RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 PCDHA1Q9Y5I3 950 aa21.19■□□□□ 0.98
CTSD-209ENST00000637158 LPXNO60711 386 aa21.18■□□□□ 0.98
CTSD-209ENST00000637158 MYCLP12524 364 aaPredicted RBP21.18■□□□□ 0.98
CTSD-209ENST00000637158 CELF3Q5SZQ8 465 aaKnown RBP21.18■□□□□ 0.98
CTSD-209ENST00000637158 KRT40Q6A162 431 aa21.18■□□□□ 0.98
CTSD-209ENST00000637158 VSIG10LQ86VR7 867 aa21.18■□□□□ 0.98
CTSD-209ENST00000637158 MTMR8Q96EF0 704 aa21.18■□□□□ 0.98
CTSD-209ENST00000637158 SPATA33Q96N06 139 aa21.18■□□□□ 0.98
CTSD-209ENST00000637158 TGS1Q96RS0 853 aaKnown RBP21.18■□□□□ 0.98
CTSD-209ENST00000637158 LAMA4Q16363 1823 aa21.18■□□□□ 0.98
CTSD-209ENST00000637158 LCHNA4D1U4 455 aa21.17■□□□□ 0.98
CTSD-209ENST00000637158 ZNF286BP0CG31 522 aa21.17■□□□□ 0.98
CTSD-209ENST00000637158 ERVK-21P61565 698 aa21.17■□□□□ 0.98
CTSD-209ENST00000637158 DEFB103AP81534 67 aa21.17■□□□□ 0.98
CTSD-209ENST00000637158 TRDNQ13061 729 aa21.17■□□□□ 0.98
CTSD-209ENST00000637158 STAG2Q8N3U4 1231 aa21.17■□□□□ 0.98
CTSD-209ENST00000637158 INSL6Q9Y581 213 aa21.17■□□□□ 0.98
CTSD-209ENST00000637158 TCF20Q9UGU0 1960 aaKnown RBP21.17■□□□□ 0.98
CTSD-209ENST00000637158 OPLAHO14841 1288 aa21.16■□□□□ 0.98
CTSD-209ENST00000637158 LGR5O75473 907 aa21.16■□□□□ 0.98
CTSD-209ENST00000637158 PGM5Q15124 567 aa21.16■□□□□ 0.98
CTSD-209ENST00000637158 TRIM71Q2Q1W2 868 aaKnown RBP21.16■□□□□ 0.98
CTSD-209ENST00000637158 ZNF618Q5T7W0 954 aa21.16■□□□□ 0.98
CTSD-209ENST00000637158 MLXIPQ9HAP2 919 aa21.16■□□□□ 0.98
CTSD-209ENST00000637158 MAD2L2Q9UI95 211 aa21.16■□□□□ 0.98
CTSD-209ENST00000637158 PALM3A6NDB9 673 aaPredicted RBP21.15■□□□□ 0.98
CTSD-209ENST00000637158 GCOM1H8Y6P7 765 aaPredicted RBP21.15■□□□□ 0.98
CTSD-209ENST00000637158 RGS20O76081 388 aa21.15■□□□□ 0.98
CTSD-209ENST00000637158 GGPS1O95749 300 aa21.15■□□□□ 0.98
CTSD-209ENST00000637158 AMHP03971 560 aa21.15■□□□□ 0.98
CTSD-209ENST00000637158 POLR2MP0CAP2 368 aa21.15■□□□□ 0.98
CTSD-209ENST00000637158 CCND2P30279 289 aa21.15■□□□□ 0.98
CTSD-209ENST00000637158 SEC23AQ15436 765 aa21.15■□□□□ 0.98
CTSD-209ENST00000637158 HSDL1Q3SXM5 330 aa21.15■□□□□ 0.98
CTSD-209ENST00000637158 TRAF7Q6Q0C0 670 aa21.15■□□□□ 0.98
CTSD-209ENST00000637158 SUGCTQ9HAC7 445 aa21.15■□□□□ 0.98
CTSD-209ENST00000637158 MYH6P13533 1939 aa21.15■□□□□ 0.98
CTSD-209ENST00000637158 LINC01553A4QN01 128 aa21.14■□□□□ 0.97
CTSD-209ENST00000637158 RSPH10B2B2RC85 870 aa21.14■□□□□ 0.97
CTSD-209ENST00000637158 RSPH10BP0C881 870 aa21.14■□□□□ 0.97
CTSD-209ENST00000637158 TMCO2Q7Z6W1 182 aaPredicted RBP21.14■□□□□ 0.97
CTSD-209ENST00000637158 SERINC5Q86VE9 423 aa21.14■□□□□ 0.97
CTSD-209ENST00000637158 GDPD5Q8WTR4 605 aa21.14■□□□□ 0.97
CTSD-209ENST00000637158 ERICH2A1L162 156 aa21.13■□□□□ 0.97
CTSD-209ENST00000637158 C17orf102A2RUQ5 167 aa21.13■□□□□ 0.97
CTSD-209ENST00000637158 H3BRB1 525 aa21.13■□□□□ 0.97
CTSD-209ENST00000637158 CAND2O75155 1236 aa21.13■□□□□ 0.97
CTSD-209ENST00000637158 STAM2O75886 525 aa21.13■□□□□ 0.97
CTSD-209ENST00000637158 HOXA13P31271 388 aaPredicted RBP21.13■□□□□ 0.97
CTSD-209ENST00000637158 THPOP40225 353 aa21.13■□□□□ 0.97
CTSD-209ENST00000637158 GNPTABQ3T906 1256 aa21.13■□□□□ 0.97
CTSD-209ENST00000637158 FAM122AQ96E09 287 aa21.13■□□□□ 0.97
CTSD-209ENST00000637158 C16orf70Q9BSU1 422 aa21.13■□□□□ 0.97
CTSD-209ENST00000637158 TUT1Q9H6E5 874 aaKnown RBP21.13■□□□□ 0.97
CTSD-209ENST00000637158 ARIH1Q9Y4X5 557 aaPredicted RBP21.13■□□□□ 0.97
CTSD-209ENST00000637158 NOP56O00567 594 aaKnown RBP21.12■□□□□ 0.97
CTSD-209ENST00000637158 PPP1R11O60927 126 aaPredicted RBP21.12■□□□□ 0.97
CTSD-209ENST00000637158 IGHDP01880 384 aa21.12■□□□□ 0.97
CTSD-209ENST00000637158 GNAT1P11488 350 aa21.12■□□□□ 0.97
CTSD-209ENST00000637158 UBA1P22314 1058 aaKnown RBP21.12■□□□□ 0.97
CTSD-209ENST00000637158 PLA2G5P39877 138 aa21.12■□□□□ 0.97
CTSD-209ENST00000637158 ZNF200P98182 395 aaPredicted RBP21.12■□□□□ 0.97
CTSD-209ENST00000637158 SPRED2Q7Z698 418 aa21.12■□□□□ 0.97
CTSD-209ENST00000637158 HOMER1Q86YM7 354 aa21.12■□□□□ 0.97
CTSD-209ENST00000637158 ATP6V0A1Q93050 837 aa21.12■□□□□ 0.97
CTSD-209ENST00000637158 SAMD11Q96NU1 681 aa21.12■□□□□ 0.97
CTSD-209ENST00000637158 USP26Q9BXU7 913 aa21.12■□□□□ 0.97
CTSD-209ENST00000637158 RIOX1Q9H6W3 641 aa21.12■□□□□ 0.97
CTSD-209ENST00000637158 MTUS1Q9ULD2 1270 aa21.12■□□□□ 0.97
CTSD-209ENST00000637158 U3KPZ7 1027 aaPredicted RBP21.12■□□□□ 0.97
CTSD-209ENST00000637158 PNMA6FA0A0J9YX94 578 aa21.11■□□□□ 0.97
CTSD-209ENST00000637158 SP2Q02086 613 aa21.11■□□□□ 0.97
CTSD-209ENST00000637158 NEDD9Q14511 834 aa21.11■□□□□ 0.97
CTSD-209ENST00000637158 MBTPS1Q14703 1052 aa21.11■□□□□ 0.97
CTSD-209ENST00000637158 GRM4Q14833 912 aa21.11■□□□□ 0.97
CTSD-209ENST00000637158 SART3Q15020 963 aaKnown RBP21.11■□□□□ 0.97
CTSD-209ENST00000637158 TCTN1Q2MV58 587 aa21.11■□□□□ 0.97
CTSD-209ENST00000637158 FAM117BQ6P1L5 589 aa21.11■□□□□ 0.97
CTSD-209ENST00000637158 FCHSD1Q86WN1 690 aa21.11■□□□□ 0.97
CTSD-209ENST00000637158 DBF4BQ8NFT6 615 aa21.11■□□□□ 0.97
CTSD-209ENST00000637158 WNT8BQ93098 351 aa21.11■□□□□ 0.97
CTSD-209ENST00000637158 RAPGEFL1Q9UHV5 662 aa21.11■□□□□ 0.97
CTSD-209ENST00000637158 PTPRSQ13332 1948 aa21.1■□□□□ 0.97
CTSD-209ENST00000637158 HOXC8P31273 242 aa21.1■□□□□ 0.97
CTSD-209ENST00000637158 HTRA4P83105 476 aaPredicted RBP21.1■□□□□ 0.97
CTSD-209ENST00000637158 PLEKHG4Q58EX7 1191 aa21.1■□□□□ 0.97
CTSD-209ENST00000637158 CYB5R4Q7L1T6 521 aa21.1■□□□□ 0.97
CTSD-209ENST00000637158 MYOCDQ8IZQ8 938 aa21.1■□□□□ 0.97
CTSD-209ENST00000637158 RUFY2Q8WXA3 655 aa21.1■□□□□ 0.97
CTSD-209ENST00000637158 SEPT8Q92599 483 aa21.1■□□□□ 0.97
CTSD-209ENST00000637158 PIGSQ96S52 555 aa21.1■□□□□ 0.97
CTSD-209ENST00000637158 MYH7BA7E2Y1 1941 aa21.1■□□□□ 0.97
CTSD-209ENST00000637158 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.09■□□□□ 0.97
CTSD-209ENST00000637158 IFIT3O14879 490 aaKnown RBP21.09■□□□□ 0.97
CTSD-209ENST00000637158 SORBS3O60504 671 aa21.09■□□□□ 0.97
CTSD-209ENST00000637158 ICAM3P32942 547 aa21.09■□□□□ 0.97
CTSD-209ENST00000637158 PTPROQ16827 1216 aa21.09■□□□□ 0.97
CTSD-209ENST00000637158 TMEM31Q5JXX7 168 aa21.09■□□□□ 0.97
CTSD-209ENST00000637158 METTL7BQ6UX53 244 aa21.09■□□□□ 0.97
CTSD-209ENST00000637158 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.09■□□□□ 0.971e-9■■■□□ 19.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms