RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 MMP1P03956 469 aa21.31■■□□□ 1
PNKP-224ENST00000631020 CLTBP09497 229 aa21.31■■□□□ 1
PNKP-224ENST00000631020 ANP32AP39687 249 aaKnown RBP21.31■■□□□ 1
PNKP-224ENST00000631020 LARP1BQ659C4 914 aaKnown RBP21.31■■□□□ 1
PNKP-224ENST00000631020 GALNT17Q6IS24 598 aa21.31■■□□□ 1
PNKP-224ENST00000631020 PRDM5Q9NQX1 630 aaPredicted RBP21.31■■□□□ 1
PNKP-224ENST00000631020 KIF3AQ9Y496 699 aa21.31■■□□□ 1
PNKP-224ENST00000631020 B4DLN1 442 aa21.3■■□□□ 1
PNKP-224ENST00000631020 KIAA0355O15063 1070 aa21.3■■□□□ 1
PNKP-224ENST00000631020 EDNRBP24530 442 aa21.3■■□□□ 1
PNKP-224ENST00000631020 TRIM29Q14134 588 aa21.3■■□□□ 1
PNKP-224ENST00000631020 JAKMIP3Q5VZ66 844 aa21.3■■□□□ 1
PNKP-224ENST00000631020 TLK2Q86UE8 772 aa21.3■■□□□ 1
PNKP-224ENST00000631020 TEX2Q8IWB9 1127 aa21.3■■□□□ 1
PNKP-224ENST00000631020 FBXO16Q8IX29 292 aaPredicted RBP21.3■■□□□ 1
PNKP-224ENST00000631020 PGBD1Q96JS3 809 aa21.3■■□□□ 1
PNKP-224ENST00000631020 RMDN3Q96TC7 470 aa21.3■■□□□ 1
PNKP-224ENST00000631020 PCDHA6Q9UN73 950 aa21.3■■□□□ 1
PNKP-224ENST00000631020 PCDHA8Q9Y5H6 950 aa21.3■■□□□ 1
PNKP-224ENST00000631020 RBM47A0AV96 593 aaKnown RBP21.29■■□□□ 1
PNKP-224ENST00000631020 DCDC2CA8MYV0 355 aa21.29■■□□□ 1
PNKP-224ENST00000631020 CABYRO75952 493 aa21.29■■□□□ 1
PNKP-224ENST00000631020 SMPD1P17405 629 aa21.29■■□□□ 1
PNKP-224ENST00000631020 CDK7P50613 346 aa21.29■■□□□ 1
PNKP-224ENST00000631020 REXO1Q8N1G1 1221 aaKnown RBP21.29■■□□□ 1
PNKP-224ENST00000631020 BICD2Q8TD16 824 aa21.29■■□□□ 1
PNKP-224ENST00000631020 SEZ6LQ9BYH1 1024 aa21.29■■□□□ 1
PNKP-224ENST00000631020 AP5M1Q9H0R1 490 aa21.29■■□□□ 1
PNKP-224ENST00000631020 TRIM43BA6NCK2 446 aa21.29■■□□□ 1
PNKP-224ENST00000631020 BTBD18B2RXH4 712 aa21.29■■□□□ 1
PNKP-224ENST00000631020 PQBP1O60828 265 aaKnown RBP21.29■■□□□ 1
PNKP-224ENST00000631020 FSCN1Q16658 493 aaKnown RBP21.29■■□□□ 1
PNKP-224ENST00000631020 DUSP28Q4G0W2 176 aa21.29■■□□□ 1
PNKP-224ENST00000631020 NSUN6Q8TEA1 469 aaKnown RBP21.29■■□□□ 1
PNKP-224ENST00000631020 TRIM43Q96BQ3 446 aaPredicted RBP21.29■■□□□ 1
PNKP-224ENST00000631020 PXMP2Q9NR77 195 aa21.29■■□□□ 1
PNKP-224ENST00000631020 PDGFCQ9NRA1 345 aa21.29■■□□□ 1
PNKP-224ENST00000631020 A0A0U1RQG5 324 aaPredicted RBP21.28■■□□□ 1
PNKP-224ENST00000631020 ZEB2O60315 1214 aa21.28■■□□□ 1
PNKP-224ENST00000631020 EIF2AK2P19525 551 aaKnown RBP21.28■■□□□ 1
PNKP-224ENST00000631020 SYT1P21579 422 aa21.28■■□□□ 1
PNKP-224ENST00000631020 IRX5P78411 483 aaPredicted RBP21.28■■□□□ 1
PNKP-224ENST00000631020 NR5A1Q13285 461 aa21.28■■□□□ 1
PNKP-224ENST00000631020 EEPD1Q7L9B9 569 aa21.28■■□□□ 1
PNKP-224ENST00000631020 SH3RF1Q7Z6J0 888 aa21.28■■□□□ 1
PNKP-224ENST00000631020 DIS3L2Q8IYB7 885 aaKnown RBP21.28■■□□□ 1
PNKP-224ENST00000631020 TNFRSF25Q93038 417 aa21.28■■□□□ 1
PNKP-224ENST00000631020 LRCH3Q96II8 777 aa21.28■■□□□ 1
PNKP-224ENST00000631020 SPDYE3A6NKU9 549 aa21.27■■□□□ 1
PNKP-224ENST00000631020 ARVCFO00192 962 aa21.27■■□□□ 1
PNKP-224ENST00000631020 FOSP01100 380 aaPredicted RBP21.27■■□□□ 1
PNKP-224ENST00000631020 KRT2P35908 639 aa21.27■■□□□ 1
PNKP-224ENST00000631020 PDE4DQ08499 809 aa21.27■■□□□ 1
PNKP-224ENST00000631020 FAAP100Q0VG06 881 aa21.27■■□□□ 1
PNKP-224ENST00000631020 AP3B2Q13367 1082 aa21.27■■□□□ 1
PNKP-224ENST00000631020 EARS2Q5JPH6 523 aaKnown RBP21.27■■□□□ 1
PNKP-224ENST00000631020 ARHGEF16Q5VV41 709 aa21.27■■□□□ 1
PNKP-224ENST00000631020 IL31RAQ8NI17 732 aa21.27■■□□□ 1
PNKP-224ENST00000631020 PDCD2LQ9BRP1 358 aa21.27■■□□□ 1
PNKP-224ENST00000631020 ANO3Q9BYT9 981 aa21.27■■□□□ 1
PNKP-224ENST00000631020 FRMPD4Q14CM0 1322 aa21.26■□□□□ 0.99
PNKP-224ENST00000631020 NKRFO15226 690 aaKnown RBP eCLIP21.26■□□□□ 0.99
PNKP-224ENST00000631020 PGM5Q15124 567 aa21.26■□□□□ 0.99
PNKP-224ENST00000631020 BADQ92934 168 aa21.26■□□□□ 0.99
PNKP-224ENST00000631020 WDR11Q9BZH6 1224 aa21.26■□□□□ 0.99
PNKP-224ENST00000631020 TMEM39AQ9NV64 488 aa21.26■□□□□ 0.99
PNKP-224ENST00000631020 KIF28PB7ZC32 967 aa21.25■□□□□ 0.99
PNKP-224ENST00000631020 DYNC1LI2O43237 492 aaPredicted RBP21.25■□□□□ 0.99
PNKP-224ENST00000631020 EDIL3O43854 480 aa21.25■□□□□ 0.99
PNKP-224ENST00000631020 NR3C2P08235 984 aa21.25■□□□□ 0.99
PNKP-224ENST00000631020 PDCP20941 246 aa21.25■□□□□ 0.99
PNKP-224ENST00000631020 BEX3Q00994 111 aa21.25■□□□□ 0.99
PNKP-224ENST00000631020 SLC43A3Q8NBI5 491 aa21.25■□□□□ 0.99
PNKP-224ENST00000631020 SCFD2Q8WU76 684 aa21.25■□□□□ 0.99
PNKP-224ENST00000631020 CRYGNQ8WXF5 182 aa21.25■□□□□ 0.99
PNKP-224ENST00000631020 VTI1AQ96AJ9 217 aa21.25■□□□□ 0.99
PNKP-224ENST00000631020 IWS1Q96ST2 819 aa21.25■□□□□ 0.99
PNKP-224ENST00000631020 FAM205CA6NFA0 338 aa21.24■□□□□ 0.99
PNKP-224ENST00000631020 H3BQV1 296 aa21.24■□□□□ 0.99
PNKP-224ENST00000631020 RAG1P15918 1043 aa21.24■□□□□ 0.99
PNKP-224ENST00000631020 SAFBQ15424 915 aaKnown RBP eCLIP21.24■□□□□ 0.99
PNKP-224ENST00000631020 MCTP2Q6DN12 878 aa21.24■□□□□ 0.99
PNKP-224ENST00000631020 VSIG10LQ86VR7 867 aa21.24■□□□□ 0.99
PNKP-224ENST00000631020 ZFP91Q96JP5 570 aaPredicted RBP21.24■□□□□ 0.99
PNKP-224ENST00000631020 BRMS1Q9HCU9 246 aa21.24■□□□□ 0.99
PNKP-224ENST00000631020 TBX21Q9UL17 535 aa21.24■□□□□ 0.99
PNKP-224ENST00000631020 KIAA1217Q5T5P2 1943 aa21.24■□□□□ 0.99
PNKP-224ENST00000631020 ITGB8P26012 769 aa21.24■□□□□ 0.99
PNKP-224ENST00000631020 SREBF1P36956 1147 aa21.24■□□□□ 0.99
PNKP-224ENST00000631020 CXCL17Q6UXB2 119 aa21.24■□□□□ 0.99
PNKP-224ENST00000631020 FAM126BQ8IXS8 530 aa21.24■□□□□ 0.99
PNKP-224ENST00000631020 FOXP1Q9H334 677 aaPredicted RBP21.24■□□□□ 0.99
PNKP-224ENST00000631020 TLR3O15455 904 aaKnown RBP21.23■□□□□ 0.99
PNKP-224ENST00000631020 MYCLP12524 364 aaPredicted RBP21.23■□□□□ 0.99
PNKP-224ENST00000631020 U2AF2P26368 475 aaKnown RBP eCLIP21.23■□□□□ 0.994e-8■□□□□ 9.6
PNKP-224ENST00000631020 CPT1AP50416 773 aa21.23■□□□□ 0.99
PNKP-224ENST00000631020 MRPS9P82933 396 aaKnown RBP21.23■□□□□ 0.99
PNKP-224ENST00000631020 PIK3AP1Q6ZUJ8 805 aa21.23■□□□□ 0.99
PNKP-224ENST00000631020 KRT25Q7Z3Z0 450 aa21.23■□□□□ 0.99
PNKP-224ENST00000631020 MTMR6Q9Y217 621 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms