RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 CUTAO60888 179 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 COBLO75128 1261 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 GADD45BO75293 160 aaPredicted RBP9.09□□□□□ -0.95
CPNE3-209ENST00000620393 TRPA1O75762 1119 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 EIF3JO75822 258 aaKnown RBP9.09□□□□□ -0.95
CPNE3-209ENST00000620393 STAM2O75886 525 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 TBC1D8O95759 1140 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 PGK2P07205 417 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 MYCLP12524 364 aaPredicted RBP9.09□□□□□ -0.95
CPNE3-209ENST00000620393 ADORA2AP29274 412 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 CCND2P30279 289 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 ALDH5A1P51649 535 aaPredicted RBP9.09□□□□□ -0.95
CPNE3-209ENST00000620393 UBE2HP62256 183 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 GRB14Q14449 540 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 PWP2Q15269 919 aaKnown RBP9.09□□□□□ -0.95
CPNE3-209ENST00000620393 IL17AQ16552 155 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 CALCRLQ16602 461 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 ZNF792Q3KQV3 632 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 PRR16Q569H4 304 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 DTHD1Q6ZMT9 781 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 DPP9Q86TI2 863 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 IL31RAQ8NI17 732 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 HAS1Q92839 578 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 LENG9Q96B70 501 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 FAM20AQ96MK3 541 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 JADE2Q9NQC1 790 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 FBXO2Q9UK22 296 aaPredicted RBP9.09□□□□□ -0.95
CPNE3-209ENST00000620393 GJD2Q9UKL4 321 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 MRVI1Q9Y6F6 885 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 A0A1W2PQ27 194 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 A0A1W2PQ64 194 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 A0A1W2PQD8 194 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 MSH4O15457 936 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 MARCH6O60337 910 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 OR52Z1P0C646 297 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 ITGB5P18084 799 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 CMA1P23946 247 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 EDNRBP24530 442 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 SP3Q02447 781 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 PDIA5Q14554 519 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 STXBP2Q15833 593 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 MORN1Q5T089 497 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 PLA2G4DQ86XP0 818 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 ETNPPLQ8TBG4 499 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 MORC4Q8TE76 937 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 USP6NLQ92738 828 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 FGD4Q96M96 766 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 CLIC6Q96NY7 704 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 MPHOSPH6Q99547 160 aaKnown RBP9.08□□□□□ -0.96
CPNE3-209ENST00000620393 KCNMB3Q9NPA1 279 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 SLC5A4Q9NY91 659 aa9.08□□□□□ -0.96
CPNE3-209ENST00000620393 ASTN1O14525 1302 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 VWA3AA6NCI4 1184 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 ASB14A6NK59 587 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 SPATA31C2B4DYI2 1134 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 TNPO2O14787 897 aaKnown RBP9.07□□□□□ -0.96
CPNE3-209ENST00000620393 HOXC6P09630 235 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 ARP10275 920 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 CTGFP29279 349 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 ICAM3P32942 547 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 LONP1P36776 959 aaKnown RBP9.07□□□□□ -0.96
CPNE3-209ENST00000620393 TXKP42681 527 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 PSMC4P43686 418 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 FCGRTP55899 365 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 LACTBP83111 547 aaPredicted RBP9.07□□□□□ -0.96
CPNE3-209ENST00000620393 SETQ01105 290 aaPredicted RBP9.07□□□□□ -0.96
CPNE3-209ENST00000620393 MAP2K1Q02750 393 aaPredicted RBP9.07□□□□□ -0.96
CPNE3-209ENST00000620393 GRIN1Q05586 938 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 PDE4DQ08499 809 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 MAP2K5Q13163 448 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 SHC4Q6S5L8 630 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 MAMDC4Q6UXC1 1216 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 NLRX1Q86UT6 975 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 SLFN12Q8IYM2 578 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 MSL3Q8N5Y2 521 aaKnown RBP9.07□□□□□ -0.96
CPNE3-209ENST00000620393 SLC5A5Q92911 643 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 GPRASP2Q96D09 838 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 INPP4AQ96PE3 977 aaPredicted RBP9.07□□□□□ -0.96
CPNE3-209ENST00000620393 NUDT12Q9BQG2 462 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 WDR11Q9BZH6 1224 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 CSRNP2Q9H175 543 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 TTC12Q9H892 705 aaPredicted RBP9.07□□□□□ -0.96
CPNE3-209ENST00000620393 KCNH7Q9NS40 1196 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 SAGE1Q9NXZ1 904 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 PCDHA12Q9UN75 941 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 SMCHD1A6NHR9 2005 aa9.07□□□□□ -0.96
CPNE3-209ENST00000620393 MYH6P13533 1939 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 FAM237AA0A1B0GTK4 181 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 GPR25O00155 361 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 RGS20O76081 388 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 TECP42680 631 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 MTMR1Q13613 665 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 KIF22Q14807 665 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 SKOR2Q2VWA4 1001 aaPredicted RBP9.06□□□□□ -0.96
CPNE3-209ENST00000620393 GNPTABQ3T906 1256 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 RESP18Q5W5W9 173 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 SPNS2Q8IVW8 549 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 DNAJC5GQ8N7S2 189 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 IGSF22Q8N9C0 903 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 NPLOC4Q8TAT6 608 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms