RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 PARP1P09874 1014 aaKnown RBP12.89□□□□□ -0.35
DDX41-218ENST00000625286 HOXA13P31271 388 aaPredicted RBP12.89□□□□□ -0.35
DDX41-218ENST00000625286 KCNJ6P48051 423 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 ERVK-21P61565 698 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 PTK7Q13308 1070 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 SEC23AQ15436 765 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 AAK1Q2M2I8 961 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 ASPRV1Q53RT3 343 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 FAM117BQ6P1L5 589 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 STOX1Q6ZVD7 989 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 CYB5R4Q7L1T6 521 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 CHD1LQ86WJ1 897 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 MCF2L2Q86YR7 1114 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 C7orf31Q8N865 590 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 PDCD2LQ9BRP1 358 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 C16orf70Q9BSU1 422 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 SENP2Q9HC62 589 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 MAD2L2Q9UI95 211 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 MTUS1Q9ULD2 1270 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 MRPL11Q9Y3B7 192 aaKnown RBP12.89□□□□□ -0.35
DDX41-218ENST00000625286 TELO2Q9Y4R8 837 aa12.89□□□□□ -0.35
DDX41-218ENST00000625286 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.88□□□□□ -0.35
DDX41-218ENST00000625286 ABHD14A-ACY1A0A1B0GW23 586 aa12.88□□□□□ -0.35
DDX41-218ENST00000625286 NUCB1Q02818 461 aa12.88□□□□□ -0.35
DDX41-218ENST00000625286 LAMC2Q13753 1193 aa12.88□□□□□ -0.35
DDX41-218ENST00000625286 CELF3Q5SZQ8 465 aaKnown RBP12.88□□□□□ -0.35
DDX41-218ENST00000625286 VSIG10LQ86VR7 867 aa12.88□□□□□ -0.35
DDX41-218ENST00000625286 IQCA1Q86XH1 822 aa12.88□□□□□ -0.35
DDX41-218ENST00000625286 DHX37Q8IY37 1157 aaKnown RBP12.88□□□□□ -0.35
DDX41-218ENST00000625286 CCDC155Q8N6L0 562 aa12.88□□□□□ -0.35
DDX41-218ENST00000625286 RAD9AQ99638 391 aa12.88□□□□□ -0.35
DDX41-218ENST00000625286 LRFN3Q9BTN0 628 aa12.88□□□□□ -0.35
DDX41-218ENST00000625286 ZBED2Q9BTP6 218 aa12.88□□□□□ -0.35
DDX41-218ENST00000625286 DSCC1Q9BVC3 393 aa12.88□□□□□ -0.35
DDX41-218ENST00000625286 MRVI1Q9Y6F6 885 aa12.88□□□□□ -0.35
DDX41-218ENST00000625286 MICAL3Q7RTP6 2002 aa12.88□□□□□ -0.35
DDX41-218ENST00000625286 SIP14410 1827 aa12.88□□□□□ -0.35
DDX41-218ENST00000625286 C5orf42Q9H799 3197 aa12.87□□□□□ -0.35
DDX41-218ENST00000625286 PALM3A6NDB9 673 aaPredicted RBP12.87□□□□□ -0.35
DDX41-218ENST00000625286 KLRF2D3W0D1 207 aa12.87□□□□□ -0.35
DDX41-218ENST00000625286 DHX16O60231 1041 aaKnown RBP12.87□□□□□ -0.35
DDX41-218ENST00000625286 PPFIA4O75335 1185 aa12.87□□□□□ -0.35
DDX41-218ENST00000625286 MYCLP12524 364 aaPredicted RBP12.87□□□□□ -0.35
DDX41-218ENST00000625286 HOXC8P31273 242 aa12.87□□□□□ -0.35
DDX41-218ENST00000625286 PLA2G5P39877 138 aa12.87□□□□□ -0.35
DDX41-218ENST00000625286 PGM5Q15124 567 aa12.87□□□□□ -0.35
DDX41-218ENST00000625286 CCDC178Q5BJE1 867 aa12.87□□□□□ -0.35
DDX41-218ENST00000625286 DBF4BQ8NFT6 615 aa12.87□□□□□ -0.35
DDX41-218ENST00000625286 C17orf80Q9BSJ5 609 aa12.87□□□□□ -0.35
DDX41-218ENST00000625286 C1QTNF1Q9BXJ1 281 aa12.87□□□□□ -0.35
DDX41-218ENST00000625286 AMNQ9BXJ7 453 aa12.87□□□□□ -0.35
DDX41-218ENST00000625286 TAF6LQ9Y6J9 622 aa12.87□□□□□ -0.35
DDX41-218ENST00000625286 DOCK5Q9H7D0 1870 aa12.87□□□□□ -0.35
DDX41-218ENST00000625286 ZBTB5O15062 677 aa12.86□□□□□ -0.35
DDX41-218ENST00000625286 CYTH3O43739 400 aa12.86□□□□□ -0.35
DDX41-218ENST00000625286 GGPS1O95749 300 aa12.86□□□□□ -0.35
DDX41-218ENST00000625286 UBA1P22314 1058 aaKnown RBP12.86□□□□□ -0.35
DDX41-218ENST00000625286 MFAP1P55081 439 aaKnown RBP12.86□□□□□ -0.35
DDX41-218ENST00000625286 IKBKEQ14164 716 aa12.86□□□□□ -0.35
DDX41-218ENST00000625286 SERINC5Q86VE9 423 aa12.86□□□□□ -0.35
DDX41-218ENST00000625286 SPATA33Q96N06 139 aa12.86□□□□□ -0.35
DDX41-218ENST00000625286 TGS1Q96RS0 853 aaKnown RBP12.86□□□□□ -0.35
DDX41-218ENST00000625286 LMCD1Q9NZU5 365 aa12.86□□□□□ -0.35
DDX41-218ENST00000625286 PCDHA1Q9Y5I3 950 aa12.86□□□□□ -0.35
DDX41-218ENST00000625286 TRIOO75962 3097 aa12.86□□□□□ -0.35
DDX41-218ENST00000625286 LGR5O75473 907 aa12.85□□□□□ -0.35
DDX41-218ENST00000625286 PARNO95453 639 aaKnown RBP12.85□□□□□ -0.35
DDX41-218ENST00000625286 NT5C2P49902 561 aa12.85□□□□□ -0.35
DDX41-218ENST00000625286 MRPS9P82933 396 aaKnown RBP12.85□□□□□ -0.35
DDX41-218ENST00000625286 HTRA4P83105 476 aaPredicted RBP12.85□□□□□ -0.35
DDX41-218ENST00000625286 SEMA3FQ13275 785 aa12.85□□□□□ -0.35
DDX41-218ENST00000625286 IMMTQ16891 758 aaKnown RBP12.85□□□□□ -0.35
DDX41-218ENST00000625286 IFIT1BQ5T764 474 aaKnown RBP12.85□□□□□ -0.35
DDX41-218ENST00000625286 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.85□□□□□ -0.35
DDX41-218ENST00000625286 PIGSQ96S52 555 aa12.85□□□□□ -0.35
DDX41-218ENST00000625286 KATNAL1Q9BW62 490 aa12.85□□□□□ -0.35
DDX41-218ENST00000625286 RIOX1Q9H6W3 641 aa12.85□□□□□ -0.35
DDX41-218ENST00000625286 DIAPH3Q9NSV4 1193 aa12.85□□□□□ -0.35
DDX41-218ENST00000625286 FAM86C2PA6NEL3 165 aa12.84□□□□□ -0.35
DDX41-218ENST00000625286 RSPH10B2B2RC85 870 aa12.84□□□□□ -0.35
DDX41-218ENST00000625286 TREHO43280 583 aa12.84□□□□□ -0.35
DDX41-218ENST00000625286 RSPH10BP0C881 870 aa12.84□□□□□ -0.35
DDX41-218ENST00000625286 THPOP40225 353 aa12.84□□□□□ -0.35
DDX41-218ENST00000625286 PLEKHG4Q58EX7 1191 aa12.84□□□□□ -0.35
DDX41-218ENST00000625286 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
DDX41-218ENST00000625286 KRT23Q9C075 422 aa12.84□□□□□ -0.35
DDX41-218ENST00000625286 RWDD1Q9H446 243 aaPredicted RBP12.84□□□□□ -0.35
DDX41-218ENST00000625286 RNPEPQ9H4A4 650 aa12.84□□□□□ -0.35
DDX41-218ENST00000625286 UBE2ZQ9H832 354 aaPredicted RBP12.84□□□□□ -0.35
DDX41-218ENST00000625286 SUPT16HQ9Y5B9 1047 aaKnown RBP12.84□□□□□ -0.35
DDX41-218ENST00000625286 MUC6Q6W4X9 2439 aa12.83□□□□□ -0.35
DDX41-218ENST00000625286 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.83□□□□□ -0.36
DDX41-218ENST00000625286 PI4K2BG5E9Z4 385 aa12.83□□□□□ -0.36
DDX41-218ENST00000625286 H3BRB1 525 aa12.83□□□□□ -0.36
DDX41-218ENST00000625286 LGALS2P05162 132 aa12.83□□□□□ -0.36
DDX41-218ENST00000625286 SMIM10L2AP0DMW4 78 aa12.83□□□□□ -0.36
DDX41-218ENST00000625286 SMIM10L2BP0DMW5 78 aa12.83□□□□□ -0.36
DDX41-218ENST00000625286 PDE4AP27815 886 aa12.83□□□□□ -0.36
DDX41-218ENST00000625286 PTH1RQ03431 593 aa12.83□□□□□ -0.36
DDX41-218ENST00000625286 GRM4Q14833 912 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms