RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 RBM8AQ9Y5S9 174 aaKnown RBP25.58■■□□□ 1.69
SRRT-218ENST00000620394 CYTH3O43739 400 aa25.57■■□□□ 1.68
SRRT-218ENST00000620394 PARNO95453 639 aaKnown RBP25.57■■□□□ 1.68
SRRT-218ENST00000620394 CFBP00751 764 aa25.57■■□□□ 1.68
SRRT-218ENST00000620394 ARHGEF16Q5VV41 709 aa25.57■■□□□ 1.68
SRRT-218ENST00000620394 PCDHA1Q9Y5I3 950 aa25.57■■□□□ 1.68
SRRT-218ENST00000620394 GH1P01241 217 aa25.56■■□□□ 1.68
SRRT-218ENST00000620394 NR3C2P08235 984 aa25.56■■□□□ 1.68
SRRT-218ENST00000620394 MMP3P08254 477 aa25.56■■□□□ 1.68
SRRT-218ENST00000620394 EIF2AK2P19525 551 aaKnown RBP25.56■■□□□ 1.68
SRRT-218ENST00000620394 SEPT14Q6ZU15 432 aa25.56■■□□□ 1.68
SRRT-218ENST00000620394 IGDCC4Q8TDY8 1250 aa25.56■■□□□ 1.68
SRRT-218ENST00000620394 EMID1Q96A84 441 aaPredicted RBP25.56■■□□□ 1.68
SRRT-218ENST00000620394 MTA3Q9BTC8 594 aa25.56■■□□□ 1.68
SRRT-218ENST00000620394 MYH7BA7E2Y1 1941 aa25.56■■□□□ 1.68
SRRT-218ENST00000620394 EIF3JO75822 258 aaKnown RBP25.55■■□□□ 1.68
SRRT-218ENST00000620394 SELPP16109 830 aa25.55■■□□□ 1.68
SRRT-218ENST00000620394 RBL2Q08999 1139 aa25.55■■□□□ 1.68
SRRT-218ENST00000620394 TRAF1Q13077 416 aa25.55■■□□□ 1.68
SRRT-218ENST00000620394 LY6KQ17RY6 165 aa25.55■■□□□ 1.68
SRRT-218ENST00000620394 CNKSR3Q6P9H4 555 aa25.55■■□□□ 1.68
SRRT-218ENST00000620394 LRRC8DQ7L1W4 858 aa25.55■■□□□ 1.68
SRRT-218ENST00000620394 SPRED2Q7Z698 418 aa25.55■■□□□ 1.68
SRRT-218ENST00000620394 GDPD5Q8WTR4 605 aa25.55■■□□□ 1.68
SRRT-218ENST00000620394 AFG1LQ8WV93 481 aa25.55■■□□□ 1.68
SRRT-218ENST00000620394 PIGSQ96S52 555 aa25.55■■□□□ 1.68
SRRT-218ENST00000620394 PDCD2LQ9BRP1 358 aa25.55■■□□□ 1.68
SRRT-218ENST00000620394 ZBED2Q9BTP6 218 aa25.55■■□□□ 1.68
SRRT-218ENST00000620394 LCHNA4D1U4 455 aa25.54■■□□□ 1.68
SRRT-218ENST00000620394 GPR37L1O60883 481 aa25.54■■□□□ 1.68
SRRT-218ENST00000620394 CHMP4BP1P59074 171 aa25.54■■□□□ 1.68
SRRT-218ENST00000620394 HOMER1Q86YM7 354 aa25.54■■□□□ 1.68
SRRT-218ENST00000620394 CTAGE1Q96RT6 745 aa25.54■■□□□ 1.68
SRRT-218ENST00000620394 MAP3K14Q99558 947 aa25.54■■□□□ 1.68
SRRT-218ENST00000620394 LSG1Q9H089 658 aaKnown RBP25.54■■□□□ 1.68
SRRT-218ENST00000620394 DDX41Q9UJV9 622 aaKnown RBP25.54■■□□□ 1.68
SRRT-218ENST00000620394 BRWD1Q9NSI6 2320 aa25.54■■□□□ 1.68
SRRT-218ENST00000620394 GDF6Q6KF10 455 aaPredicted RBP25.53■■□□□ 1.68
SRRT-218ENST00000620394 CHST3Q7LGC8 479 aa25.53■■□□□ 1.68
SRRT-218ENST00000620394 PNMA6FA0A0J9YX94 578 aa25.52■■□□□ 1.68
SRRT-218ENST00000620394 EFCAB14O75071 495 aa25.52■■□□□ 1.68
SRRT-218ENST00000620394 RGS20O76081 388 aa25.52■■□□□ 1.68
SRRT-218ENST00000620394 CXCL10P02778 98 aa25.52■■□□□ 1.68
SRRT-218ENST00000620394 DEFB103AP81534 67 aa25.52■■□□□ 1.68
SRRT-218ENST00000620394 CATIPQ7Z7H3 387 aa25.52■■□□□ 1.68
SRRT-218ENST00000620394 LY9Q9HBG7 655 aa25.52■■□□□ 1.68
SRRT-218ENST00000620394 C11orf16Q9NQ32 467 aa25.52■■□□□ 1.68
SRRT-218ENST00000620394 FRMPD4Q14CM0 1322 aa25.52■■□□□ 1.68
SRRT-218ENST00000620394 ABHD14A-ACY1A0A1B0GW23 586 aa25.51■■□□□ 1.67
SRRT-218ENST00000620394 DDAH1O94760 285 aa25.51■■□□□ 1.67
SRRT-218ENST00000620394 GJB5O95377 273 aa25.51■■□□□ 1.67
SRRT-218ENST00000620394 HOXD8P13378 290 aaPredicted RBP25.51■■□□□ 1.67
SRRT-218ENST00000620394 HOXA13P31271 388 aaPredicted RBP25.51■■□□□ 1.67
SRRT-218ENST00000620394 PGM5Q15124 567 aa25.51■■□□□ 1.67
SRRT-218ENST00000620394 KAT2BQ92831 832 aa25.51■■□□□ 1.67
SRRT-218ENST00000620394 TGS1Q96RS0 853 aaKnown RBP25.51■■□□□ 1.67
SRRT-218ENST00000620394 ESYT1Q9BSJ8 1104 aa25.51■■□□□ 1.67
SRRT-218ENST00000620394 SPZ1Q9BXG8 430 aa25.51■■□□□ 1.67
SRRT-218ENST00000620394 GTF2IRD1Q9UHL9 959 aa25.51■■□□□ 1.67
SRRT-218ENST00000620394 MRVI1Q9Y6F6 885 aa25.51■■□□□ 1.67
SRRT-218ENST00000620394 CASTP20810 708 aaKnown RBP25.5■■□□□ 1.67
SRRT-218ENST00000620394 GPNMBQ14956 572 aa25.5■■□□□ 1.67
SRRT-218ENST00000620394 TMCO2Q7Z6W1 182 aaPredicted RBP25.5■■□□□ 1.67
SRRT-218ENST00000620394 VSIG10LQ86VR7 867 aa25.5■■□□□ 1.67
SRRT-218ENST00000620394 ZNF654Q8IZM8 581 aa25.5■■□□□ 1.67
SRRT-218ENST00000620394 IL31RAQ8NI17 732 aa25.5■■□□□ 1.67
SRRT-218ENST00000620394 PPTC7Q8NI37 304 aa25.5■■□□□ 1.67
SRRT-218ENST00000620394 DHX38Q92620 1227 aaKnown RBP25.5■■□□□ 1.67
SRRT-218ENST00000620394 KHSRPQ92945 711 aaKnown RBP eCLIP25.5■■□□□ 1.67
SRRT-218ENST00000620394 RAD9AQ99638 391 aa25.5■■□□□ 1.67
SRRT-218ENST00000620394 KATNAL1Q9BW62 490 aa25.5■■□□□ 1.67
SRRT-218ENST00000620394 UBE2ZQ9H832 354 aaPredicted RBP25.5■■□□□ 1.67
SRRT-218ENST00000620394 GCOM1H8Y6P7 765 aaPredicted RBP25.49■■□□□ 1.67
SRRT-218ENST00000620394 POLR2MP0CAP2 368 aa25.49■■□□□ 1.67
SRRT-218ENST00000620394 CKBP12277 381 aa25.49■■□□□ 1.67
SRRT-218ENST00000620394 ERVK-21P61565 698 aa25.49■■□□□ 1.67
SRRT-218ENST00000620394 LAMC2Q13753 1193 aa25.49■■□□□ 1.67
SRRT-218ENST00000620394 DGKDQ16760 1214 aa25.49■■□□□ 1.67
SRRT-218ENST00000620394 KCNV1Q6PIU1 500 aa25.49■■□□□ 1.67
SRRT-218ENST00000620394 SUGCTQ9HAC7 445 aa25.49■■□□□ 1.67
SRRT-218ENST00000620394 MTUS1Q9ULD2 1270 aa25.49■■□□□ 1.67
SRRT-218ENST00000620394 MICAL3Q7RTP6 2002 aa25.48■■□□□ 1.67
SRRT-218ENST00000620394 PI4K2BG5E9Z4 385 aa25.48■■□□□ 1.67
SRRT-218ENST00000620394 NBNO60934 754 aa25.48■■□□□ 1.67
SRRT-218ENST00000620394 F2P00734 622 aa25.48■■□□□ 1.67
SRRT-218ENST00000620394 SMARCA1P28370 1054 aa25.48■■□□□ 1.67
SRRT-218ENST00000620394 BMP2KLQ5H9B9 411 aa25.48■■□□□ 1.67
SRRT-218ENST00000620394 TMEM87BQ96K49 555 aa25.48■■□□□ 1.67
SRRT-218ENST00000620394 LINC01553A4QN01 128 aa25.47■■□□□ 1.67
SRRT-218ENST00000620394 FAM86C2PA6NEL3 165 aa25.47■■□□□ 1.67
SRRT-218ENST00000620394 SH2B2O14492 632 aaPredicted RBP25.47■■□□□ 1.67
SRRT-218ENST00000620394 SLC27A2O14975 620 aa25.47■■□□□ 1.67
SRRT-218ENST00000620394 PRC1O43663 620 aa25.47■■□□□ 1.67
SRRT-218ENST00000620394 KIF5BP33176 963 aa25.47■■□□□ 1.67
SRRT-218ENST00000620394 NECTIN1Q15223 517 aa25.47■■□□□ 1.67
SRRT-218ENST00000620394 CASC1Q6TDU7 716 aa25.47■■□□□ 1.67
SRRT-218ENST00000620394 C7orf31Q8N865 590 aa25.47■■□□□ 1.67
SRRT-218ENST00000620394 CTCFLQ8NI51 663 aaPredicted RBP25.47■■□□□ 1.67
SRRT-218ENST00000620394 HAS3O00219 553 aa25.46■■□□□ 1.67
SRRT-218ENST00000620394 TGFB3P10600 412 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms