RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 MAPK8IP1Q9UQF2 711 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 JRKLQ9Y4A0 524 aa7.76□□□□□ -1.17
SRGAP3-213ENST00000618999 ENC1O14682 589 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 MATR3P43243 847 aaKnown RBP eCLIP7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 CCDC96Q2M329 555 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 TTC38Q5R3I4 469 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 ICE2Q659A1 982 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 TMTC3Q6ZXV5 915 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 STAG2Q8N3U4 1231 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 PAGE5Q96GU1 130 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 EPSTI1Q96J88 318 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 ALS2CR12Q96Q35 445 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 IDI2Q9BXS1 227 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 FHDC1Q9C0D6 1143 aaPredicted RBP7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 ZNF70Q9UC06 446 aaPredicted RBP7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 RAB21Q9UL25 225 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 HSF2BPO75031 334 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 TACC1O75410 805 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 GDF11O95390 407 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 BMP6P22004 513 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 RDXP35241 583 aaKnown RBP7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 MTIF2P46199 727 aaKnown RBP7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 KRT31Q15323 416 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 SRBD1Q8N5C6 995 aaKnown RBP7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 CCDC17Q96LX7 622 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 CPVLQ9H3G5 476 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 PLEKHA4Q9H4M7 779 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 LCMT1Q9UIC8 334 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 LRRC37AA6NMS7 1700 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 LAMA4Q16363 1823 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 MACROD2A1Z1Q3 448 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 ANKRD33BA6NCL7 494 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 KLRF2D3W0D1 207 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 COBLO75128 1261 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 NDUFA10O95299 355 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 GRIN1Q05586 938 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 IKQ13123 557 aaPredicted RBP7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 UBA5Q9GZZ9 404 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 TCP11L1Q9NUJ3 509 aa7.75□□□□□ -1.17
SRGAP3-213ENST00000618999 ANKRD65E5RJM6 399 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 PRPF3O43395 683 aaKnown RBP7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 ACTN4O43707 911 aaKnown RBP7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 ENTPD3O75355 529 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 ERLIN2O94905 339 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 TTLL1O95922 423 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 SHMT1P34896 483 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 FXR1P51114 621 aaKnown RBP eCLIP7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 NBPF9Q3BBW0 867 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 TBC1D10BQ4KMP7 808 aaPredicted RBP7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 MIGA2Q7L4E1 593 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 FAM114A1Q8IWE2 563 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 GPATCH11Q8N954 259 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 MICAL1Q8TDZ2 1067 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 DHX38Q92620 1227 aaKnown RBP7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 CCDC42Q96M95 316 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 UBXN6Q9BZV1 441 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 GOPCQ9HD26 462 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 MTMR4Q9NYA4 1195 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 FRMPD2Q68DX3 1309 aaPredicted RBP7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 BAZ2BQ9UIF8 2168 aaKnown RBP7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 ROBO3Q96MS0 1386 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 GOLGA6L10A6NI86 522 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 CASP1P29466 404 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 MCM7P33993 719 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 UBA7P41226 1012 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 GMPSP49915 693 aaPredicted RBP7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 GABPAQ06546 454 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 NT5DC1Q5TFE4 455 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 MICALCLQ6ZW33 695 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 SAMD7Q7Z3H4 446 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 HEATR3Q7Z4Q2 680 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 TMEM106CQ9BVX2 250 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 VIPAS39Q9H9C1 493 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 MYOZ2Q9NPC6 264 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 ITIH6Q6UXX5 1313 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 A0A087WUV0 522 aaPredicted RBP7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 H7C1D1 291 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 FANCGO15287 622 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 GYPCP04921 128 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 TNNI2P48788 182 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 PPFIA1Q13136 1202 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 MFSD10Q14728 455 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 ABCB5Q2M3G0 1257 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 USP49Q70CQ1 688 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 CNPY4Q8N129 248 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 NOA1Q8NC60 698 aaKnown RBP7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 GMLQ99445 158 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 TSGA10Q9BZW7 698 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 LUC7LQ9NQ29 371 aaKnown RBP7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 SEC63Q9UGP8 760 aaKnown RBP7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 CNOT7Q9UIV1 285 aaKnown RBP7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 RWDD2AQ9UIY3 292 aa7.74□□□□□ -1.17
SRGAP3-213ENST00000618999 USP17L5A8MUK1 530 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 SCG2P13521 617 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 CCT5P48643 541 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 SARSP49591 514 aaKnown RBP7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 USP14P54578 494 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 SEPT2Q15019 361 aa7.73□□□□□ -1.17
SRGAP3-213ENST00000618999 POTEDQ86YR6 584 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms