RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SUPT20HQ8NEM7 779 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 UHMK1Q8TAS1 419 aaKnown RBP7.65□□□□□ -1.18
NEDD9-216ENST00000620854 TBC1D22AQ8WUA7 517 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 TBC1D5Q92609 795 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 DYNLL2Q96FJ2 89 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 NUP58Q9BVL2 599 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 VEZTQ9HBM0 779 aa7.65□□□□□ -1.18
NEDD9-216ENST00000620854 COL5A2P05997 1499 aaPredicted RBP7.65□□□□□ -1.19
NEDD9-216ENST00000620854 CNTNAP5Q8WYK1 1306 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 MYH2Q9UKX2 1941 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 USP17L3A6NCW0 530 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 USP17L4A6NCW7 530 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 CPP00450 1065 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 POLR2FP61218 127 aaKnown RBP7.65□□□□□ -1.19
NEDD9-216ENST00000620854 TFAP4Q01664 338 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 RAPGEF1Q13905 1077 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 KIAA0753Q2KHM9 967 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 MIIPQ5JXC2 388 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 USP17L1Q7RTZ2 530 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 FAM114A1Q8IWE2 563 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 GIMAP8Q8ND71 665 aaPredicted RBP7.65□□□□□ -1.19
NEDD9-216ENST00000620854 BANK1Q8NDB2 785 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 ARHGEF1Q92888 912 aaKnown RBP7.65□□□□□ -1.19
NEDD9-216ENST00000620854 PACSIN1Q9BY11 444 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 KLC4Q9NSK0 619 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 RBM28Q9NW13 759 aaKnown RBP7.65□□□□□ -1.19
NEDD9-216ENST00000620854 SUFUQ9UMX1 484 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 RGPD5Q99666 1765 aa7.65□□□□□ -1.19
NEDD9-216ENST00000620854 ZNF804BA4D1E1 1349 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 CEP104O60308 925 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 MYCNP04198 464 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-216ENST00000620854 MMP10P09238 476 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 USP17L8P0C7I0 530 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 SPRED3Q2MJR0 410 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 SMIM5Q71RC9 77 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 CCDC13Q8IYE1 715 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 MYCBPAPQ8TBZ2 947 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 CASKIN2Q8WXE0 1202 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 N4BP2L2Q92802 583 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-216ENST00000620854 TSGA10Q9BZW7 698 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 TRIM9Q9C026 710 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 TTYH3Q9C0H2 523 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 EPN3Q9H201 632 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 SEMA6BQ9H3T3 888 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 PLAGL2Q9UPG8 496 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 PHF20L1A8MW92 1017 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 TRAF5O00463 557 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 BBOX1O75936 387 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 FGFR2P21802 821 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 KLRC1P26715 233 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 CTNNA1P35221 906 aaKnown RBP7.64□□□□□ -1.19
NEDD9-216ENST00000620854 TTLL12Q14166 644 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-216ENST00000620854 RBM26Q5T8P6 1007 aaKnown RBP7.64□□□□□ -1.19
NEDD9-216ENST00000620854 KLHDC7AQ5VTJ3 777 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 ALS2CLQ60I27 953 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 MICALCLQ6ZW33 695 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 HAUS2Q9NVX0 235 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 GGT7Q9UJ14 662 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 ADAMTSL3P82987 1691 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 C4AP0C0L4 1744 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 C4BP0C0L5 1744 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 PPIP5K2O43314 1243 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 RAD51CO43502 376 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 RHOBTB3O94955 611 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 TNNI2P48788 182 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 GTF2IP78347 998 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 PFKFB3Q16875 520 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-216ENST00000620854 MFSD14BQ5SR56 506 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 CPLX4Q7Z7G2 160 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 SLC44A5Q8NCS7 719 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 MDM1Q8TC05 714 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 CNKSR2Q8WXI2 1034 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 DPH5Q9H2P9 285 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 BIN2Q9UBW5 565 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-216ENST00000620854 NOVA2Q9UNW9 492 aaKnown RBP7.64□□□□□ -1.19
NEDD9-216ENST00000620854 MYH6P13533 1939 aa7.64□□□□□ -1.19
NEDD9-216ENST00000620854 BICDL2A1A5D9 508 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 EIF4E1BA6NMX2 242 aaKnown RBP7.63□□□□□ -1.19
NEDD9-216ENST00000620854 OPLAHO14841 1288 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 SKAP2O75563 359 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-216ENST00000620854 NF2P35240 595 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 MDH1P40925 334 aaKnown RBP7.63□□□□□ -1.19
NEDD9-216ENST00000620854 PAK2Q13177 524 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 PTGISQ16647 500 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 VWA3BQ502W6 1294 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 IQCKQ8N0W5 287 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 PRPF38AQ8NAV1 312 aaKnown RBP7.63□□□□□ -1.19
NEDD9-216ENST00000620854 PNMA1Q8ND90 353 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 PLA2G12BQ9BX93 195 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 DDX47Q9H0S4 455 aaKnown RBP7.63□□□□□ -1.19
NEDD9-216ENST00000620854 ODF2LQ9ULJ1 636 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 LEMD3Q9Y2U8 911 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 DCDC2CA8MYV0 355 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 QPCTQ16769 361 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 SWT1Q5T5J6 900 aaKnown RBP7.63□□□□□ -1.19
NEDD9-216ENST00000620854 SYCP3Q8IZU3 236 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 C4orf32Q8N8J7 132 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 FAM133AQ8N9E0 248 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 KIAA0895Q8NCT3 520 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 ZKSCAN4Q969J2 545 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms