RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 NLGN2Q8NFZ4 835 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 PI4K2BQ8TCG2 481 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 COG1Q8WTW3 980 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 CHTF18Q8WVB6 975 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 TRMT2BQ96GJ1 504 aaKnown RBP3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 CD244Q9BZW8 370 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 IRF2BPLQ9H1B7 796 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 RXFP1Q9HBX9 757 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 TNFRSF12AQ9NP84 129 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 PDLIM7Q9NR12 457 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 PCMTD2Q9NV79 361 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 B4GALT6Q9UBX8 382 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 MCM8Q9UJA3 840 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 CTNND2Q9UQB3 1225 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 SIT1Q9Y3P8 196 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 TELO2Q9Y4R8 837 aa3.87□□□□□ -1.79
SCARNA4-202ENST00000625402 PTPDC1A2A3K4 754 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 DVL2O14641 736 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 GPR39O43194 453 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 KATNA1O75449 491 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 PDGFRBP09619 1106 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 ZBTB48P10074 688 aaPredicted RBP3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 GNAT1P11488 350 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 KRT15P19012 456 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 SDHBP21912 280 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 LACTBP83111 547 aaPredicted RBP3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 TMPRSS15P98073 1019 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 CHRNEQ04844 493 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 LRP8Q14114 963 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 SEC23AQ15436 765 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 SLC14A2Q15849 920 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 FAM47CQ5HY64 1035 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 ZMYM1Q5SVZ6 1142 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 FYB2Q5VWT5 728 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 GALNT18Q6P9A2 607 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 OTOP1Q7RTM1 612 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 OTOP3Q7RTS5 596 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 OSTM1Q86WC4 334 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 KIF18BQ86Y91 864 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 RIOX2Q8IUF8 465 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 TP53INP2Q8IXH6 220 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 OR2W6PQ8NHA6 318 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 ATL2Q8NHH9 583 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 GPR101Q96P66 508 aaPredicted RBP3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 RNF32Q9H0A6 362 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 MS4A5Q9H3V2 200 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 EPB41L1Q9H4G0 881 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 VTA1Q9NP79 307 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 HOMER2Q9NSB8 354 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 CATSPERZQ9NTU4 200 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 SPTLC3Q9NUV7 552 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 TYW1Q9NV66 732 aaKnown RBP3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 THG1LQ9NWX6 298 aaKnown RBP3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 ADGRE2Q9UHX3 823 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 PLA2G2DQ9UNK4 145 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 THRAP3Q9Y2W1 955 aaKnown RBP3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 HCFC2Q9Y5Z7 792 aa3.86□□□□□ -1.79
SCARNA4-202ENST00000625402 HYAL3O43820 417 aaPredicted RBP3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 KRT37O76014 449 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 FKBP9O95302 570 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 WNT11O96014 354 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 LTFP02788 710 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 DBHP09172 617 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 IL2P60568 153 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 ST5P78524 1137 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 MTMR1Q13613 665 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 GPR19Q15760 415 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 EMC4Q5J8M3 183 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 MROH9Q5TGP6 573 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 CPZQ66K79 652 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 HHIPL2Q6UWX4 724 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 ARHGAP36Q6ZRI8 547 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 FKBP9P1Q75LS8 142 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 FERMT3Q86UX7 667 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 SIRT2Q8IXJ6 389 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 RAVER1Q8IY67 606 aaKnown RBP3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 UHMK1Q8TAS1 419 aaKnown RBP3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 WDR66Q8TBY9 1149 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 USP7Q93009 1102 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 SYTL4Q96C24 671 aaPredicted RBP3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 ASPSCR1Q9BZE9 553 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 IFT22Q9H7X7 185 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 RC3H2Q9HBD1 1191 aaKnown RBP3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 EMC7Q9NPA0 242 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 OXSMQ9NWU1 459 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 GPR160Q9UJ42 338 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 SRPK3Q9UPE1 567 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 APOBEC2Q9Y235 224 aaKnown RBP3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 COA3Q9Y2R0 106 aaPredicted RBP3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 PHLDB1Q86UU1 1377 aa3.85□□□□□ -1.79
SCARNA4-202ENST00000625402 SCO2A0A1W2PP80 73 aa3.84□□□□□ -1.79
SCARNA4-202ENST00000625402 SGSM2O43147 1006 aa3.84□□□□□ -1.79
SCARNA4-202ENST00000625402 TGM5O43548 720 aa3.84□□□□□ -1.79
SCARNA4-202ENST00000625402 BRINP1O60477 761 aa3.84□□□□□ -1.79
SCARNA4-202ENST00000625402 PRKD3O94806 890 aa3.84□□□□□ -1.79
SCARNA4-202ENST00000625402 HMGB1P09429 215 aaKnown RBP3.84□□□□□ -1.79
SCARNA4-202ENST00000625402 THBS2P35442 1172 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms