RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 SP2Q02086 613 aa10.81□□□□□ -0.68
TARDBP-227ENST00000622057 TAP1Q03518 808 aa10.81□□□□□ -0.68
TARDBP-227ENST00000622057 C1QBPQ07021 282 aaKnown RBP10.81□□□□□ -0.68
TARDBP-227ENST00000622057 GRM4Q14833 912 aa10.81□□□□□ -0.68
TARDBP-227ENST00000622057 WTAPQ15007 396 aa10.81□□□□□ -0.68
TARDBP-227ENST00000622057 HSDL1Q3SXM5 330 aa10.81□□□□□ -0.68
TARDBP-227ENST00000622057 CELF3Q5SZQ8 465 aaKnown RBP10.81□□□□□ -0.68
TARDBP-227ENST00000622057 MYSM1Q5VVJ2 828 aa10.81□□□□□ -0.68
TARDBP-227ENST00000622057 KRT40Q6A162 431 aa10.81□□□□□ -0.68
TARDBP-227ENST00000622057 KCNV1Q6PIU1 500 aa10.81□□□□□ -0.68
TARDBP-227ENST00000622057 RALYLQ86SE5 291 aaKnown RBP10.81□□□□□ -0.68
TARDBP-227ENST00000622057 SAMD3Q8N6K7 520 aa10.81□□□□□ -0.68
TARDBP-227ENST00000622057 NCOA7Q8NI08 942 aa10.81□□□□□ -0.68
TARDBP-227ENST00000622057 RIOX1Q9H6W3 641 aa10.81□□□□□ -0.68
TARDBP-227ENST00000622057 SENP2Q9HC62 589 aa10.81□□□□□ -0.68
TARDBP-227ENST00000622057 CUL9Q8IWT3 2517 aa10.81□□□□□ -0.68
TARDBP-227ENST00000622057 SCN10AQ9Y5Y9 1956 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 E7EWF7 191 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 HAS3O00219 553 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 PARNO95453 639 aaKnown RBP10.8□□□□□ -0.68
TARDBP-227ENST00000622057 F2P00734 622 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 CHMLP26374 656 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 CCND2P30279 289 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 DEFB103AP81534 67 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 GHRHRQ02643 423 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 TFF2Q03403 129 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 TRAF1Q13077 416 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 PTK7Q13308 1070 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 IKBKEQ14164 716 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 SART3Q15020 963 aaKnown RBP10.8□□□□□ -0.68
TARDBP-227ENST00000622057 SLC35G1Q2M3R5 365 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 ZNF618Q5T7W0 954 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 FAM117BQ6P1L5 589 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 CNKSR3Q6P9H4 555 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 SPRED2Q7Z698 418 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 IL31RAQ8NI17 732 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 GPKOWQ92917 476 aaPredicted RBP eCLIP10.8□□□□□ -0.68
TARDBP-227ENST00000622057 RTEL1Q9NZ71 1219 aa10.8□□□□□ -0.68
TARDBP-227ENST00000622057 MYO9BQ13459 2157 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 SCN5AQ14524 2016 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 PNMA6FA0A0J9YX94 578 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 LCHNA4D1U4 455 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 CYTH3O43739 400 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 CXCL10P02778 98 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 TGFB3P10600 412 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 POU3F3P20264 500 aaPredicted RBP10.79□□□□□ -0.68
TARDBP-227ENST00000622057 UBA1P22314 1058 aaKnown RBP10.79□□□□□ -0.68
TARDBP-227ENST00000622057 GRB10Q13322 594 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 HIC1Q14526 733 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 AAK1Q2M2I8 961 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 TCTN1Q2MV58 587 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 CATIPQ7Z7H3 387 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 WNT8BQ93098 351 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 NECAB3Q96P71 396 aaPredicted RBP10.79□□□□□ -0.68
TARDBP-227ENST00000622057 BCAS3Q9H6U6 928 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 TAF6LQ9Y6J9 622 aa10.79□□□□□ -0.68
TARDBP-227ENST00000622057 ABHD14A-ACY1A0A1B0GW23 586 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 C17orf102A2RUQ5 167 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 RSPH10B2B2RC85 870 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 NOP56O00567 594 aaKnown RBP10.78□□□□□ -0.68
TARDBP-227ENST00000622057 RSPH10BP0C881 870 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 BMP1P13497 986 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 THPOP40225 353 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 KCNQ1P51787 676 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 IRX6P78412 446 aaPredicted RBP10.78□□□□□ -0.68
TARDBP-227ENST00000622057 RBL2Q08999 1139 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 TROAPQ12815 778 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 TRIM71Q2Q1W2 868 aaKnown RBP10.78□□□□□ -0.68
TARDBP-227ENST00000622057 GNPTABQ3T906 1256 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.78□□□□□ -0.681e-28■■■■■ 32.6
TARDBP-227ENST00000622057 IGDCC4Q8TDY8 1250 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 ATP6V0A1Q93050 837 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 RAD9AQ99638 391 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 C16orf70Q9BSU1 422 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 MTUS1Q9ULD2 1270 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 CHD9Q3L8U1 2897 aa10.78□□□□□ -0.68
TARDBP-227ENST00000622057 GBF1Q92538 1859 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 H3BRB1 525 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 TREHO43280 583 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 EFCAB14O75071 495 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 LGR5O75473 907 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 GJB5O95377 273 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 COL9A1P20849 921 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 MRPS9P82933 396 aaKnown RBP10.77□□□□□ -0.69
TARDBP-227ENST00000622057 NEDD9Q14511 834 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 UTP14CQ5TAP6 766 aaKnown RBP10.77□□□□□ -0.69
TARDBP-227ENST00000622057 TRAF7Q6Q0C0 670 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 CYFIP1Q7L576 1253 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 DBF4BQ8NFT6 615 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 SMARCC2Q8TAQ2 1214 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 CUL5Q93034 780 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 MYL10Q9BUA6 226 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 RNPEPQ9H4A4 650 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 TUT1Q9H6E5 874 aaKnown RBP10.77□□□□□ -0.69
TARDBP-227ENST00000622057 COG5Q9UP83 839 aa10.77□□□□□ -0.69
TARDBP-227ENST00000622057 SPATA31C2B4DYI2 1134 aa10.76□□□□□ -0.69
TARDBP-227ENST00000622057 SGSM2O43147 1006 aa10.76□□□□□ -0.69
TARDBP-227ENST00000622057 LPXNO60711 386 aa10.76□□□□□ -0.69
TARDBP-227ENST00000622057 LGALS2P05162 132 aa10.76□□□□□ -0.69
TARDBP-227ENST00000622057 SMIM10L2AP0DMW4 78 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms