RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 SMARCC2Q8TAQ2 1214 aa29.59■■■□□ 2.33
TCF4-259ENST00000627568 ALG1Q9BT22 464 aa29.59■■■□□ 2.33
TCF4-259ENST00000627568 GTF2IRD1Q9UHL9 959 aa29.59■■■□□ 2.33
TCF4-259ENST00000627568 SLC12A7Q9Y666 1083 aa29.59■■■□□ 2.33
TCF4-259ENST00000627568 SORBS3O60504 671 aa29.58■■■□□ 2.33
TCF4-259ENST00000627568 STAM2O75886 525 aa29.58■■■□□ 2.33
TCF4-259ENST00000627568 FRMPD4Q14CM0 1322 aa29.58■■■□□ 2.33
TCF4-259ENST00000627568 ZFP91Q96JP5 570 aaPredicted RBP29.58■■■□□ 2.33
TCF4-259ENST00000627568 GAS2L1Q99501 681 aaPredicted RBP29.58■■■□□ 2.33
TCF4-259ENST00000627568 FTOQ9C0B1 505 aaKnown RBP eCLIP29.58■■■□□ 2.33
TCF4-259ENST00000627568 MLXIPQ9HAP2 919 aa29.58■■■□□ 2.33
TCF4-259ENST00000627568 SLC28A3Q9HAS3 691 aa29.58■■■□□ 2.33
TCF4-259ENST00000627568 A0A0C4DFX4 3053 aa29.57■■■□□ 2.32
TCF4-259ENST00000627568 PPFIA4O75335 1185 aa29.57■■■□□ 2.32
TCF4-259ENST00000627568 PLEKHA8P1O95397 391 aa29.57■■■□□ 2.32
TCF4-259ENST00000627568 ATP2A2P16615 1042 aaKnown RBP29.57■■■□□ 2.32
TCF4-259ENST00000627568 RXRAP19793 462 aa29.57■■■□□ 2.32
TCF4-259ENST00000627568 KIAA0753Q2KHM9 967 aa29.57■■■□□ 2.32
TCF4-259ENST00000627568 SKAP1Q86WV1 359 aa29.57■■■□□ 2.32
TCF4-259ENST00000627568 AFAP1L1Q8TED9 768 aa29.57■■■□□ 2.32
TCF4-259ENST00000627568 VWCEQ96DN2 955 aa29.57■■■□□ 2.32
TCF4-259ENST00000627568 NKX2-4Q9H2Z4 354 aa29.57■■■□□ 2.32
TCF4-259ENST00000627568 HDAC6Q9UBN7 1215 aa29.57■■■□□ 2.32
TCF4-259ENST00000627568 HOXD8P13378 290 aaPredicted RBP29.56■■■□□ 2.32
TCF4-259ENST00000627568 HSDL1Q3SXM5 330 aa29.56■■■□□ 2.32
TCF4-259ENST00000627568 LRRC2Q9BYS8 371 aa29.56■■■□□ 2.32
TCF4-259ENST00000627568 SYNE3Q6ZMZ3 975 aa29.55■■■□□ 2.32
TCF4-259ENST00000627568 SRBD1Q8N5C6 995 aaKnown RBP29.55■■■□□ 2.32
TCF4-259ENST00000627568 UNC80Q8N2C7 3258 aa29.55■■■□□ 2.32
TCF4-259ENST00000627568 TET1Q8NFU7 2136 aa29.54■■■□□ 2.32
TCF4-259ENST00000627568 HAS3O00219 553 aa29.54■■■□□ 2.32
TCF4-259ENST00000627568 NOP56O00567 594 aaKnown RBP29.54■■■□□ 2.32
TCF4-259ENST00000627568 SP2Q02086 613 aa29.54■■■□□ 2.32
TCF4-259ENST00000627568 COL9A3Q14050 684 aaPredicted RBP29.54■■■□□ 2.32
TCF4-259ENST00000627568 USP17L6PQ6QN14 398 aa29.54■■■□□ 2.32
TCF4-259ENST00000627568 MICU3Q86XE3 530 aa29.54■■■□□ 2.32
TCF4-259ENST00000627568 GPKOWQ92917 476 aaPredicted RBP eCLIP29.54■■■□□ 2.32
TCF4-259ENST00000627568 INPP4AQ96PE3 977 aaPredicted RBP29.54■■■□□ 2.32
TCF4-259ENST00000627568 CTAGE1Q96RT6 745 aa29.54■■■□□ 2.32
TCF4-259ENST00000627568 PRDM12Q9H4Q4 367 aa29.54■■■□□ 2.32
TCF4-259ENST00000627568 YBX2Q9Y2T7 364 aaKnown RBP29.54■■■□□ 2.32
TCF4-259ENST00000627568 PCDHA11Q9Y5I1 949 aa29.54■■■□□ 2.32
TCF4-259ENST00000627568 PIK3CDO00329 1044 aa29.53■■■□□ 2.32
TCF4-259ENST00000627568 CDC45O75419 566 aa29.53■■■□□ 2.32
TCF4-259ENST00000627568 SELPP16109 830 aa29.53■■■□□ 2.32
TCF4-259ENST00000627568 RABGGTBP53611 331 aa29.53■■■□□ 2.32
TCF4-259ENST00000627568 MRPS9P82933 396 aaKnown RBP29.53■■■□□ 2.32
TCF4-259ENST00000627568 NEDD9Q14511 834 aa29.53■■■□□ 2.32
TCF4-259ENST00000627568 LRRC8DQ7L1W4 858 aa29.53■■■□□ 2.32
TCF4-259ENST00000627568 RAB11FIP4Q86YS3 637 aa29.53■■■□□ 2.32
TCF4-259ENST00000627568 CMTR1Q8N1G2 835 aaKnown RBP29.53■■■□□ 2.32
TCF4-259ENST00000627568 SLC9A7Q96T83 725 aa29.53■■■□□ 2.32
TCF4-259ENST00000627568 FIBPO43427 364 aa29.52■■■□□ 2.32
TCF4-259ENST00000627568 PARNO95453 639 aaKnown RBP29.52■■■□□ 2.32
TCF4-259ENST00000627568 ICAM3P32942 547 aa29.52■■■□□ 2.32
TCF4-259ENST00000627568 RBL2Q08999 1139 aa29.52■■■□□ 2.32
TCF4-259ENST00000627568 PPP2R2DQ66LE6 453 aa29.52■■■□□ 2.32
TCF4-259ENST00000627568 XRRA1Q6P2D8 792 aa29.52■■■□□ 2.32
TCF4-259ENST00000627568 SGMS1Q86VZ5 419 aa29.52■■■□□ 2.32
TCF4-259ENST00000627568 FANCBQ8NB91 859 aa29.52■■■□□ 2.32
TCF4-259ENST00000627568 NEK1Q96PY6 1258 aa29.52■■■□□ 2.32
TCF4-259ENST00000627568 RTEL1Q9NZ71 1219 aa29.52■■■□□ 2.32
TCF4-259ENST00000627568 EYSQ5T1H1 3165 aa29.52■■■□□ 2.32
TCF4-259ENST00000627568 MEIS2O14770 477 aa29.51■■■□□ 2.31
TCF4-259ENST00000627568 PTK7Q13308 1070 aa29.51■■■□□ 2.31
TCF4-259ENST00000627568 PCNX4Q63HM2 1172 aa29.51■■■□□ 2.31
TCF4-259ENST00000627568 TMTC3Q6ZXV5 915 aa29.51■■■□□ 2.31
TCF4-259ENST00000627568 DHX38Q92620 1227 aaKnown RBP29.51■■■□□ 2.31
TCF4-259ENST00000627568 PSTPIP2Q9H939 334 aa29.51■■■□□ 2.31
TCF4-259ENST00000627568 BAIAP3O94812 1187 aa29.5■■■□□ 2.31
TCF4-259ENST00000627568 METTL7BQ6UX53 244 aa29.5■■■□□ 2.31
TCF4-259ENST00000627568 CCDC82Q8N4S0 544 aa29.5■■■□□ 2.31
TCF4-259ENST00000627568 DOCK5Q9H7D0 1870 aa29.5■■■□□ 2.31
TCF4-259ENST00000627568 SPATA31C2B4DYI2 1134 aa29.49■■■□□ 2.31
TCF4-259ENST00000627568 CKBP12277 381 aa29.49■■■□□ 2.31
TCF4-259ENST00000627568 NLRX1Q86UT6 975 aa29.49■■■□□ 2.31
TCF4-259ENST00000627568 PHOSPHO2Q8TCD6 241 aa29.49■■■□□ 2.31
TCF4-259ENST00000627568 C16orf70Q9BSU1 422 aa29.49■■■□□ 2.31
TCF4-259ENST00000627568 LGALS2P05162 132 aa29.48■■■□□ 2.31
TCF4-259ENST00000627568 KCNJ6P48051 423 aa29.48■■■□□ 2.31
TCF4-259ENST00000627568 KRT32Q14532 448 aa29.48■■■□□ 2.31
TCF4-259ENST00000627568 APOA5Q6Q788 366 aa29.48■■■□□ 2.31
TCF4-259ENST00000627568 CYFIP1Q7L576 1253 aa29.48■■■□□ 2.31
TCF4-259ENST00000627568 RBM28Q9NW13 759 aaKnown RBP29.48■■■□□ 2.31
TCF4-259ENST00000627568 hCG_1642624A0A1W2PR95 340 aa29.47■■■□□ 2.31
TCF4-259ENST00000627568 H3BRB1 525 aa29.47■■■□□ 2.31
TCF4-259ENST00000627568 MYOGP15173 224 aa29.47■■■□□ 2.31
TCF4-259ENST00000627568 SEMA3FQ13275 785 aa29.47■■■□□ 2.31
TCF4-259ENST00000627568 HEATR3Q7Z4Q2 680 aa29.47■■■□□ 2.31
TCF4-259ENST00000627568 USP26Q9BXU7 913 aa29.47■■■□□ 2.31
TCF4-259ENST00000627568 TUT1Q9H6E5 874 aaKnown RBP29.47■■■□□ 2.31
TCF4-259ENST00000627568 ZNF200P98182 395 aaPredicted RBP29.46■■■□□ 2.31
TCF4-259ENST00000627568 DHX32Q7L7V1 743 aaKnown RBP29.46■■■□□ 2.31
TCF4-259ENST00000627568 GIMAP8Q8ND71 665 aaPredicted RBP29.46■■■□□ 2.31
TCF4-259ENST00000627568 SENP7Q9BQF6 1050 aa29.46■■■□□ 2.31
TCF4-259ENST00000627568 PRUNE2Q8WUY3 3088 aa29.45■■■□□ 2.31
TCF4-259ENST00000627568 C17orf102A2RUQ5 167 aa29.45■■■□□ 2.31
TCF4-259ENST00000627568 SPDYE3A6NKU9 549 aa29.45■■■□□ 2.31
TCF4-259ENST00000627568 KIF28PB7ZC32 967 aa29.45■■■□□ 2.31
TCF4-259ENST00000627568 IGFBP4P22692 258 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms