RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 C6orf222P0C671 652 aaPredicted RBP16.34■□□□□ 0.21
CBWD3-217ENST00000621474 TGFB3P10600 412 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 BEX3Q00994 111 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 ARRDC4Q8NCT1 418 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 FBXO18Q8NFZ0 1043 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 TBCKQ8TEA7 893 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 MXRA8Q9BRK3 442 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 EHMT1Q9H9B1 1298 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 JADE2Q9NQC1 790 aa16.34■□□□□ 0.21
CBWD3-217ENST00000621474 FAM205CA6NFA0 338 aa16.33■□□□□ 0.2
CBWD3-217ENST00000621474 BTBD18B2RXH4 712 aa16.33■□□□□ 0.2
CBWD3-217ENST00000621474 FIBPO43427 364 aa16.33■□□□□ 0.2
CBWD3-217ENST00000621474 ATP9AO75110 1047 aa16.33■□□□□ 0.2
CBWD3-217ENST00000621474 GJB2P29033 226 aa16.33■□□□□ 0.2
CBWD3-217ENST00000621474 GUCY1B3Q02153 619 aa16.33■□□□□ 0.2
CBWD3-217ENST00000621474 GNPTABQ3T906 1256 aa16.33■□□□□ 0.2
CBWD3-217ENST00000621474 CEP55Q53EZ4 464 aa16.33■□□□□ 0.2
CBWD3-217ENST00000621474 RNF180Q86T96 592 aa16.33■□□□□ 0.2
CBWD3-217ENST00000621474 EMID1Q96A84 441 aaPredicted RBP16.33■□□□□ 0.2
CBWD3-217ENST00000621474 LENG9Q96B70 501 aa16.33■□□□□ 0.2
CBWD3-217ENST00000621474 GPRASP2Q96D09 838 aa16.33■□□□□ 0.2
CBWD3-217ENST00000621474 C8orf76Q96K31 380 aa16.33■□□□□ 0.2
CBWD3-217ENST00000621474 SCN10AQ9Y5Y9 1956 aa16.33■□□□□ 0.2
CBWD3-217ENST00000621474 MEIS1O00470 390 aa16.32■□□□□ 0.2
CBWD3-217ENST00000621474 MYCNP04198 464 aaPredicted RBP16.32■□□□□ 0.2
CBWD3-217ENST00000621474 KCNA2P16389 499 aa16.32■□□□□ 0.2
CBWD3-217ENST00000621474 CIITAP33076 1130 aa16.32■□□□□ 0.2
CBWD3-217ENST00000621474 KRT2P35908 639 aa16.32■□□□□ 0.2
CBWD3-217ENST00000621474 MTMR1Q13613 665 aa16.32■□□□□ 0.2
CBWD3-217ENST00000621474 KCNA10Q16322 511 aa16.32■□□□□ 0.2
CBWD3-217ENST00000621474 FSCN1Q16658 493 aaKnown RBP16.32■□□□□ 0.2
CBWD3-217ENST00000621474 MYSM1Q5VVJ2 828 aa16.32■□□□□ 0.2
CBWD3-217ENST00000621474 KCNV1Q6PIU1 500 aa16.32■□□□□ 0.2
CBWD3-217ENST00000621474 DIS3L2Q8IYB7 885 aaKnown RBP16.32■□□□□ 0.2
CBWD3-217ENST00000621474 FAM184AQ8NB25 1140 aa16.32■□□□□ 0.2
CBWD3-217ENST00000621474 OR6J1Q8NGC5 347 aa16.32■□□□□ 0.2
CBWD3-217ENST00000621474 KCNH7Q9NS40 1196 aa16.32■□□□□ 0.2
CBWD3-217ENST00000621474 PHF24Q9UPV7 400 aa16.32■□□□□ 0.2
CBWD3-217ENST00000621474 TELO2Q9Y4R8 837 aa16.32■□□□□ 0.2
CBWD3-217ENST00000621474 A6NJR5 290 aa16.31■□□□□ 0.2
CBWD3-217ENST00000621474 GH1P01241 217 aa16.31■□□□□ 0.2
CBWD3-217ENST00000621474 ARP10275 920 aa16.31■□□□□ 0.2
CBWD3-217ENST00000621474 INF2Q27J81 1249 aa16.31■□□□□ 0.2
CBWD3-217ENST00000621474 HSDL1Q3SXM5 330 aa16.31■□□□□ 0.2
CBWD3-217ENST00000621474 GNASQ5JWF2 1037 aa16.31■□□□□ 0.2
CBWD3-217ENST00000621474 CELF3Q5SZQ8 465 aaKnown RBP16.31■□□□□ 0.2
CBWD3-217ENST00000621474 PIK3AP1Q6ZUJ8 805 aa16.31■□□□□ 0.2
CBWD3-217ENST00000621474 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-217ENST00000621474 KBTBD13C9JR72 458 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 GGPS1O95749 300 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 ASGR1P07306 291 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 ACLYP53396 1101 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 NONOQ15233 471 aaKnown RBP eCLIP16.3■□□□□ 0.2
CBWD3-217ENST00000621474 KRT25Q7Z3Z0 450 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 NLRX1Q86UT6 975 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 SENP7Q9BQF6 1050 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 TSEN34Q9BSV6 310 aaKnown RBP16.3■□□□□ 0.2
CBWD3-217ENST00000621474 AP5M1Q9H0R1 490 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 C11orf49Q9H6J7 331 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 SPC25Q9HBM1 224 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 PDE4DIPQ5VU43 2346 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 WDR81Q562E7 1941 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 A0A1W2PQ45 241 aaPredicted RBP16.3■□□□□ 0.2
CBWD3-217ENST00000621474 A0A1W2PQY0 241 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 MAFGO15525 162 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 SORBS3O60504 671 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 USP11P51784 963 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 TRIM29Q14134 588 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 NIPA1Q7RTP0 329 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 NECAB2Q7Z6G3 386 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 AFG1LQ8WV93 481 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 INTS4Q96HW7 963 aaKnown RBP16.3■□□□□ 0.2
CBWD3-217ENST00000621474 SENP6Q9GZR1 1112 aaPredicted RBP16.3■□□□□ 0.2
CBWD3-217ENST00000621474 SMC3Q9UQE7 1217 aa16.3■□□□□ 0.2
CBWD3-217ENST00000621474 MOXD2PA6NHM9 499 aa16.29■□□□□ 0.2
CBWD3-217ENST00000621474 KIF28PB7ZC32 967 aa16.29■□□□□ 0.2
CBWD3-217ENST00000621474 WNT7AO00755 349 aa16.29■□□□□ 0.2
CBWD3-217ENST00000621474 TDP2O95551 362 aa16.29■□□□□ 0.2
CBWD3-217ENST00000621474 MMP3P08254 477 aa16.29■□□□□ 0.2
CBWD3-217ENST00000621474 HOXD8P13378 290 aaPredicted RBP16.29■□□□□ 0.2
CBWD3-217ENST00000621474 ITGB3BPQ13352 177 aaPredicted RBP16.29■□□□□ 0.2
CBWD3-217ENST00000621474 CXCL17Q6UXB2 119 aa16.29■□□□□ 0.2
CBWD3-217ENST00000621474 CYFIP1Q7L576 1253 aa16.29■□□□□ 0.2
CBWD3-217ENST00000621474 DHX37Q8IY37 1157 aaKnown RBP16.29■□□□□ 0.2
CBWD3-217ENST00000621474 PCSK9Q8NBP7 692 aaKnown RBP16.29■□□□□ 0.2
CBWD3-217ENST00000621474 PPTC7Q8NI37 304 aa16.29■□□□□ 0.2
CBWD3-217ENST00000621474 FERMT2Q96AC1 680 aa16.29■□□□□ 0.2
CBWD3-217ENST00000621474 CDHR1Q96JP9 859 aa16.29■□□□□ 0.2
CBWD3-217ENST00000621474 MBOAT7Q96N66 472 aa16.29■□□□□ 0.2
CBWD3-217ENST00000621474 AGO4Q9HCK5 861 aaKnown RBP16.29■□□□□ 0.2
CBWD3-217ENST00000621474 CYP3A7-CYP3A51PA0A087WV96 503 aa16.28■□□□□ 0.2
CBWD3-217ENST00000621474 CCDC194A0A1B0GVG4 234 aa16.28■□□□□ 0.2
CBWD3-217ENST00000621474 CYP3A7P24462 503 aa16.28■□□□□ 0.2
CBWD3-217ENST00000621474 CPT1AP50416 773 aa16.28■□□□□ 0.2
CBWD3-217ENST00000621474 PURAQ00577 322 aaKnown RBP16.28■□□□□ 0.2
CBWD3-217ENST00000621474 LAMC2Q13753 1193 aa16.28■□□□□ 0.2
CBWD3-217ENST00000621474 NEDD9Q14511 834 aa16.28■□□□□ 0.2
CBWD3-217ENST00000621474 PRR16Q569H4 304 aa16.28■□□□□ 0.2
CBWD3-217ENST00000621474 METTL7BQ6UX53 244 aa16.28■□□□□ 0.2
CBWD3-217ENST00000621474 PLA2G4DQ86XP0 818 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms