RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 LIFRP42702 1097 aa18.96■□□□□ 0.63
LINC00628-201ENST00000628516 SP2Q02086 613 aa18.96■□□□□ 0.63
LINC00628-201ENST00000628516 MFSD10Q14728 455 aa18.96■□□□□ 0.63
LINC00628-201ENST00000628516 RAB11FIP4Q86YS3 637 aa18.96■□□□□ 0.63
LINC00628-201ENST00000628516 CMTR1Q8N1G2 835 aaKnown RBP18.96■□□□□ 0.63
LINC00628-201ENST00000628516 CCDC155Q8N6L0 562 aa18.96■□□□□ 0.63
LINC00628-201ENST00000628516 C7orf31Q8N865 590 aa18.96■□□□□ 0.63
LINC00628-201ENST00000628516 SMARCC2Q8TAQ2 1214 aa18.96■□□□□ 0.63
LINC00628-201ENST00000628516 GPKOWQ92917 476 aaPredicted RBP eCLIP18.96■□□□□ 0.63
LINC00628-201ENST00000628516 CUL5Q93034 780 aa18.96■□□□□ 0.63
LINC00628-201ENST00000628516 MLXIPQ9HAP2 919 aa18.96■□□□□ 0.63
LINC00628-201ENST00000628516 HDAC6Q9UBN7 1215 aa18.96■□□□□ 0.63
LINC00628-201ENST00000628516 SLC12A7Q9Y666 1083 aa18.96■□□□□ 0.63
LINC00628-201ENST00000628516 PRUNE2Q8WUY3 3088 aa18.96■□□□□ 0.63
LINC00628-201ENST00000628516 PPFIA4O75335 1185 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 F2P00734 622 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 CALM1P0DP23 149 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 CALM2P0DP24 149 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 CALM3P0DP25 149 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 ACTN1P12814 892 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 RABGGTBP53611 331 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 KIAA0753Q2KHM9 967 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 HSDL1Q3SXM5 330 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 GNPTABQ3T906 1256 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 RNF20Q5VTR2 975 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 SRBD1Q8N5C6 995 aaKnown RBP18.95■□□□□ 0.62
LINC00628-201ENST00000628516 CAGE1Q8TC20 777 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 FTOQ9C0B1 505 aaKnown RBP eCLIP18.95■□□□□ 0.62
LINC00628-201ENST00000628516 NKX2-4Q9H2Z4 354 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 GTF2IRD1Q9UHL9 959 aa18.95■□□□□ 0.62
LINC00628-201ENST00000628516 YBX2Q9Y2T7 364 aaKnown RBP18.95■□□□□ 0.62
LINC00628-201ENST00000628516 MYH7BA7E2Y1 1941 aa18.94■□□□□ 0.62
LINC00628-201ENST00000628516 HOXD8P13378 290 aaPredicted RBP18.94■□□□□ 0.62
LINC00628-201ENST00000628516 ATP2A2P16615 1042 aaKnown RBP18.94■□□□□ 0.62
LINC00628-201ENST00000628516 MRPS9P82933 396 aaKnown RBP18.94■□□□□ 0.62
LINC00628-201ENST00000628516 USP17L6PQ6QN14 398 aa18.94■□□□□ 0.62
LINC00628-201ENST00000628516 CTAGE1Q96RT6 745 aa18.94■□□□□ 0.62
LINC00628-201ENST00000628516 SLC28A3Q9HAS3 691 aa18.94■□□□□ 0.62
LINC00628-201ENST00000628516 RTEL1Q9NZ71 1219 aa18.94■□□□□ 0.62
LINC00628-201ENST00000628516 SCN5AQ14524 2016 aa18.94■□□□□ 0.62
LINC00628-201ENST00000628516 FRMPD4Q14CM0 1322 aa18.94■□□□□ 0.62
LINC00628-201ENST00000628516 HAS3O00219 553 aa18.93■□□□□ 0.62
LINC00628-201ENST00000628516 STAM2O75886 525 aa18.93■□□□□ 0.62
LINC00628-201ENST00000628516 CCDC82Q8N4S0 544 aa18.93■□□□□ 0.62
LINC00628-201ENST00000628516 AFAP1L1Q8TED9 768 aa18.93■□□□□ 0.62
LINC00628-201ENST00000628516 GAS2L1Q99501 681 aaPredicted RBP18.93■□□□□ 0.62
LINC00628-201ENST00000628516 PRDM12Q9H4Q4 367 aa18.93■□□□□ 0.62
LINC00628-201ENST00000628516 CHD9Q3L8U1 2897 aa18.93■□□□□ 0.62
LINC00628-201ENST00000628516 MEIS2O14770 477 aa18.92■□□□□ 0.62
LINC00628-201ENST00000628516 MYOGP15173 224 aa18.92■□□□□ 0.62
LINC00628-201ENST00000628516 SELPP16109 830 aa18.92■□□□□ 0.62
LINC00628-201ENST00000628516 SYNE3Q6ZMZ3 975 aa18.92■□□□□ 0.62
LINC00628-201ENST00000628516 MICU3Q86XE3 530 aa18.92■□□□□ 0.62
LINC00628-201ENST00000628516 FANCBQ8NB91 859 aa18.92■□□□□ 0.62
LINC00628-201ENST00000628516 DHX38Q92620 1227 aaKnown RBP18.92■□□□□ 0.62
LINC00628-201ENST00000628516 INPP4AQ96PE3 977 aaPredicted RBP18.92■□□□□ 0.62
LINC00628-201ENST00000628516 NEK1Q96PY6 1258 aa18.92■□□□□ 0.62
LINC00628-201ENST00000628516 TANC1Q9C0D5 1861 aa18.91■□□□□ 0.62
LINC00628-201ENST00000628516 hCG_1642624A0A1W2PR95 340 aa18.91■□□□□ 0.62
LINC00628-201ENST00000628516 PIK3CDO00329 1044 aa18.91■□□□□ 0.62
LINC00628-201ENST00000628516 NOP56O00567 594 aaKnown RBP18.91■□□□□ 0.62
LINC00628-201ENST00000628516 ICAM3P32942 547 aa18.91■□□□□ 0.62
LINC00628-201ENST00000628516 NEDD9Q14511 834 aa18.91■□□□□ 0.62
LINC00628-201ENST00000628516 PPP2R2DQ66LE6 453 aa18.91■□□□□ 0.62
LINC00628-201ENST00000628516 LRRC8DQ7L1W4 858 aa18.91■□□□□ 0.62
LINC00628-201ENST00000628516 SGMS1Q86VZ5 419 aa18.91■□□□□ 0.62
LINC00628-201ENST00000628516 BCAS3Q9H6U6 928 aa18.91■□□□□ 0.62
LINC00628-201ENST00000628516 PSTPIP2Q9H939 334 aa18.91■□□□□ 0.62
LINC00628-201ENST00000628516 PCDHA11Q9Y5I1 949 aa18.91■□□□□ 0.62
LINC00628-201ENST00000628516 TRIP12Q14669 1992 aaPredicted RBP18.91■□□□□ 0.62
LINC00628-201ENST00000628516 VCANP13611 3396 aa18.9■□□□□ 0.62
LINC00628-201ENST00000628516 GBF1Q92538 1859 aa18.9■□□□□ 0.62
LINC00628-201ENST00000628516 SPATA31C2B4DYI2 1134 aa18.9■□□□□ 0.62
LINC00628-201ENST00000628516 FIBPO43427 364 aa18.9■□□□□ 0.62
LINC00628-201ENST00000628516 CKBP12277 381 aa18.9■□□□□ 0.62
LINC00628-201ENST00000628516 ZNF200P98182 395 aaPredicted RBP18.9■□□□□ 0.62
LINC00628-201ENST00000628516 SEMA3FQ13275 785 aa18.9■□□□□ 0.62
LINC00628-201ENST00000628516 PTK7Q13308 1070 aa18.9■□□□□ 0.62
LINC00628-201ENST00000628516 PCNX4Q63HM2 1172 aa18.9■□□□□ 0.62
LINC00628-201ENST00000628516 TMTC3Q6ZXV5 915 aa18.9■□□□□ 0.62
LINC00628-201ENST00000628516 CYFIP1Q7L576 1253 aa18.9■□□□□ 0.62
LINC00628-201ENST00000628516 SLC9A7Q96T83 725 aa18.9■□□□□ 0.62
LINC00628-201ENST00000628516 C16orf70Q9BSU1 422 aa18.9■□□□□ 0.62
LINC00628-201ENST00000628516 MYO9BQ13459 2157 aa18.9■□□□□ 0.62
LINC00628-201ENST00000628516 H3BRB1 525 aa18.89■□□□□ 0.61
LINC00628-201ENST00000628516 LGALS2P05162 132 aa18.89■□□□□ 0.61
LINC00628-201ENST00000628516 RBL2Q08999 1139 aa18.89■□□□□ 0.61
LINC00628-201ENST00000628516 XRRA1Q6P2D8 792 aa18.89■□□□□ 0.61
LINC00628-201ENST00000628516 METTL7BQ6UX53 244 aa18.89■□□□□ 0.61
LINC00628-201ENST00000628516 RASEFQ8IZ41 740 aa18.89■□□□□ 0.61
LINC00628-201ENST00000628516 PHOSPHO2Q8TCD6 241 aa18.89■□□□□ 0.61
LINC00628-201ENST00000628516 TCEANC2Q96MN5 208 aa18.89■□□□□ 0.61
LINC00628-201ENST00000628516 TUT1Q9H6E5 874 aaKnown RBP18.89■□□□□ 0.61
LINC00628-201ENST00000628516 TET1Q8NFU7 2136 aa18.88■□□□□ 0.61
LINC00628-201ENST00000628516 BAIAP3O94812 1187 aa18.88■□□□□ 0.61
LINC00628-201ENST00000628516 PARNO95453 639 aaKnown RBP18.88■□□□□ 0.61
LINC00628-201ENST00000628516 IGFBP4P22692 258 aa18.88■□□□□ 0.61
LINC00628-201ENST00000628516 EXOSC10Q01780 885 aaKnown RBP18.88■□□□□ 0.61
LINC00628-201ENST00000628516 HIC1Q14526 733 aa18.88■□□□□ 0.61
LINC00628-201ENST00000628516 GPNMBQ14956 572 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms