLA-A-209ENST00000638375 DEFB118Q96PH6 123 aa22.03■■□□□ 1.12
HLA-A-209ENST00000638375 UIMC1Q96RL1 719 aa22.03■■□□□ 1.12
HLA-A-209ENST00000638375 NAP1L4Q99733 375 aaKnown RBP22.03■■□□□ 1.12
HLA-A-209ENST00000638375 NKRFO15226 690 aaKnown RBP eCLIP22.02■■□□□ 1.12
HLA-A-209ENST00000638375 MSH4O15457 936 aa22.02■■□□□ 1.12
HLA-A-209ENST00000638375 MSCO60682 206 aa22.02■■□□□ 1.12
HLA-A-209ENST00000638375 F13A1P00488 732 aa22.02■■□□□ 1.12
HLA-A-209ENST00000638375 RARBP10826 455 aa22.02■■□□□ 1.12
HLA-A-209ENST00000638375 ITGB3BPQ13352 177 aaPredicted RBP22.02■■□□□ 1.12
HLA-A-209ENST00000638375 RILPL1Q5EBL4 403 aa22.02■■□□□ 1.12
HLA-A-209ENST00000638375 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
HLA-A-209ENST00000638375 IPO9Q96P70 1041 aaKnown RBP22.02■■□□□ 1.12
HLA-A-209ENST00000638375 SENP7Q9BQF6 1050 aa22.02■■□□□ 1.12
HLA-A-209ENST00000638375 ZSCAN16Q9H4T2 348 aaPredicted RBP22.02■■□□□ 1.12
HLA-A-209ENST00000638375 PCDHB6Q9Y5E3 794 aa22.02■■□□□ 1.12
HLA-A-209ENST00000638375 SORBS3O60504 671 aa22.01■■□□□ 1.11
HLA-A-209ENST00000638375 GGPS1O95749 300 aa22.01■■□□□ 1.11
HLA-A-209ENST00000638375 MCM7P33993 719 aa22.01■■□□□ 1.11
HLA-A-209ENST00000638375 IRX5P78411 483 aaPredicted RBP22.01■■□□□ 1.11
HLA-A-209ENST00000638375 ARHGAP1Q07960 439 aa22.01■■□□□ 1.11
HLA-A-209ENST00000638375 ZNF174Q15697 407 aa22.01■■□□□ 1.11
HLA-A-209ENST00000638375 TLK2Q86UE8 772 aa22.01■■□□□ 1.11
HLA-A-209ENST00000638375 ETNPPLQ8TBG4 499 aa22.01■■□□□ 1.11
HLA-A-209ENST00000638375 GJA10Q969M2 543 aa22.01■■□□□ 1.11
HLA-A-209ENST00000638375 KCNMB3Q9NPA1 279 aa22.01■■□□□ 1.11
HLA-A-209ENST00000638375 SYNRGQ9UMZ2 1314 aa22.01■■□□□ 1.11
HLA-A-209ENST00000638375 DYNC1LI2O43237 492 aaPredicted RBP22■■□□□ 1.11
HLA-A-209ENST00000638375 GH1P01241 217 aa22■■□□□ 1.11
HLA-A-209ENST00000638375 GJB1P08034 283 aa22■■□□□ 1.11
HLA-A-209ENST00000638375 NEDD9Q14511 834 aa22■■□□□ 1.11
HLA-A-209ENST00000638375 CELF3Q5SZQ8 465 aaKnown RBP22■■□□□ 1.11
HLA-A-209ENST00000638375 OR6J1Q8NGC5 347 aa22■■□□□ 1.11
HLA-A-209ENST00000638375 ABHD8Q96I13 439 aa22■■□□□ 1.11
HLA-A-209ENST00000638375 ZNF577Q9BSK1 485 aa22■■□□□ 1.11
HLA-A-209ENST00000638375 UPF3AQ9H1J1 476 aaKnown RBP22■■□□□ 1.11
HLA-A-209ENST00000638375 TMEM60Q9H2L4 133 aa22■■□□□ 1.11
HLA-A-209ENST00000638375 XPNPEP3Q9NQH7 507 aa22■■□□□ 1.11
HLA-A-209ENST00000638375 EIF4ENIF1Q9NRA8 985 aaKnown RBP22■■□□□ 1.11
HLA-A-209ENST00000638375 Q9Y3F1 56 aa22■■□□□ 1.11
HLA-A-209ENST00000638375 MYADML2A6NDP7 307 aa21.99■■□□□ 1.11
HLA-A-209ENST00000638375 IPO5O00410 1097 aaKnown RBP21.99■■□□□ 1.11
HLA-A-209ENST00000638375 CTAGE5O15320 804 aa21.99■■□□□ 1.11
HLA-A-209ENST00000638375 DHX15O43143 795 aaKnown RBP21.99■■□□□ 1.11
HLA-A-209ENST00000638375 NEMFO60524 1076 aa21.99■■□□□ 1.11
HLA-A-209ENST00000638375 ADAMTS4O75173 837 aa21.99■■□□□ 1.11
HLA-A-209ENST00000638375 FARP2O94887 1054 aaPredicted RBP21.99■■□□□ 1.11
HLA-A-209ENST00000638375 PGK1P00558 417 aa21.99■■□□□ 1.11
HLA-A-209ENST00000638375 GJA9P57773 515 aa21.99■■□□□ 1.11
HLA-A-209ENST00000638375 ORC2Q13416 577 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms