RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 GPNMBQ14956 572 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 SART3Q15020 963 aaKnown RBP18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 FAM117BQ6P1L5 589 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 STOX1Q6ZVD7 989 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 SESTD1Q86VW0 696 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 DHX38Q92620 1227 aaKnown RBP18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 ANKS1AQ92625 1134 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 MAF1Q9H063 256 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 PXMP2Q9NR77 195 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 GTF2IRD1Q9UHL9 959 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 MTUS1Q9ULD2 1270 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 TAF6LQ9Y6J9 622 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 ERICH2A1L162 156 aa18.02■□□□□ 0.48
SNRNP48-203ENST00000634363 ZNF200P98182 395 aaPredicted RBP18.02■□□□□ 0.48
SNRNP48-203ENST00000634363 LAMC2Q13753 1193 aa18.02■□□□□ 0.48
SNRNP48-203ENST00000634363 MFSD10Q14728 455 aa18.02■□□□□ 0.48
SNRNP48-203ENST00000634363 KIAA0753Q2KHM9 967 aa18.02■□□□□ 0.48
SNRNP48-203ENST00000634363 CNKSR3Q6P9H4 555 aa18.02■□□□□ 0.48
SNRNP48-203ENST00000634363 STAG2Q8N3U4 1231 aa18.02■□□□□ 0.48
SNRNP48-203ENST00000634363 HLA-CQ95604 372 aa18.02■□□□□ 0.48
SNRNP48-203ENST00000634363 KATNAL1Q9BW62 490 aa18.02■□□□□ 0.48
SNRNP48-203ENST00000634363 COG5Q9UP83 839 aa18.02■□□□□ 0.48
SNRNP48-203ENST00000634363 NBNO60934 754 aa18.01■□□□□ 0.47
SNRNP48-203ENST00000634363 IFIT1BQ5T764 474 aaKnown RBP18.01■□□□□ 0.47
SNRNP48-203ENST00000634363 CYB5R4Q7L1T6 521 aa18.01■□□□□ 0.47
SNRNP48-203ENST00000634363 ZFP91Q96JP5 570 aaPredicted RBP18.01■□□□□ 0.47
SNRNP48-203ENST00000634363 AMNQ9BXJ7 453 aa18.01■□□□□ 0.47
SNRNP48-203ENST00000634363 CHD7Q9P2D1 2997 aa18■□□□□ 0.47
SNRNP48-203ENST00000634363 ABHD14A-ACY1A0A1B0GW23 586 aa18■□□□□ 0.47
SNRNP48-203ENST00000634363 KLRF2D3W0D1 207 aa18■□□□□ 0.47
SNRNP48-203ENST00000634363 IFIT3O14879 490 aaKnown RBP18■□□□□ 0.47
SNRNP48-203ENST00000634363 PARNO95453 639 aaKnown RBP18■□□□□ 0.47
SNRNP48-203ENST00000634363 HOXA13P31271 388 aaPredicted RBP18■□□□□ 0.47
SNRNP48-203ENST00000634363 IKBKEQ14164 716 aa18■□□□□ 0.47
SNRNP48-203ENST00000634363 KRT32Q14532 448 aa18■□□□□ 0.47
SNRNP48-203ENST00000634363 TCTN1Q2MV58 587 aa18■□□□□ 0.47
SNRNP48-203ENST00000634363 ZNF618Q5T7W0 954 aa18■□□□□ 0.47
SNRNP48-203ENST00000634363 PPTC7Q8NI37 304 aa18■□□□□ 0.47
SNRNP48-203ENST00000634363 GDPD5Q8WTR4 605 aa18■□□□□ 0.47
SNRNP48-203ENST00000634363 LPXNO60711 386 aa17.99■□□□□ 0.47
SNRNP48-203ENST00000634363 PTK7Q13308 1070 aa17.99■□□□□ 0.47
SNRNP48-203ENST00000634363 MB21D2Q8IYB1 491 aaPredicted RBP17.99■□□□□ 0.47
SNRNP48-203ENST00000634363 EMID1Q96A84 441 aaPredicted RBP17.99■□□□□ 0.47
SNRNP48-203ENST00000634363 SPATA33Q96N06 139 aa17.99■□□□□ 0.47
SNRNP48-203ENST00000634363 C1QTNF1Q9BXJ1 281 aa17.99■□□□□ 0.47
SNRNP48-203ENST00000634363 PCDHA1Q9Y5I3 950 aa17.99■□□□□ 0.47
SNRNP48-203ENST00000634363 MUC3AQ02505 3323 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 OPLAHO14841 1288 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 EPB41L2O43491 1005 aaKnown RBP17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 EIF5BO60841 1220 aaKnown RBP17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 PPFIA4O75335 1185 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 GJB5O95377 273 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 CXCL10P02778 98 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 MCM5P33992 734 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 HSD17B4P51659 736 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 HSDL1Q3SXM5 330 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 MYSM1Q5VVJ2 828 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 HOMER1Q86YM7 354 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 WNT8BQ93098 351 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 RAD9AQ99638 391 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 PDCD2LQ9BRP1 358 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 SUGCTQ9HAC7 445 aa17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 COL4A4P53420 1690 aaPredicted RBP17.98■□□□□ 0.47
SNRNP48-203ENST00000634363 HAS3O00219 553 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 PRC1O43663 620 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 PPP1R11O60927 126 aaPredicted RBP17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 GGPS1O95749 300 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 F2P00734 622 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 HSPA4P34932 840 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 RBL2Q08999 1139 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 WTAPQ15007 396 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 PGM5Q15124 567 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 SEC23AQ15436 765 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 CELF3Q5SZQ8 465 aaKnown RBP17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 KCNV1Q6PIU1 500 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 FCHSD1Q86WN1 690 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 NEK1Q96PY6 1258 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 TGS1Q96RS0 853 aaKnown RBP17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 EPHX3Q9H6B9 360 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 MLXIPQ9HAP2 919 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 REV3LO60673 3130 aa17.97■□□□□ 0.47
SNRNP48-203ENST00000634363 NCOR1O75376 2440 aa17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 LINC01553A4QN01 128 aa17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 ZBTB5O15062 677 aa17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 RGS20O76081 388 aa17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 THPOP40225 353 aa17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 ANTXR2P58335 489 aa17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 SP2Q02086 613 aa17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 HIC1Q14526 733 aa17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 TSGA10IPQ3SY00 556 aa17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 VSIG10LQ86VR7 867 aa17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 TMEM87BQ96K49 555 aa17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 MTA3Q9BTC8 594 aa17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 MAP3K20Q9NYL2 800 aaKnown RBP17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 MAD2L2Q9UI95 211 aa17.96■□□□□ 0.47
SNRNP48-203ENST00000634363 EFCAB14O75071 495 aa17.95■□□□□ 0.46
SNRNP48-203ENST00000634363 LGR5O75473 907 aa17.95■□□□□ 0.46
SNRNP48-203ENST00000634363 CCND2P30279 289 aa17.95■□□□□ 0.46
SNRNP48-203ENST00000634363 MBTPS1Q14703 1052 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms