RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 TGFB3P10600 412 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 GCFC2P16383 781 aaKnown RBP18.18■□□□□ 0.5
CLN6-216ENST00000636876 TNFAIP2Q03169 654 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 RESTQ13127 1097 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 MTMR1Q13613 665 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 TTLL4Q14679 1199 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 KCNV1Q6PIU1 500 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 BRAPQ7Z569 592 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 PLA2G4DQ86XP0 818 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 CDHR1Q96JP9 859 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 MBOAT7Q96N66 472 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 RNF208Q9H0X6 261 aa18.18■□□□□ 0.5
CLN6-216ENST00000636876 PAK6Q9NQU5 681 aaPredicted RBP18.18■□□□□ 0.5
CLN6-216ENST00000636876 DDX20Q9UHI6 824 aaKnown RBP18.18■□□□□ 0.5
CLN6-216ENST00000636876 NOL7Q9UMY1 257 aaKnown RBP18.18■□□□□ 0.5
CLN6-216ENST00000636876 MSCO60682 206 aa18.17■□□□□ 0.5
CLN6-216ENST00000636876 TXNP10599 105 aaKnown RBP18.17■□□□□ 0.5
CLN6-216ENST00000636876 SMPD1P17405 629 aa18.17■□□□□ 0.5
CLN6-216ENST00000636876 TRAPPC10P48553 1259 aa18.17■□□□□ 0.5
CLN6-216ENST00000636876 SETQ01105 290 aaPredicted RBP18.17■□□□□ 0.5
CLN6-216ENST00000636876 DUSP28Q4G0W2 176 aa18.17■□□□□ 0.5
CLN6-216ENST00000636876 PRR16Q569H4 304 aa18.17■□□□□ 0.5
CLN6-216ENST00000636876 TMEM63BQ5T3F8 832 aa18.17■□□□□ 0.5
CLN6-216ENST00000636876 PPP4R3AQ6IN85 833 aa18.17■□□□□ 0.5
CLN6-216ENST00000636876 LENG9Q96B70 501 aa18.17■□□□□ 0.5
CLN6-216ENST00000636876 WNT7AO00755 349 aa18.16■□□□□ 0.5
CLN6-216ENST00000636876 NKRFO15226 690 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLN6-216ENST00000636876 MAFGO15525 162 aa18.16■□□□□ 0.5
CLN6-216ENST00000636876 CCNT1O60563 726 aaKnown RBP18.16■□□□□ 0.5
CLN6-216ENST00000636876 DUSP11O75319 330 aaKnown RBP18.16■□□□□ 0.5
CLN6-216ENST00000636876 ZSCAN22P10073 491 aaPredicted RBP18.16■□□□□ 0.5
CLN6-216ENST00000636876 ARP10275 920 aa18.16■□□□□ 0.5
CLN6-216ENST00000636876 PKP1Q13835 747 aa18.16■□□□□ 0.5
CLN6-216ENST00000636876 LY6KQ17RY6 165 aa18.16■□□□□ 0.5
CLN6-216ENST00000636876 Q4G0T1 1027 aa18.16■□□□□ 0.5
CLN6-216ENST00000636876 GJC2Q5T442 439 aaPredicted RBP18.16■□□□□ 0.5
CLN6-216ENST00000636876 ANO1Q5XXA6 986 aa18.16■□□□□ 0.5
CLN6-216ENST00000636876 LENG1Q96BZ8 264 aaPredicted RBP18.16■□□□□ 0.5
CLN6-216ENST00000636876 KCNH7Q9NS40 1196 aa18.16■□□□□ 0.5
CLN6-216ENST00000636876 DDX25Q9UHL0 483 aaKnown RBP18.16■□□□□ 0.5
CLN6-216ENST00000636876 DDX41Q9UJV9 622 aaKnown RBP18.16■□□□□ 0.5
CLN6-216ENST00000636876 GNEQ9Y223 722 aaKnown RBP18.16■□□□□ 0.5
CLN6-216ENST00000636876 RARBP10826 455 aa18.15■□□□□ 0.5
CLN6-216ENST00000636876 ATP2B1P20020 1258 aa18.15■□□□□ 0.5
CLN6-216ENST00000636876 UBA1P22314 1058 aaKnown RBP18.15■□□□□ 0.5
CLN6-216ENST00000636876 DDIT3P35638 169 aa18.15■□□□□ 0.5
CLN6-216ENST00000636876 TOB1P50616 345 aaPredicted RBP18.15■□□□□ 0.5
CLN6-216ENST00000636876 SP2Q02086 613 aa18.15■□□□□ 0.5
CLN6-216ENST00000636876 TTC38Q5R3I4 469 aa18.15■□□□□ 0.5
CLN6-216ENST00000636876 LHX8Q68G74 356 aa18.15■□□□□ 0.5
CLN6-216ENST00000636876 COPS5Q92905 334 aa18.15■□□□□ 0.5
CLN6-216ENST00000636876 SENP7Q9BQF6 1050 aa18.15■□□□□ 0.5
CLN6-216ENST00000636876 ZSCAN16Q9H4T2 348 aaPredicted RBP18.15■□□□□ 0.5
CLN6-216ENST00000636876 AGO4Q9HCK5 861 aaKnown RBP18.15■□□□□ 0.5
CLN6-216ENST00000636876 SLC37A4O43826 429 aa18.14■□□□□ 0.49
CLN6-216ENST00000636876 ATP9AO75110 1047 aa18.14■□□□□ 0.49
CLN6-216ENST00000636876 GJB1P08034 283 aa18.14■□□□□ 0.49
CLN6-216ENST00000636876 KCNA2P16389 499 aa18.14■□□□□ 0.49
CLN6-216ENST00000636876 PTGS1P23219 599 aa18.14■□□□□ 0.49
CLN6-216ENST00000636876 RILPL1Q5EBL4 403 aa18.14■□□□□ 0.49
CLN6-216ENST00000636876 FOXD4L5Q5VV16 416 aaPredicted RBP18.14■□□□□ 0.49
CLN6-216ENST00000636876 MYSM1Q5VVJ2 828 aa18.14■□□□□ 0.49
CLN6-216ENST00000636876 TLK2Q86UE8 772 aa18.14■□□□□ 0.49
CLN6-216ENST00000636876 FOXD4L4Q8WXT5 416 aaPredicted RBP18.14■□□□□ 0.49
CLN6-216ENST00000636876 DEFB118Q96PH6 123 aa18.14■□□□□ 0.49
CLN6-216ENST00000636876 Q9Y3F1 56 aa18.14■□□□□ 0.49
CLN6-216ENST00000636876 MSH4O15457 936 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 DYNC1LI2O43237 492 aaPredicted RBP18.13■□□□□ 0.49
CLN6-216ENST00000636876 BRD1O95696 1058 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 GGPS1O95749 300 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 F13A1P00488 732 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 GH1P01241 217 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 ARHGAP1Q07960 439 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 ORC2Q13416 577 aaPredicted RBP18.13■□□□□ 0.49
CLN6-216ENST00000636876 NEDD9Q14511 834 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 NBR1Q14596 966 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 CELF3Q5SZQ8 465 aaKnown RBP18.13■□□□□ 0.49
CLN6-216ENST00000636876 DHX37Q8IY37 1157 aaKnown RBP18.13■□□□□ 0.49
CLN6-216ENST00000636876 GIMAP8Q8ND71 665 aaPredicted RBP18.13■□□□□ 0.49
CLN6-216ENST00000636876 OR6J1Q8NGC5 347 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 ETNPPLQ8TBG4 499 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 IPO9Q96P70 1041 aaKnown RBP18.13■□□□□ 0.49
CLN6-216ENST00000636876 ZNF577Q9BSK1 485 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 TMEM106CQ9BVX2 250 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 AP5M1Q9H0R1 490 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 UPF3AQ9H1J1 476 aaKnown RBP18.13■□□□□ 0.49
CLN6-216ENST00000636876 XPNPEP3Q9NQH7 507 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 PKD2L1Q9P0L9 805 aa18.13■□□□□ 0.49
CLN6-216ENST00000636876 FRMPD3Q5JV73 1810 aa18.12■□□□□ 0.49
CLN6-216ENST00000636876 IPO5O00410 1097 aaKnown RBP18.12■□□□□ 0.49
CLN6-216ENST00000636876 NEMFO60524 1076 aa18.12■□□□□ 0.49
CLN6-216ENST00000636876 MCM7P33993 719 aa18.12■□□□□ 0.49
CLN6-216ENST00000636876 GJA9P57773 515 aa18.12■□□□□ 0.49
CLN6-216ENST00000636876 ITGB3BPQ13352 177 aaPredicted RBP18.12■□□□□ 0.49
CLN6-216ENST00000636876 ZNF174Q15697 407 aa18.12■□□□□ 0.49
CLN6-216ENST00000636876 POTEDQ86YR6 584 aa18.12■□□□□ 0.49
CLN6-216ENST00000636876 EMID1Q96A84 441 aaPredicted RBP18.12■□□□□ 0.49
CLN6-216ENST00000636876 UIMC1Q96RL1 719 aa18.12■□□□□ 0.49
CLN6-216ENST00000636876 BCAS3Q9H6U6 928 aa18.12■□□□□ 0.49
CLN6-216ENST00000636876 KCNMB3Q9NPA1 279 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms