RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 GRIN2CQ14957 1233 aa17.95■□□□□ 0.46
LINC00339-209ENST00000635450 PGM5Q15124 567 aa17.95■□□□□ 0.46
LINC00339-209ENST00000635450 RUFY3Q7L099 469 aa17.95■□□□□ 0.46
LINC00339-209ENST00000635450 FCHSD1Q86WN1 690 aa17.95■□□□□ 0.46
LINC00339-209ENST00000635450 SRBD1Q8N5C6 995 aaKnown RBP17.95■□□□□ 0.46
LINC00339-209ENST00000635450 SAMD3Q8N6K7 520 aa17.95■□□□□ 0.46
LINC00339-209ENST00000635450 HERVK_113Q902F9 699 aa17.95■□□□□ 0.46
LINC00339-209ENST00000635450 BRF1Q92994 677 aa17.95■□□□□ 0.46
LINC00339-209ENST00000635450 MAP3K20Q9NYL2 800 aaKnown RBP17.95■□□□□ 0.46
LINC00339-209ENST00000635450 BRPF3Q9ULD4 1205 aa17.95■□□□□ 0.46
LINC00339-209ENST00000635450 CYP46A1Q9Y6A2 500 aa17.95■□□□□ 0.46
LINC00339-209ENST00000635450 MRVI1Q9Y6F6 885 aa17.95■□□□□ 0.46
LINC00339-209ENST00000635450 RCAN1P53805 252 aa17.94■□□□□ 0.46
LINC00339-209ENST00000635450 APOBRQ0VD83 1088 aa17.94■□□□□ 0.46
LINC00339-209ENST00000635450 NFRKBQ6P4R8 1299 aa17.94■□□□□ 0.46
LINC00339-209ENST00000635450 TMTC3Q6ZXV5 915 aa17.94■□□□□ 0.46
LINC00339-209ENST00000635450 CCDC82Q8N4S0 544 aa17.94■□□□□ 0.46
LINC00339-209ENST00000635450 SEZ6LQ9BYH1 1024 aa17.94■□□□□ 0.46
LINC00339-209ENST00000635450 TM6SF1Q9BZW5 370 aa17.94■□□□□ 0.46
LINC00339-209ENST00000635450 BCAS3Q9H6U6 928 aa17.94■□□□□ 0.46
LINC00339-209ENST00000635450 ZSWIM6Q9HCJ5 1215 aa17.94■□□□□ 0.46
LINC00339-209ENST00000635450 EIF3JO75822 258 aaKnown RBP17.93■□□□□ 0.46
LINC00339-209ENST00000635450 SP2Q02086 613 aa17.93■□□□□ 0.46
LINC00339-209ENST00000635450 BRDTQ58F21 947 aaPredicted RBP17.93■□□□□ 0.46
LINC00339-209ENST00000635450 GDF6Q6KF10 455 aaPredicted RBP17.93■□□□□ 0.46
LINC00339-209ENST00000635450 DEFB128Q7Z7B8 93 aa17.93■□□□□ 0.46
LINC00339-209ENST00000635450 FBXL16Q8N461 479 aa17.93■□□□□ 0.46
LINC00339-209ENST00000635450 TIFAQ96CG3 184 aa17.93■□□□□ 0.46
LINC00339-209ENST00000635450 YBX2Q9Y2T7 364 aaKnown RBP17.93■□□□□ 0.46
LINC00339-209ENST00000635450 FRMPD4Q14CM0 1322 aa17.93■□□□□ 0.46
LINC00339-209ENST00000635450 CCDC196A0A1B0GTZ2 297 aa17.92■□□□□ 0.46
LINC00339-209ENST00000635450 hCG_1642624A0A1W2PR95 340 aa17.92■□□□□ 0.46
LINC00339-209ENST00000635450 GCOM1H8Y6P7 765 aaPredicted RBP17.92■□□□□ 0.46
LINC00339-209ENST00000635450 POLR2MP0CAP2 368 aa17.92■□□□□ 0.46
LINC00339-209ENST00000635450 UBA1P22314 1058 aaKnown RBP17.92■□□□□ 0.46
LINC00339-209ENST00000635450 METAP2P50579 478 aaKnown RBP eCLIP17.92■□□□□ 0.46
LINC00339-209ENST00000635450 VSIG10LQ86VR7 867 aa17.92■□□□□ 0.46
LINC00339-209ENST00000635450 MAFAQ8NHW3 353 aaPredicted RBP17.92■□□□□ 0.46
LINC00339-209ENST00000635450 DHX38Q92620 1227 aaKnown RBP17.92■□□□□ 0.46
LINC00339-209ENST00000635450 ZNF576Q9H609 170 aa17.92■□□□□ 0.46
LINC00339-209ENST00000635450 TELO2Q9Y4R8 837 aa17.92■□□□□ 0.46
LINC00339-209ENST00000635450 REV3LO60673 3130 aa17.92■□□□□ 0.46
LINC00339-209ENST00000635450 TMEM265A0A087WTH1 108 aa17.91■□□□□ 0.46
LINC00339-209ENST00000635450 KPNA6O60684 536 aa17.91■□□□□ 0.46
LINC00339-209ENST00000635450 FGBP02675 491 aa17.91■□□□□ 0.46
LINC00339-209ENST00000635450 MYOGP15173 224 aa17.91■□□□□ 0.46
LINC00339-209ENST00000635450 FOSL2P15408 326 aa17.91■□□□□ 0.46
LINC00339-209ENST00000635450 RABGGTBP53611 331 aa17.91■□□□□ 0.46
LINC00339-209ENST00000635450 ANAPC15P60006 121 aa17.91■□□□□ 0.46
LINC00339-209ENST00000635450 MRPS9P82933 396 aaKnown RBP17.91■□□□□ 0.46
LINC00339-209ENST00000635450 HIC1Q14526 733 aa17.91■□□□□ 0.46
LINC00339-209ENST00000635450 CUL5Q93034 780 aa17.91■□□□□ 0.46
LINC00339-209ENST00000635450 WNT8BQ93098 351 aa17.91■□□□□ 0.46
LINC00339-209ENST00000635450 EMID1Q96A84 441 aaPredicted RBP17.91■□□□□ 0.46
LINC00339-209ENST00000635450 AGXT2Q9BYV1 514 aa17.91■□□□□ 0.46
LINC00339-209ENST00000635450 NKX2-4Q9H2Z4 354 aa17.91■□□□□ 0.46
LINC00339-209ENST00000635450 SPTBN5Q9NRC6 3674 aaKnown RBP17.9■□□□□ 0.46
LINC00339-209ENST00000635450 GGPS1O95749 300 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 F2P00734 622 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 SUPT20HL2P0C7V6 817 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 HOXD8P13378 290 aaPredicted RBP17.9■□□□□ 0.46
LINC00339-209ENST00000635450 CCND2P30279 289 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 PSEN2P49810 448 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 SEMA3FQ13275 785 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 PTGISQ16647 500 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 HSDL1Q3SXM5 330 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 MYSM1Q5VVJ2 828 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 USP17L6PQ6QN14 398 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 USP38Q8NB14 1042 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 PPTC7Q8NI37 304 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 ALG1Q9BT22 464 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 UPF3BQ9BZI7 483 aaKnown RBP17.9■□□□□ 0.46
LINC00339-209ENST00000635450 CNTNAP5Q8WYK1 1306 aa17.9■□□□□ 0.46
LINC00339-209ENST00000635450 COL4A4P53420 1690 aaPredicted RBP17.9■□□□□ 0.46
LINC00339-209ENST00000635450 SIP14410 1827 aa17.89■□□□□ 0.45
LINC00339-209ENST00000635450 ZNF200P98182 395 aaPredicted RBP17.89■□□□□ 0.45
LINC00339-209ENST00000635450 PTPN11Q06124 597 aaPredicted RBP17.89■□□□□ 0.45
LINC00339-209ENST00000635450 GPNMBQ14956 572 aa17.89■□□□□ 0.45
LINC00339-209ENST00000635450 DGKDQ16760 1214 aa17.89■□□□□ 0.45
LINC00339-209ENST00000635450 CELF3Q5SZQ8 465 aaKnown RBP17.89■□□□□ 0.45
LINC00339-209ENST00000635450 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.89■□□□□ 0.45
LINC00339-209ENST00000635450 DHX37Q8IY37 1157 aaKnown RBP17.89■□□□□ 0.45
LINC00339-209ENST00000635450 PDRG1Q9NUG6 133 aa17.89■□□□□ 0.45
LINC00339-209ENST00000635450 HDAC6Q9UBN7 1215 aa17.89■□□□□ 0.45
LINC00339-209ENST00000635450 ZBBXA8MT70 800 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 HAS3O00219 553 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 DLL1O00548 723 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 PITPNM1O00562 1244 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 MEIS2O14770 477 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 IQCF3P0C7M6 154 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 CDC27P30260 824 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 LAMC2Q13753 1193 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 MFSD10Q14728 455 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 KIAA0753Q2KHM9 967 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 TCTN1Q2MV58 587 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 HEATR3Q7Z4Q2 680 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 SESTD1Q86VW0 696 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 SMARCC2Q8TAQ2 1214 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 SPATA33Q96N06 139 aa17.88■□□□□ 0.45
LINC00339-209ENST00000635450 PRDM12Q9H4Q4 367 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms