RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 USP17L6PQ6QN14 398 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 CASC1Q6TDU7 716 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 RETREG2Q8NC44 543 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 PPTC7Q8NI37 304 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 CTCFLQ8NI51 663 aaPredicted RBP13.16□□□□□ -0.3
LINC00649-218ENST00000620580 MTIF3Q9H2K0 278 aaKnown RBP13.16□□□□□ -0.3
LINC00649-218ENST00000620580 ANO2Q9NQ90 1003 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 RTEL1Q9NZ71 1219 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 TELO2Q9Y4R8 837 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 HAS3O00219 553 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 PITPNM1O00562 1244 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 DDAH1O94760 285 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 ATP2A2P16615 1042 aaKnown RBP13.15□□□□□ -0.3
LINC00649-218ENST00000620580 MCM5P33992 734 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 SEMA3FQ13275 785 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 BFSP2Q13515 415 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 MFSD10Q14728 455 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 RAB30Q15771 203 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 KIAA0753Q2KHM9 967 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 NFXL1Q6ZNB6 911 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 SESTD1Q86VW0 696 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 CCDC82Q8N4S0 544 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 SAMD3Q8N6K7 520 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 PPM1EQ8WY54 764 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 WNT8BQ93098 351 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 SPATA33Q96N06 139 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 FTOQ9C0B1 505 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC00649-218ENST00000620580 PRDM6Q9NQX0 595 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 GTF2IRD1Q9UHL9 959 aa13.15□□□□□ -0.3
LINC00649-218ENST00000620580 CCDC69A6NI79 296 aa13.14□□□□□ -0.31
LINC00649-218ENST00000620580 MEIS2O14770 477 aa13.14□□□□□ -0.31
LINC00649-218ENST00000620580 F2P00734 622 aa13.14□□□□□ -0.31
LINC00649-218ENST00000620580 HOXD8P13378 290 aaPredicted RBP13.14□□□□□ -0.31
LINC00649-218ENST00000620580 TCTN1Q2MV58 587 aa13.14□□□□□ -0.31
LINC00649-218ENST00000620580 C7orf31Q8N865 590 aa13.14□□□□□ -0.31
LINC00649-218ENST00000620580 RRP36Q96EU6 259 aaKnown RBP13.14□□□□□ -0.31
LINC00649-218ENST00000620580 TMEM87BQ96K49 555 aa13.14□□□□□ -0.31
LINC00649-218ENST00000620580 TCEANC2Q96MN5 208 aa13.14□□□□□ -0.31
LINC00649-218ENST00000620580 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
LINC00649-218ENST00000620580 SPZ1Q9BXG8 430 aa13.14□□□□□ -0.31
LINC00649-218ENST00000620580 SLC28A3Q9HAS3 691 aa13.14□□□□□ -0.31
LINC00649-218ENST00000620580 PPFIA4O75335 1185 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 ARHGEF15O94989 841 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 PFKMP08237 780 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 KIF5BP33176 963 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 RFC2P35250 354 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 LIFRP42702 1097 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 TRAF1Q13077 416 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 BMP2KLQ5H9B9 411 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 KCNV1Q6PIU1 500 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 TMCO2Q7Z6W1 182 aaPredicted RBP13.13□□□□□ -0.31
LINC00649-218ENST00000620580 RASEFQ8IZ41 740 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 C16orf70Q9BSU1 422 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 MTA3Q9BTC8 594 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 MLXIPQ9HAP2 919 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
LINC00649-218ENST00000620580 DOCK5Q9H7D0 1870 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 PRRC2BQ5JSZ5 2229 aaKnown RBP13.12□□□□□ -0.31
LINC00649-218ENST00000620580 SPATA31C2B4DYI2 1134 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 RFXAPO00287 272 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 NBNO60934 754 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 TGFB3P10600 412 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 CKBP12277 381 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 ACTN1P12814 892 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 SELPP16109 830 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 IGFBP4P22692 258 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 SMARCA1P28370 1054 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 CCDC85BQ15834 202 aaPredicted RBP13.12□□□□□ -0.31
LINC00649-218ENST00000620580 TRIM71Q2Q1W2 868 aaKnown RBP13.12□□□□□ -0.31
LINC00649-218ENST00000620580 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 TRAF7Q6Q0C0 670 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 LRRC8DQ7L1W4 858 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 CYFIP1Q7L576 1253 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 MICU3Q86XE3 530 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 TMTC2Q8N394 836 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 SMARCC2Q8TAQ2 1214 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 CAGE1Q8TC20 777 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 AFAP1L1Q8TED9 768 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 INPP4AQ96PE3 977 aaPredicted RBP13.12□□□□□ -0.31
LINC00649-218ENST00000620580 GAS2L1Q99501 681 aaPredicted RBP13.12□□□□□ -0.31
LINC00649-218ENST00000620580 LZTS2Q9BRK4 669 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 KATNAL1Q9BW62 490 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 CERS4Q9HA82 394 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 SEC63Q9UGP8 760 aaKnown RBP13.12□□□□□ -0.31
LINC00649-218ENST00000620580 PCDHA11Q9Y5I1 949 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 SLC12A7Q9Y666 1083 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 TANC1Q9C0D5 1861 aa13.12□□□□□ -0.31
LINC00649-218ENST00000620580 LGALS2P05162 132 aa13.11□□□□□ -0.31
LINC00649-218ENST00000620580 CA3P07451 260 aa13.11□□□□□ -0.31
LINC00649-218ENST00000620580 ICAM3P32942 547 aa13.11□□□□□ -0.31
LINC00649-218ENST00000620580 GNAQP50148 359 aa13.11□□□□□ -0.31
LINC00649-218ENST00000620580 SP4Q02446 784 aa13.11□□□□□ -0.31
LINC00649-218ENST00000620580 MBTPS1Q14703 1052 aa13.11□□□□□ -0.31
LINC00649-218ENST00000620580 UBE2SQ16763 222 aa13.11□□□□□ -0.31
LINC00649-218ENST00000620580 ADCK5Q3MIX3 580 aa13.11□□□□□ -0.31
LINC00649-218ENST00000620580 ZNF618Q5T7W0 954 aa13.11□□□□□ -0.31
LINC00649-218ENST00000620580 TMTC3Q6ZXV5 915 aa13.11□□□□□ -0.31
LINC00649-218ENST00000620580 SPRED2Q7Z698 418 aa13.11□□□□□ -0.31
LINC00649-218ENST00000620580 CCDC155Q8N6L0 562 aa13.11□□□□□ -0.31
LINC00649-218ENST00000620580 FANCBQ8NB91 859 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms