RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 MEIS1O00470 390 aa22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 SEPT4O43236 478 aa22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 ZNF865P0CJ78 1059 aaPredicted RBP22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 ITGB5P18084 799 aa22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 Q4G0T1 1027 aa22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 LHX8Q68G74 356 aa22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 CRISPLD2Q9H0B8 497 aa22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 ABHD16BQ9H3Z7 469 aa22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 JADE2Q9NQC1 790 aa22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 DDX20Q9UHI6 824 aaKnown RBP22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 ZHX1Q9UKY1 873 aaPredicted RBP22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 PCDHB6Q9Y5E3 794 aa22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 MKI67P46013 3256 aaKnown RBP22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 MYH15Q9Y2K3 1946 aa22.51■■□□□ 1.19
PDLIM2-221ENST00000622702 RGS20O76081 388 aa22.5■■□□□ 1.19
PDLIM2-221ENST00000622702 ACVR2BQ13705 512 aa22.5■■□□□ 1.19
PDLIM2-221ENST00000622702 NBR1Q14596 966 aa22.5■■□□□ 1.19
PDLIM2-221ENST00000622702 CYP2W1Q8TAV3 490 aa22.5■■□□□ 1.19
PDLIM2-221ENST00000622702 LENG9Q96B70 501 aa22.5■■□□□ 1.19
PDLIM2-221ENST00000622702 USP28Q96RU2 1077 aa22.5■■□□□ 1.19
PDLIM2-221ENST00000622702 RTEL1Q9NZ71 1219 aa22.5■■□□□ 1.19
PDLIM2-221ENST00000622702 DDX25Q9UHL0 483 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-221ENST00000622702 MSCO60682 206 aa22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 MCM7P33993 719 aa22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 RGS19P49795 217 aa22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 SETQ01105 290 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 DNM1Q05193 864 aaKnown RBP22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 ZNF174Q15697 407 aa22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 FOXD4L6Q3SYB3 417 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 GNPTABQ3T906 1256 aa22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 PRR16Q569H4 304 aa22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 ANO1Q5XXA6 986 aa22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 FOXD4L3Q6VB84 417 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 GPRASP2Q96D09 838 aa22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 ZFP91Q96JP5 570 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 KATNBL1Q9H079 304 aa22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 VTA1Q9NP79 307 aa22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 POLR3EQ9NVU0 708 aa22.49■■□□□ 1.19
PDLIM2-221ENST00000622702 MAFGO15525 162 aa22.48■■□□□ 1.19
PDLIM2-221ENST00000622702 SLC37A4O43826 429 aa22.48■■□□□ 1.19
PDLIM2-221ENST00000622702 BMP15O95972 392 aa22.48■■□□□ 1.19
PDLIM2-221ENST00000622702 FRMPD3Q5JV73 1810 aa22.48■■□□□ 1.19
PDLIM2-221ENST00000622702 NLRX1Q86UT6 975 aa22.48■■□□□ 1.19
PDLIM2-221ENST00000622702 PLA2G4DQ86XP0 818 aa22.48■■□□□ 1.19
PDLIM2-221ENST00000622702 TNPO1Q92973 898 aaKnown RBP22.48■■□□□ 1.19
PDLIM2-221ENST00000622702 NEMFO60524 1076 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 CAPN2P17655 700 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 ICAM3P32942 547 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 NASPP49321 788 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 SF3A1Q15459 793 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 EEPD1Q7L9B9 569 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 CDHR1Q96JP9 859 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 WDR11Q9BZH6 1224 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 FTOQ9C0B1 505 aaKnown RBP eCLIP22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 CFAP45Q9UL16 551 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 OGDHLQ9ULD0 1010 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 CEP131Q9UPN4 1083 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 CLIC4Q9Y696 253 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 FIBPO43427 364 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 AKR1A1P14550 325 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 KRT85P78386 507 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 MTMR1Q13613 665 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 CCDC144BQ3MJ40 725 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 FBXO16Q8IX29 292 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 C4orf32Q8N8J7 132 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 KCNMB3Q9NPA1 279 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 KCNH7Q9NS40 1196 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 TFIP11Q9UBB9 837 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 FAM184BQ9ULE4 1060 aa22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 MORC2Q9Y6X9 1032 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-221ENST00000622702 SPATA31C2B4DYI2 1134 aa22.46■■□□□ 1.19
PDLIM2-221ENST00000622702 TBX3O15119 743 aa22.46■■□□□ 1.19
PDLIM2-221ENST00000622702 SEMA3FQ13275 785 aa22.46■■□□□ 1.19
PDLIM2-221ENST00000622702 PTPAQ15257 358 aa22.46■■□□□ 1.19
PDLIM2-221ENST00000622702 POTEDQ86YR6 584 aa22.46■■□□□ 1.19
PDLIM2-221ENST00000622702 ETNPPLQ8TBG4 499 aa22.46■■□□□ 1.19
PDLIM2-221ENST00000622702 KIAA1217Q5T5P2 1943 aa22.45■■□□□ 1.19
PDLIM2-221ENST00000622702 RBM47A0AV96 593 aaKnown RBP22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 LAD1O00515 517 aa22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 YEATS4O95619 227 aa22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 ARP10275 920 aa22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 TGFB3P10600 412 aa22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 ATP2C1P98194 919 aaPredicted RBP22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 PTGDRQ13258 359 aa22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 TAPT1Q6NXT6 567 aa22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 KCNV1Q6PIU1 500 aa22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 SEPT14Q6ZU15 432 aa22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 CHAMP1Q96JM3 812 aa22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 FAM20AQ96MK3 541 aa22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 MTMR9Q96QG7 549 aa22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 TMEM60Q9H2L4 133 aa22.45■■□□□ 1.18
PDLIM2-221ENST00000622702 MSH4O15457 936 aa22.44■■□□□ 1.18
PDLIM2-221ENST00000622702 RARBP10826 455 aa22.44■■□□□ 1.18
PDLIM2-221ENST00000622702 CEBPZQ03701 1054 aaKnown RBP22.44■■□□□ 1.18
PDLIM2-221ENST00000622702 SLC39A14Q15043 492 aa22.44■■□□□ 1.18
PDLIM2-221ENST00000622702 CALCRLQ16602 461 aa22.44■■□□□ 1.18
PDLIM2-221ENST00000622702 CLEC17AQ6ZS10 378 aa22.44■■□□□ 1.18
PDLIM2-221ENST00000622702 ANKLE1Q8NAG6 615 aa22.44■■□□□ 1.18
PDLIM2-221ENST00000622702 LINC00301Q8NCQ3 95 aa22.44■■□□□ 1.18
PDLIM2-221ENST00000622702 SCFD2Q8WU76 684 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms