RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 ADCY7P51828 1080 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 FCGRTP55899 365 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 LACTBP83111 547 aaPredicted RBP7.7□□□□□ -1.18
UPF3B-205ENST00000636792 SP3Q02447 781 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 ORC2Q13416 577 aaPredicted RBP7.7□□□□□ -1.18
UPF3B-205ENST00000636792 GRB14Q14449 540 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 KCTD2Q14681 263 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 XRRA1Q6P2D8 792 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 HEATR3Q7Z4Q2 680 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 RAB11FIP4Q86YS3 637 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 CCAR1Q8IX12 1150 aaKnown RBP7.7□□□□□ -1.18
UPF3B-205ENST00000636792 TRMT44Q8IYL2 757 aaKnown RBP7.7□□□□□ -1.18
UPF3B-205ENST00000636792 ANKRD13CQ8N6S4 541 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 FBXO18Q8NFZ0 1043 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 HLA-CQ95604 372 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 C8orf76Q96K31 380 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 TRERF1Q96PN7 1200 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 NAP1L4Q99733 375 aaKnown RBP7.7□□□□□ -1.18
UPF3B-205ENST00000636792 PAGR1Q9BTK6 254 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 PHF20Q9BVI0 1012 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 RAVER2Q9HCJ3 691 aaKnown RBP7.7□□□□□ -1.18
UPF3B-205ENST00000636792 TXNRD2Q9NNW7 524 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 RIC8AQ9NPQ8 531 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 RTN4Q9NQC3 1192 aaKnown RBP7.7□□□□□ -1.18
UPF3B-205ENST00000636792 RNF146Q9NTX7 359 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 RNF186Q9NXI6 227 aa7.7□□□□□ -1.18
UPF3B-205ENST00000636792 SLC15A5A6NIM6 579 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 JAK2O60674 1132 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 PPP1R11O60927 126 aaPredicted RBP7.69□□□□□ -1.18
UPF3B-205ENST00000636792 FKTNO75072 461 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 STAM2O75886 525 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 HOXC6P09630 235 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 FCER1AP12319 257 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 XRCC5P13010 732 aaKnown RBP7.69□□□□□ -1.18
UPF3B-205ENST00000636792 ALAS1P13196 640 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 ERCC3P19447 782 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 HOXD10P28358 340 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 CLK2P49760 499 aaKnown RBP7.69□□□□□ -1.18
UPF3B-205ENST00000636792 NLRP5P59047 1200 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 PLS1Q14651 629 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 SUZ12Q15022 739 aaKnown RBP7.69□□□□□ -1.18
UPF3B-205ENST00000636792 USH1GQ495M9 461 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 CCDC174Q6PII3 467 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 MOXD1Q6UVY6 613 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 KRT25Q7Z3Z0 450 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 BRAPQ7Z569 592 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 RETREG3Q86VR2 466 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 NCAPG2Q86XI2 1143 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 CPXCR1Q8N123 301 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 REXO1Q8N1G1 1221 aaKnown RBP7.69□□□□□ -1.18
UPF3B-205ENST00000636792 CCDC82Q8N4S0 544 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 COA7Q96BR5 231 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 ZIC5Q96T25 663 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 FOXP1Q9H334 677 aaPredicted RBP7.69□□□□□ -1.18
UPF3B-205ENST00000636792 ZSCAN16Q9H4T2 348 aaPredicted RBP7.69□□□□□ -1.18
UPF3B-205ENST00000636792 PSTPIP2Q9H939 334 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 VAT1LQ9HCJ6 419 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 CYP39A1Q9NYL5 469 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 ADD3Q9UEY8 706 aaKnown RBP7.69□□□□□ -1.18
UPF3B-205ENST00000636792 PCDHA4Q9UN74 947 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 DOCK3Q8IZD9 2030 aa7.69□□□□□ -1.18
UPF3B-205ENST00000636792 DNAJC25-GNG10A0A024R161 153 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 SMCO2A6NFE2 343 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 SPDYE3A6NKU9 549 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 H3BQV1 296 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 GCOM1H8Y6P7 765 aaPredicted RBP7.68□□□□□ -1.18
UPF3B-205ENST00000636792 GPR25O00155 361 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 OPLAHO14841 1288 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 TRPA1O75762 1119 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 POLR2MP0CAP2 368 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 GCFC2P16383 781 aaKnown RBP7.68□□□□□ -1.18
UPF3B-205ENST00000636792 U2AF2P26368 475 aaKnown RBP eCLIP7.68□□□□□ -1.18
UPF3B-205ENST00000636792 KRT2P35908 639 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 RGS2P41220 211 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 TRAPPC10P48553 1259 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 NUCB2P80303 420 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 HTRA3P83110 453 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 LARP1BQ659C4 914 aaKnown RBP7.68□□□□□ -1.18
UPF3B-205ENST00000636792 PTCRAQ6ISU1 281 aaPredicted RBP7.68□□□□□ -1.18
UPF3B-205ENST00000636792 RNF207Q6ZRF8 634 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 GPR142Q7Z601 462 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 PLEKHH3Q7Z736 793 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 BLIDQ8IZY5 108 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 CMTR1Q8N1G2 835 aaKnown RBP7.68□□□□□ -1.18
UPF3B-205ENST00000636792 ANKRD35Q8N283 1001 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 CLEC4DQ8WXI8 215 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 GPKOWQ92917 476 aaPredicted RBP eCLIP7.68□□□□□ -1.18
UPF3B-205ENST00000636792 AGBL1Q96MI9 1066 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 IPO9Q96P70 1041 aaKnown RBP7.68□□□□□ -1.18
UPF3B-205ENST00000636792 IWS1Q96ST2 819 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 MMP19Q99542 508 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 APBA2Q99767 749 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 CPVLQ9H3G5 476 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 A1CFQ9NQ94 594 aaKnown RBP7.68□□□□□ -1.18
UPF3B-205ENST00000636792 VPS54Q9P1Q0 977 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 NRBP1Q9UHY1 535 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 CPA4Q9UI42 421 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 ATP6V1DQ9Y5K8 247 aa7.68□□□□□ -1.18
UPF3B-205ENST00000636792 ASB14A6NK59 587 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 M0R2N6 131 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms