RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 ALDH8A1Q9H2A2 487 aaPredicted RBP21.21■□□□□ 0.99
CLN6-214ENST00000636314 PPP4R2Q9NY27 417 aa21.21■□□□□ 0.99
CLN6-214ENST00000636314 MRVI1Q9Y6F6 885 aa21.21■□□□□ 0.99
CLN6-214ENST00000636314 SCN10AQ9Y5Y9 1956 aa21.2■□□□□ 0.98
CLN6-214ENST00000636314 GH1P01241 217 aa21.2■□□□□ 0.98
CLN6-214ENST00000636314 CENPBP07199 599 aaPredicted RBP21.2■□□□□ 0.98
CLN6-214ENST00000636314 EXOSC10Q01780 885 aaKnown RBP21.2■□□□□ 0.98
CLN6-214ENST00000636314 PGM5Q15124 567 aa21.2■□□□□ 0.98
CLN6-214ENST00000636314 LY6KQ17RY6 165 aa21.2■□□□□ 0.98
CLN6-214ENST00000636314 TMTC3Q6ZXV5 915 aa21.2■□□□□ 0.98
CLN6-214ENST00000636314 FANCBQ8NB91 859 aa21.2■□□□□ 0.98
CLN6-214ENST00000636314 MTG1Q9BT17 334 aaPredicted RBP21.2■□□□□ 0.98
CLN6-214ENST00000636314 TRMT13Q9NUP7 481 aaKnown RBP21.2■□□□□ 0.98
CLN6-214ENST00000636314 PCDHA11Q9Y5I1 949 aa21.2■□□□□ 0.98
CLN6-214ENST00000636314 TRANK1O15050 2925 aa21.2■□□□□ 0.98
CLN6-214ENST00000636314 TANC1Q9C0D5 1861 aa21.2■□□□□ 0.98
CLN6-214ENST00000636314 A6NJR5 290 aa21.19■□□□□ 0.98
CLN6-214ENST00000636314 KPNA6O60684 536 aa21.19■□□□□ 0.98
CLN6-214ENST00000636314 CYP2C9P11712 490 aa21.19■□□□□ 0.98
CLN6-214ENST00000636314 ATP2A2P16615 1042 aaKnown RBP21.19■□□□□ 0.98
CLN6-214ENST00000636314 CCND2P30279 289 aa21.19■□□□□ 0.98
CLN6-214ENST00000636314 HSPA4P34932 840 aa21.19■□□□□ 0.98
CLN6-214ENST00000636314 FGD1P98174 961 aa21.19■□□□□ 0.98
CLN6-214ENST00000636314 ERICH6BQ5W0A0 696 aa21.19■□□□□ 0.98
CLN6-214ENST00000636314 DEFB128Q7Z7B8 93 aa21.19■□□□□ 0.98
CLN6-214ENST00000636314 IL31RAQ8NI17 732 aa21.19■□□□□ 0.98
CLN6-214ENST00000636314 CUL5Q93034 780 aa21.19■□□□□ 0.98
CLN6-214ENST00000636314 RBM28Q9NW13 759 aaKnown RBP21.19■□□□□ 0.98
CLN6-214ENST00000636314 RAPGEFL1Q9UHV5 662 aa21.19■□□□□ 0.98
CLN6-214ENST00000636314 ZBTB43O43298 467 aa21.18■□□□□ 0.98
CLN6-214ENST00000636314 SUPT20HL2P0C7V6 817 aa21.18■□□□□ 0.98
CLN6-214ENST00000636314 ARHGAP1Q07960 439 aa21.18■□□□□ 0.98
CLN6-214ENST00000636314 FAM47CQ5HY64 1035 aa21.18■□□□□ 0.98
CLN6-214ENST00000636314 CCDC82Q8N4S0 544 aa21.18■□□□□ 0.98
CLN6-214ENST00000636314 SMARCC2Q8TAQ2 1214 aa21.18■□□□□ 0.98
CLN6-214ENST00000636314 KCNB2Q92953 911 aa21.18■□□□□ 0.98
CLN6-214ENST00000636314 JAKMIP1Q96N16 626 aaKnown RBP21.18■□□□□ 0.98
CLN6-214ENST00000636314 MYH7BA7E2Y1 1941 aa21.17■□□□□ 0.98
CLN6-214ENST00000636314 SKIV2LQ15477 1246 aaKnown RBP21.17■□□□□ 0.98
CLN6-214ENST00000636314 RTN1Q16799 776 aa21.17■□□□□ 0.98
CLN6-214ENST00000636314 VSIG10LQ86VR7 867 aa21.17■□□□□ 0.98
CLN6-214ENST00000636314 AFG1LQ8WV93 481 aa21.17■□□□□ 0.98
CLN6-214ENST00000636314 VWCEQ96DN2 955 aa21.17■□□□□ 0.98
CLN6-214ENST00000636314 DDX41Q9UJV9 622 aaKnown RBP21.17■□□□□ 0.98
CLN6-214ENST00000636314 BRPF3Q9ULD4 1205 aa21.17■□□□□ 0.98
CLN6-214ENST00000636314 SNX14Q9Y5W7 946 aa21.17■□□□□ 0.98
CLN6-214ENST00000636314 FRMPD4Q14CM0 1322 aa21.17■□□□□ 0.98
CLN6-214ENST00000636314 TRIP12Q14669 1992 aaPredicted RBP21.17■□□□□ 0.98
CLN6-214ENST00000636314 NCOR1O75376 2440 aa21.16■□□□□ 0.98
CLN6-214ENST00000636314 CNTNAP5Q8WYK1 1306 aa21.16■□□□□ 0.98
CLN6-214ENST00000636314 KLF18A0A0U1RQI7 1052 aa21.16■□□□□ 0.98
CLN6-214ENST00000636314 hCG_1642624A0A1W2PR95 340 aa21.16■□□□□ 0.98
CLN6-214ENST00000636314 GOLGA8AA7E2F4 631 aa21.16■□□□□ 0.98
CLN6-214ENST00000636314 GOLGA8BA8MQT2 603 aa21.16■□□□□ 0.98
CLN6-214ENST00000636314 PFKMP08237 780 aa21.16■□□□□ 0.98
CLN6-214ENST00000636314 MMP3P08254 477 aa21.16■□□□□ 0.98
CLN6-214ENST00000636314 KCNV1Q6PIU1 500 aa21.16■□□□□ 0.98
CLN6-214ENST00000636314 BLOC1S2Q6QNY1 142 aa21.16■□□□□ 0.98
CLN6-214ENST00000636314 NAP1L2Q9ULW6 460 aaPredicted RBP21.16■□□□□ 0.98
CLN6-214ENST00000636314 XIRP2A4UGR9 3374 aa21.16■□□□□ 0.98
CLN6-214ENST00000636314 RGS20O76081 388 aa21.15■□□□□ 0.98
CLN6-214ENST00000636314 ACTN1P12814 892 aa21.15■□□□□ 0.98
CLN6-214ENST00000636314 CPA1P15085 419 aa21.15■□□□□ 0.98
CLN6-214ENST00000636314 USP17L6PQ6QN14 398 aa21.15■□□□□ 0.98
CLN6-214ENST00000636314 PPP1R13LQ8WUF5 828 aa21.15■□□□□ 0.98
CLN6-214ENST00000636314 NECAB3Q96P71 396 aaPredicted RBP21.15■□□□□ 0.98
CLN6-214ENST00000636314 CERS4Q9HA82 394 aa21.15■□□□□ 0.98
CLN6-214ENST00000636314 BDP1A6H8Y1 2624 aa21.15■□□□□ 0.98
CLN6-214ENST00000636314 RFXAPO00287 272 aa21.14■□□□□ 0.97
CLN6-214ENST00000636314 PIK3CDO00329 1044 aa21.14■□□□□ 0.97
CLN6-214ENST00000636314 CA3P07451 260 aa21.14■□□□□ 0.97
CLN6-214ENST00000636314 TFF2Q03403 129 aa21.14■□□□□ 0.97
CLN6-214ENST00000636314 LAMC2Q13753 1193 aa21.14■□□□□ 0.97
CLN6-214ENST00000636314 NBPF20Q3BBV1 942 aa21.14■□□□□ 0.97
CLN6-214ENST00000636314 GNPTABQ3T906 1256 aa21.14■□□□□ 0.97
CLN6-214ENST00000636314 HEATR3Q7Z4Q2 680 aa21.14■□□□□ 0.97
CLN6-214ENST00000636314 DHX37Q8IY37 1157 aaKnown RBP21.14■□□□□ 0.97
CLN6-214ENST00000636314 EMID1Q96A84 441 aaPredicted RBP21.14■□□□□ 0.97
CLN6-214ENST00000636314 ZFP91Q96JP5 570 aaPredicted RBP21.14■□□□□ 0.97
CLN6-214ENST00000636314 PTPRSQ13332 1948 aa21.14■□□□□ 0.97
CLN6-214ENST00000636314 PRRC2BQ5JSZ5 2229 aaKnown RBP21.13■□□□□ 0.97
CLN6-214ENST00000636314 MEIS2O14770 477 aa21.13■□□□□ 0.97
CLN6-214ENST00000636314 GTPBP6O43824 516 aaPredicted RBP21.13■□□□□ 0.97
CLN6-214ENST00000636314 STAM2O75886 525 aa21.13■□□□□ 0.97
CLN6-214ENST00000636314 CASTP20810 708 aaKnown RBP21.13■□□□□ 0.97
CLN6-214ENST00000636314 RCAN1P53805 252 aa21.13■□□□□ 0.97
CLN6-214ENST00000636314 CHMP4BP1P59074 171 aa21.13■□□□□ 0.97
CLN6-214ENST00000636314 DGKDQ16760 1214 aa21.13■□□□□ 0.97
CLN6-214ENST00000636314 NFRKBQ6P4R8 1299 aa21.13■□□□□ 0.97
CLN6-214ENST00000636314 Q6ZUG5 572 aa21.13■□□□□ 0.97
CLN6-214ENST00000636314 PPTC7Q8NI37 304 aa21.13■□□□□ 0.97
CLN6-214ENST00000636314 GPKOWQ92917 476 aaPredicted RBP eCLIP21.13■□□□□ 0.97
CLN6-214ENST00000636314 PSTPIP2Q9H939 334 aa21.13■□□□□ 0.97
CLN6-214ENST00000636314 TET1Q8NFU7 2136 aa21.13■□□□□ 0.97
CLN6-214ENST00000636314 EPB41L2O43491 1005 aaKnown RBP21.12■□□□□ 0.97
CLN6-214ENST00000636314 GGPS1O95749 300 aa21.12■□□□□ 0.97
CLN6-214ENST00000636314 TGFB3P10600 412 aa21.12■□□□□ 0.97
CLN6-214ENST00000636314 UBA1P22314 1058 aaKnown RBP21.12■□□□□ 0.97
CLN6-214ENST00000636314 PSMA5P28066 241 aa21.12■□□□□ 0.97
CLN6-214ENST00000636314 RFC2P35250 354 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms