RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 LMCD1Q9NZU5 365 aa18.84■□□□□ 0.61
CD99-211ENST00000623253 TRIP12Q14669 1992 aaPredicted RBP18.84■□□□□ 0.61
CD99-211ENST00000623253 LINC01553A4QN01 128 aa18.83■□□□□ 0.6
CD99-211ENST00000623253 HAS3O00219 553 aa18.83■□□□□ 0.6
CD99-211ENST00000623253 PPFIA4O75335 1185 aa18.83■□□□□ 0.6
CD99-211ENST00000623253 THPOP40225 353 aa18.83■□□□□ 0.6
CD99-211ENST00000623253 HSD17B4P51659 736 aa18.83■□□□□ 0.6
CD99-211ENST00000623253 ERVK-21P61565 698 aa18.83■□□□□ 0.6
CD99-211ENST00000623253 CHD1LQ86WJ1 897 aa18.83■□□□□ 0.6
CD99-211ENST00000623253 PLEKHM2Q8IWE5 1019 aa18.83■□□□□ 0.6
CD99-211ENST00000623253 STAG2Q8N3U4 1231 aa18.83■□□□□ 0.6
CD99-211ENST00000623253 ZFP91Q96JP5 570 aaPredicted RBP18.83■□□□□ 0.6
CD99-211ENST00000623253 PDCD2LQ9BRP1 358 aa18.83■□□□□ 0.6
CD99-211ENST00000623253 LRFN3Q9BTN0 628 aa18.83■□□□□ 0.6
CD99-211ENST00000623253 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.6
CD99-211ENST00000623253 CTNNA3Q9UI47 895 aa18.83■□□□□ 0.6
CD99-211ENST00000623253 PCDHA1Q9Y5I3 950 aa18.83■□□□□ 0.6
CD99-211ENST00000623253 KLRF2D3W0D1 207 aa18.82■□□□□ 0.6
CD99-211ENST00000623253 LGR5O75473 907 aa18.82■□□□□ 0.6
CD99-211ENST00000623253 GGPS1O95749 300 aa18.82■□□□□ 0.6
CD99-211ENST00000623253 MAPK8IP2Q13387 824 aaPredicted RBP18.82■□□□□ 0.6
CD99-211ENST00000623253 TRIM71Q2Q1W2 868 aaKnown RBP18.82■□□□□ 0.6
CD99-211ENST00000623253 HSDL1Q3SXM5 330 aa18.82■□□□□ 0.6
CD99-211ENST00000623253 CELF3Q5SZQ8 465 aaKnown RBP18.82■□□□□ 0.6
CD99-211ENST00000623253 MYSM1Q5VVJ2 828 aa18.82■□□□□ 0.6
CD99-211ENST00000623253 TRAF7Q6Q0C0 670 aa18.82■□□□□ 0.6
CD99-211ENST00000623253 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.82■□□□□ 0.63e-12■■□□□ 12.3
CD99-211ENST00000623253 HOMER1Q86YM7 354 aa18.82■□□□□ 0.6
CD99-211ENST00000623253 CNNM2Q9H8M5 875 aa18.82■□□□□ 0.6
CD99-211ENST00000623253 RSPH10B2B2RC85 870 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 HIP1O00291 1037 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 OPLAHO14841 1288 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 RGS20O76081 388 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 AMHP03971 560 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 RSPH10BP0C881 870 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 HIC1Q14526 733 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 MBTPS1Q14703 1052 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 PGM5Q15124 567 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 TMEM31Q5JXX7 168 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 KCNV1Q6PIU1 500 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 MYOCDQ8IZQ8 938 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 DBF4BQ8NFT6 615 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 DSCC1Q9BVC3 393 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 MLXIPQ9HAP2 919 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 INSL6Q9Y581 213 aa18.81■□□□□ 0.6
CD99-211ENST00000623253 PTPRSQ13332 1948 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 EMSYQ7Z589 1322 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 COL4A4P53420 1690 aaPredicted RBP18.8■□□□□ 0.6
CD99-211ENST00000623253 ZBTB5O15062 677 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 PPP1R11O60927 126 aaPredicted RBP18.8■□□□□ 0.6
CD99-211ENST00000623253 SP2Q02086 613 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 STOX1Q6ZVD7 989 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 VSIG10LQ86VR7 867 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 FCHSD1Q86WN1 690 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 SMC5Q8IY18 1101 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 FBXO22Q8NEZ5 403 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 IL31RAQ8NI17 732 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 ATP6V0A1Q93050 837 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 C17orf80Q9BSJ5 609 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 OSBPL3Q9H4L5 887 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 UBE2ZQ9H832 354 aaPredicted RBP18.8■□□□□ 0.6
CD99-211ENST00000623253 HCN4Q9Y3Q4 1203 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 KIAA1217Q5T5P2 1943 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 NCOR1O75376 2440 aa18.8■□□□□ 0.6
CD99-211ENST00000623253 C17orf102A2RUQ5 167 aa18.79■□□□□ 0.6
CD99-211ENST00000623253 UBA1P22314 1058 aaKnown RBP18.79■□□□□ 0.6
CD99-211ENST00000623253 KCNA5P22460 613 aa18.79■□□□□ 0.6
CD99-211ENST00000623253 CCND2P30279 289 aa18.79■□□□□ 0.6
CD99-211ENST00000623253 SERINC5Q86VE9 423 aa18.79■□□□□ 0.6
CD99-211ENST00000623253 KHSRPQ92945 711 aaKnown RBP eCLIP18.79■□□□□ 0.6
CD99-211ENST00000623253 MAP3K20Q9NYL2 800 aaKnown RBP18.79■□□□□ 0.6
CD99-211ENST00000623253 FAM86C2PA6NEL3 165 aa18.78■□□□□ 0.6
CD99-211ENST00000623253 GCOM1H8Y6P7 765 aaPredicted RBP18.78■□□□□ 0.6
CD99-211ENST00000623253 POLR2MP0CAP2 368 aa18.78■□□□□ 0.6
CD99-211ENST00000623253 HOXD8P13378 290 aaPredicted RBP18.78■□□□□ 0.6
CD99-211ENST00000623253 GHRHRQ02643 423 aa18.78■□□□□ 0.6
CD99-211ENST00000623253 NUCB1Q02818 461 aa18.78■□□□□ 0.6
CD99-211ENST00000623253 GPKOWQ92917 476 aaPredicted RBP eCLIP18.78■□□□□ 0.6
CD99-211ENST00000623253 PIGSQ96S52 555 aa18.78■□□□□ 0.6
CD99-211ENST00000623253 C16orf70Q9BSU1 422 aa18.78■□□□□ 0.6
CD99-211ENST00000623253 MAD2L2Q9UI95 211 aa18.78■□□□□ 0.6
CD99-211ENST00000623253 H3BRB1 525 aa18.77■□□□□ 0.6
CD99-211ENST00000623253 NOP56O00567 594 aaKnown RBP18.77■□□□□ 0.6
CD99-211ENST00000623253 UPP2O95045 317 aa18.77■□□□□ 0.6
CD99-211ENST00000623253 IGHDP01880 384 aa18.77■□□□□ 0.6
CD99-211ENST00000623253 TGFB3P10600 412 aa18.77■□□□□ 0.6
CD99-211ENST00000623253 SEC23AQ15436 765 aa18.77■□□□□ 0.6
CD99-211ENST00000623253 CYB5R4Q7L1T6 521 aa18.77■□□□□ 0.6
CD99-211ENST00000623253 MTMR8Q96EF0 704 aa18.77■□□□□ 0.6
CD99-211ENST00000623253 TUT1Q9H6E5 874 aaKnown RBP18.77■□□□□ 0.6
CD99-211ENST00000623253 CD320Q9NPF0 282 aa18.77■□□□□ 0.6
CD99-211ENST00000623253 LAMA4Q16363 1823 aa18.77■□□□□ 0.59
CD99-211ENST00000623253 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.76■□□□□ 0.59
CD99-211ENST00000623253 PALM3A6NDB9 673 aaPredicted RBP18.76■□□□□ 0.59
CD99-211ENST00000623253 TREHO43280 583 aa18.76■□□□□ 0.59
CD99-211ENST00000623253 CTSHP09668 335 aa18.76■□□□□ 0.59
CD99-211ENST00000623253 SMIM10L2AP0DMW4 78 aa18.76■□□□□ 0.59
CD99-211ENST00000623253 SMIM10L2BP0DMW5 78 aa18.76■□□□□ 0.59
CD99-211ENST00000623253 TRDNQ13061 729 aa18.76■□□□□ 0.59
CD99-211ENST00000623253 TRAF1Q13077 416 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms