RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 CYP3A7P24462 503 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 RFC4P35249 363 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 CYLC1P35663 651 aaPredicted RBP3.59□□□□□ -1.83
U1.39-201ENST00000621562 TECP42680 631 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 TXKP42681 527 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 SLC1A4P43007 532 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 HNRNPH2P55795 449 aaKnown RBP3.59□□□□□ -1.83
U1.39-201ENST00000621562 TUBB4BP68371 445 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 PIP4K2BP78356 416 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 KRT83P78385 493 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 CYP27A1Q02318 531 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 C2orf54Q08AI8 447 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 NFIAQ12857 509 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 SEPT2Q15019 361 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 LRRC41Q15345 812 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 CALCRLQ16602 461 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 VWA3BQ502W6 1294 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 ARSHQ5FYA8 562 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 FAM26FQ5R3K3 315 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 CCDC122Q5T0U0 273 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 TRAPPC3LQ5T215 181 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 TAF3Q5VWG9 929 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 APOBEC3HQ6NTF7 200 aaKnown RBP3.59□□□□□ -1.83
U1.39-201ENST00000621562 CDC42EP5Q6NZY7 148 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 MOXD1Q6UVY6 613 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.59□□□□□ -1.83
U1.39-201ENST00000621562 SV2BQ7L1I2 683 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 SH3BP5LQ7L8J4 393 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 SIAH1Q8IUQ4 282 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 TRIM59Q8IWR1 403 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 AMOTL1Q8IY63 956 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 PROM2Q8N271 834 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 TXLNBQ8N3L3 684 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 CCDC155Q8N6L0 562 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 EHBP1Q8NDI1 1231 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 ETNPPLQ8TBG4 499 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 FAM71BQ8TC56 605 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 SNX29Q8TEQ0 813 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 COG1Q8WTW3 980 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 TBC1D22AQ8WUA7 517 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 DDX12PQ92771 950 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 RPGRQ92834 1020 aaKnown RBP3.59□□□□□ -1.83
U1.39-201ENST00000621562 GJA10Q969M2 543 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 EEF2KMTQ96G04 330 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 CALML4Q96GE6 196 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 RBM17Q96I25 401 aaKnown RBP3.59□□□□□ -1.83
U1.39-201ENST00000621562 RPGRIP1Q96KN7 1286 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 CEP63Q96MT8 703 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 INPP4AQ96PE3 977 aaPredicted RBP3.59□□□□□ -1.83
U1.39-201ENST00000621562 SH3GL2Q99962 352 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 NOC4LQ9BVI4 516 aaKnown RBP3.59□□□□□ -1.83
U1.39-201ENST00000621562 EDEM3Q9BZQ6 932 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 GBP3Q9H0R5 595 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 KCTD10Q9H3F6 313 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 NDST4Q9H3R1 872 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 ZNF287Q9HBT7 754 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 RNF216Q9NWF9 866 aaPredicted RBP3.59□□□□□ -1.83
U1.39-201ENST00000621562 SMARCAL1Q9NZC9 954 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 EHD2Q9NZN4 543 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 CALCOCO1Q9P1Z2 691 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 CEP72Q9P209 647 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 SEC63Q9UGP8 760 aaKnown RBP3.59□□□□□ -1.83
U1.39-201ENST00000621562 SWAP70Q9UH65 585 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 DMGDHQ9UI17 866 aaKnown RBP3.59□□□□□ -1.83
U1.39-201ENST00000621562 AJAP1Q9UKB5 411 aaPredicted RBP3.59□□□□□ -1.83
U1.39-201ENST00000621562 ADAM21Q9UKJ8 722 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 SNX12Q9UMY4 172 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 MTMR7Q9Y216 660 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 SUGT1Q9Y2Z0 365 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 PCDHAC2Q9Y5I4 1007 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 SAR1BQ9Y6B6 198 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 GRIN2DO15399 1336 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 SPATA31A6Q5VVP1 1343 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 ATRNL1Q5VV63 1379 aa3.59□□□□□ -1.83
U1.39-201ENST00000621562 RALGAPA2Q2PPJ7 1873 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 PLXNA1Q9UIW2 1896 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 MYO18AQ92614 2054 aaKnown RBP3.58□□□□□ -1.84
U1.39-201ENST00000621562 NPHP3-ACAD11A0A0J9YXS1 232 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 POTEB3A0JP26 581 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 CCDC66A2RUB6 948 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 POTECB2RU33 542 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 USP17L10C9JJH3 530 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 E9PMD0 336 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 MEIS2O14770 477 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 PPEF1O14829 653 aaPredicted RBP3.58□□□□□ -1.84
U1.39-201ENST00000621562 ZBTB5O15062 677 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 NCK2O43639 380 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 KRT86O43790 486 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 RNF40O75150 1001 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 MED24O75448 989 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 CLSTN1O94985 981 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 TTLL1O95922 423 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 SPATA31C1P0DKV0 1188 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 IDEP14735 1019 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 PRLRP16471 622 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 TAL1P17542 331 aaPredicted RBP3.58□□□□□ -1.84
U1.39-201ENST00000621562 CYP11B2P19099 503 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 TRIM21P19474 475 aaKnown RBP3.58□□□□□ -1.84
U1.39-201ENST00000621562 POLD1P28340 1107 aa3.58□□□□□ -1.84
U1.39-201ENST00000621562 ACTN2P35609 894 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms